FFCP PHASE1:Hg19::chr9:36400830..36400852,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152006 | |EntrezGene=152006 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18052 | |HGNC=18052 | ||
|TSSclassifier=strong | |||
|UniProt=B1AM81 | |UniProt=B1AM81 | ||
|association_with_transcript=18bp_to_ENST00000377877_5end | |association_with_transcript=18bp_to_ENST00000377877_5end | ||
|cluster_id=chr9:36400830..36400852,- | |||
|description=CAGE_peak_5_at_RNF38_5end | |description=CAGE_peak_5_at_RNF38_5end | ||
|id=chr9:36400830..36400852,- | |id=chr9:36400830..36400852,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.96e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.31e-07,52;CL:0000542,2.66e-07,53;CL:0000051,2.66e-07,53;CL:0000094,4.30e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@RNF38 | |short_description=p5@RNF38 | ||
}} | }} |
Latest revision as of 09:49, 17 September 2015
Short description: | p5@RNF38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RNF38_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000377877_5end |
EntrezGene: | RNF38 |
HGNC: | 18052 |
UniProt: | B1AM81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.31e-07 | 52 |
lymphocyte | 2.66e-07 | 53 |
common lymphoid progenitor | 2.66e-07 | 53 |
granulocyte | 4.30e-07 | 8 |