FFCP PHASE1:Hg19::chr11:207734..207745,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60626 | |EntrezGene=60626 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29550 | |HGNC=29550 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=223bp_to_ENST00000526104_5end | |association_with_transcript=223bp_to_ENST00000526104_5end | ||
|cluster_id=chr11:207734..207745,+ | |||
|coexpression_cluster_id=C3131 | |||
|description=CAGE_peak_7_at_RIC8A_5end | |description=CAGE_peak_7_at_RIC8A_5end | ||
|id=chr11:207734..207745,+ | |id=chr11:207734..207745,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.29e-12!140;CL:0002057!7.43e-11!42;CL:0000037!7.47e-11!172;CL:0000566!7.47e-11!172;CL:0000988!8.36e-11!182;CL:0000766!1.79e-10!76;CL:0000860!3.54e-10!45;CL:0000723!2.48e-09!436;CL:0000034!3.33e-09!444;CL:0002032!3.59e-09!165;CL:0000837!3.59e-09!165;CL:0000048!4.34e-09!430;CL:0002031!8.55e-09!124;CL:0000003!2.04e-08!722;CL:0002087!2.59e-08!119;CL:0000134!3.84e-08!358;CL:0000557!4.38e-08!71;CL:0002393!4.87e-08!9;CL:0002397!4.87e-08!9;CL:0000763!7.95e-08!112;CL:0000049!7.95e-08!112;CL:0000839!2.13e-07!70;CL:0002320!3.51e-07!365;CL:0002009!4.23e-07!65;CL:0000063!5.17e-07!578;CL:0000144!8.16e-07!625 | |ontology_enrichment_celltype=CL:0000738!1.29e-12!140;CL:0002057!7.43e-11!42;CL:0000037!7.47e-11!172;CL:0000566!7.47e-11!172;CL:0000988!8.36e-11!182;CL:0000766!1.79e-10!76;CL:0000860!3.54e-10!45;CL:0000723!2.48e-09!436;CL:0000034!3.33e-09!444;CL:0002032!3.59e-09!165;CL:0000837!3.59e-09!165;CL:0000048!4.34e-09!430;CL:0002031!8.55e-09!124;CL:0000003!2.04e-08!722;CL:0002087!2.59e-08!119;CL:0000134!3.84e-08!358;CL:0000557!4.38e-08!71;CL:0002393!4.87e-08!9;CL:0002397!4.87e-08!9;CL:0000763!7.95e-08!112;CL:0000049!7.95e-08!112;CL:0000839!2.13e-07!70;CL:0002320!3.51e-07!365;CL:0002009!4.23e-07!65;CL:0000063!5.17e-07!578;CL:0000144!8.16e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000094;2.11e-18;8!CL:0000081;8.12e-17;11!CL:0000624;1.78e-13;6!CL:0002393;4.08e-13;6!CL:0002397;4.08e-13;6!CL:0000766;4.93e-11;69!CL:0000623;7.59e-11;3!CL:0000791;2.03e-10;18!CL:0000789;2.03e-10;18!CL:0002419;2.03e-10;18!CL:0000226;4.33e-10;3!CL:0000842;4.33e-10;3!CL:0000875;1.50e-09;3!CL:0000767;1.50e-09;3!CL:0002396;1.50e-09;3!CL:0002087;1.07e-08;104!CL:0000576;1.97e-08;48!CL:0000738;2.63e-08;136!CL:0000771;6.14e-08;2!CL:0001014;3.06e-07;2!CL:0001016;3.06e-07;2!CL:0000084;4.37e-07;25!CL:0000542;8.26e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.70e-39,136;CL:0000037,3.21e-29,168;CL:0000988,1.50e-28,177;CL:0002032,8.77e-25,161;CL:0000837,8.77e-25,161;CL:0002031,6.17e-24,120;CL:0002087,4.31e-22,115;CL:0000766,2.02e-21,72;CL:0002393,3.43e-21,9;CL:0002397,3.43e-21,9;CL:0000094,1.35e-18,8;CL:0000081,7.14e-17,11;CL:0000763,1.34e-14,108;CL:0000049,1.34e-14,108;CL:0000860,1.96e-14,42;CL:0002057,1.96e-14,42;CL:0000557,3.42e-14,67;CL:0000624,1.45e-13,6;CL:0000134,2.26e-13,354;CL:0002320,7.27e-13,361;CL:0000473,3.84e-12,48;CL:0000234,3.84e-12,48;CL:0000219,7.96e-12,386;CL:0000839,1.86e-11,66;CL:0002009,3.02e-11,61;CL:0000623,7.77e-11,3;CL:0000825,7.77e-11,3;CL:0000791,1.86e-10,18;CL:0000789,1.86e-10,18;CL:0002420,1.86e-10,18;CL:0002419,1.86e-10,18;CL:0000790,1.86e-10,18;CL:0000838,2.84e-10,52;CL:0000048,3.32e-10,427;CL:0000034,3.91e-10,441;CL:0000226,4.93e-10,3;CL:0000842,4.93e-10,3;CL:0000542,5.20e-10,53;CL:0000051,5.20e-10,53;CL:0000723,6.97e-10,433;CL:0000875,9.06e-10,3;CL:0002396,9.06e-10,3;CL:0000767,9.33e-10,3;CL:0002194,5.82e-09,59;CL:0000576,5.82e-09,59;CL:0000040,5.82e-09,59;CL:0000559,5.82e-09,59;CL:0000771,6.07e-08,2;CL:0001014,3.48e-07,2;CL:0001016,3.48e-07,2;CL:0000084,4.11e-07,25;CL:0000827,4.11e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;2.03e-10;18!CL:0002057;5.86e-10;42!CL:0000051;8.26e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.74e-08!86;UBERON:0002390!3.89e-08!102;UBERON:0003061!3.89e-08!102;UBERON:0002371!7.22e-08!80;UBERON:0002193!3.31e-07!112;UBERON:0004765!3.33e-07!101;UBERON:0001434!3.33e-07!101;UBERON:0002384!7.54e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.27e-14,98;UBERON:0003061,7.27e-14,98;UBERON:0002384,3.57e-12,371;UBERON:0002193,5.40e-12,108;UBERON:0002371,6.43e-12,76;UBERON:0001474,1.10e-10,82;UBERON:0002405,5.60e-10,93;UBERON:0004765,2.66e-09,90;UBERON:0001434,6.75e-08,100 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,1.22866968250754,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.246242116153576,0,0,0,0.136874425072884,0,0,0,0,3.14691421479123,1.91914699048606,1.39334510984468,0.919421224478927,0.90361775633475,0,0.619737604642413,0,0.293600439334847,6.64794490238253,0.802177789880567,4.55722828503289,0,0,0,0.145398238779565,0.755751887377619,0.242584061187816,0,0,0.929119112685311,0,0.256160706529101,0.945928919554341,0,0,1.35426486594342,0.941211697713023,0,0.674170453335254,0,0.962787081228281,1.91801137739712,0,0.199463657621632,0.426224750532694,0,1.13477044938228,0,0.502497330513487,1.5644487552606,0.868755378820466,0.605399502633369,1.10483290796269,1.26584954976354,3.16882929467913,1.70083439972035,2.72556239160889,3.48218756554135,2.55300717830561,0.48217676009124,3.70516566863623,1.59133341759272,1.64397738388171,0,0,0,1.70692089026603,0,0,0,0,1.70763890732835,1.17447437874188,3.82273228125229,0,1.68152568894461,0,6.68813218387032,1.57204305099666,11.1024809459735,0.334372990781356,4.56291173287027,0.946895611469467,1.94826728407911,0.222820913770347,0.589211814949674,0.221533894583621,0.270803863765016,0.128091319725675,0.390178042679635,0,0.552700035571697,0,5.19002971067211,0.535081656179426,0,0,5.3650869104269,3.09264700934367,0.759059076058509,0,0,0,0.150575119077773,0,0,0,0.821127996921047,24.1928091869679,4.27904313253612,8.68946423296794,0,0.670700859703636,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0,0,0.263504357079378,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0.56530794192401,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0,0.22452937262617,0,0,0,0.183201743930407,14.495845917967,15.511210565933,0,0.496971951695318,0.379891534993739,0.794455084879313,0.286836620748814,0.709336764396714,0,2.1349799145941,0.24666754841716,0,0,0.326923806226917,0.302714855289863,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0.103325781175765,1.18800285728205,0,0,0,0,0,0.277064115484183,0,0,0,0.226864366320042,0,0.213557388818567,0,0.300091096084402,0.412210116953756,0.772921620136887,0,1.0126579934476,0.389748020644795,0.504867548488229,0.0920498986422993,0.161646056818812,0,0.201504196455281,0,0,0,0,0.243947412259191,0,0,0,0.252320850875628,0,0,0,1.38134921352481,0,0,0,0.337169380156203,0,0.330881918197182,0.217879444092406,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,1.32438929824395,0.245976877086227,0.514703430895577,0.329250856225877,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.352226082707465,0,0.462985512576611,0.190254152234598,0.790204397959275,0,0.246217006087397,0,0,0.93733833986777,0.839910640994298,0.141775097242386,0.0895585227028483,0.290633938513962,0,0.492663237895943,0,2.69526550203004,2.59415916150531,1.8936365013957,0.190493682876507,0,0,1.71072446022705,0.102827492703324,0,0.285826432630578,0.112131084345361,0.43596006883328,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0.799266537048298,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.821905290201534,0.179060963239896,0,14.1862147345388,4.52817907204986,9.11235557586213,0,0,0.773288812777695,0.167516265334349,0,1.49801404789436,0,4.14415513436035,0,0,0,0,0,0,0,0.300946099727719,0,1.03473071292505,1.32845119707087,0.184369168541703,0.0868836144680828,0,0,1.24060815673732,6.90285442619574,3.52200940751366,0.303127571446259,0,0,0.744323423456331,0.306923946576125,0,0.256278298511402,0,0.482561763430822,0,0.462629081407967,0.355123450626254,0.246381468041427,0,0,0.362578348774867,0.40101294060657,0,0.459257792658427,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.527758144464379,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0,0.261435451024901,0,0.328014645699706,0,0,0,0.165018999841176,0.574265537996172,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.426133137080504,0.267096106940212,0.165284915360978,0.384380134730212,0.638063562472921,0.2023155617111,0,1.25924938732256,0,0,0,0,0,0.572499546967965,0.744316738719335,0,0.38126038784765,0.255897791311334,0,0.318203247925937,1.56989728039846,0.359744915166629,0,0,0.808729926293264,0,0,0,0,0,0,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.563391205064483,0.143411352204052,0,0.35667105148125,0,0.211107635297664,0,0,0,0.0962221127255121,0,1.08890984861323,0,0.43050537267123,1.68471475667626,0.443430153536676,0,1.01489521846434,0,0,0,0.411362273086194,0,0.540031437238115,0,0.640944426764839,0,0,0.371606350251437,0,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0,0,0.677167111206413,0.1605880751037,0,0,0,0.307240764308458,0,0.333698283423817,0.19538809540204,0,0,0.540911356951966,0,0,0.18714054040822,0,0,0,0,0.47748896947538,0,0.307160702099232,0.994147647766298,0,0.222617410045812,0.494411622680279,0,0.996239941255349,0,0,0,0.123084805461069,0,0,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| ||
|short_description=p7@RIC8A | |short_description=p7@RIC8A | ||
}} | }} |
Latest revision as of 07:20, 17 September 2015
Short description: | p7@RIC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RIC8A_5end |
Coexpression cluster: | C3131_CD8_Natural_Peripheral_CD4_Eosinophils_CD14_Basophils |
Association with transcript: | 223bp_to_ENST00000526104_5end |
EntrezGene: | RIC8A |
HGNC: | 29550 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.27e-14 | 98 |
blood island | 7.27e-14 | 98 |
connective tissue | 3.57e-12 | 371 |
hemolymphoid system | 5.40e-12 | 108 |
bone marrow | 6.43e-12 | 76 |
bone element | 1.10e-10 | 82 |
immune system | 5.60e-10 | 93 |
skeletal element | 2.66e-09 | 90 |
skeletal system | 6.75e-08 | 100 |