FFCP PHASE1:Hg19::chr10:17659306..17659317,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9200 | |EntrezGene=9200 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9639 | |HGNC=9639 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-72bp_to_ENST00000466335_5end | |association_with_transcript=-72bp_to_ENST00000466335_5end | ||
|cluster_id=chr10:17659306..17659317,- | |||
|coexpression_cluster_id=C3003 | |||
|description=CAGE_peak_3_at_PTPLA_5end | |description=CAGE_peak_3_at_PTPLA_5end | ||
|id=chr10:17659306..17659317,- | |id=chr10:17659306..17659317,- | ||
|ontology_enrichment_celltype=CL:0000055!2.90e-15!180;CL:0000012!1.58e-11!682;CL:0002321!2.87e-11!248;CL:0000220!3.83e-11!246;CL:0000548!4.54e-11!679;CL:0000004!4.54e-11!679;CL:0000255!4.54e-11!679;CL:0000144!1.01e-08!625;CL:0000057!1.28e-08!75;CL:0000222!1.48e-08!119;CL:0000077!2.28e-08!19;CL:0000066!2.60e-08!254;CL:0000213!2.88e-07!57;CL:0000215!2.88e-07!57 | |ontology_enrichment_celltype=CL:0000055!2.90e-15!180;CL:0000012!1.58e-11!682;CL:0002321!2.87e-11!248;CL:0000220!3.83e-11!246;CL:0000548!4.54e-11!679;CL:0000004!4.54e-11!679;CL:0000255!4.54e-11!679;CL:0000144!1.01e-08!625;CL:0000057!1.28e-08!75;CL:0000222!1.48e-08!119;CL:0000077!2.28e-08!19;CL:0000066!2.60e-08!254;CL:0000213!2.88e-07!57;CL:0000215!2.88e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.55e-09;19!CL:0002620;3.72e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.26e-09,19;CL:0000057,1.49e-07,76;CL:0002620,7.93e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.39e-07!143;UBERON:0002100!2.90e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=2.72517568905835,4.49611100171065,3.24195129420734,5.00366491765652,2.68176656656373,1.74467704820074,0,0.631719873426831,0.783556884599516,1.72013755551056,2.09340350391728,1.52908960491121,1.31883489114227,0.247532705920093,0.662794751455832,0.672325146451775,0.602694528023977,2.19093027116212,0.975865597581014,3.44738962615006,2.44800829493104,1.56727360739044,1.14494394852423,1.09499540058307,1.88313959392204,0,0,0,0.393364276848904,0,0,0,0.6024118375565,0.369754010166788,0,0,4.9912074686924,0,0.200544447470142,0,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0.619412741790207,0,0.256160706529101,0,0.689491361473237,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.48406850385229,2.10707267820062,0,0,0.411202997999018,0,0,0,0,0.111410456885174,1.76763544484902,3.32300841875432,1.35401931882508,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0.267440195783507,0,0,0.670700859703636,0.12786256184353,2.53007406669196,1.00267582127178,1.44846518960824,0,0.486634870302636,0.850813354476611,1.55210578223795,1.66886092816939,0.327447688744282,0.728590576585084,0,1.9472843619281,1.0447784237956,0.930705723632056,0,0,0,0.39752481473341,4.30117297553062,0.347140501607594,0.56530794192401,0.838998872419812,1.10047216776027,1.04497483268405,1.29208379584664,0.35576626268671,0.33472061276467,0.805658634218294,2.28081631715554,1.70843440283719,2.57364156242108,0.81014194788176,0.982297011124877,0.673588117878509,0.900891843866578,0,0.949265659568129,0.366403487860815,0,0,1.74437620857014,1.98788780678127,0.379891534993739,1.32409180813219,0.286836620748814,1.41867352879343,0.560677600142307,3.20246987189115,3.45334567784024,0.933633106199299,0.67355336034844,0.490385709340376,0.908144565869588,0.576175924479999,1.87457145467037,1.24864030732128,1.1409436430889,1.19558944441441,0.939475989150119,1.61872944368132,1.40450806702248,1.83738754129404,1.84251475967652,0.206651562351531,1.18800285728205,1.48360157567134,0.910161361938026,1.43723628363248,1.5150250255866,0.250237039743928,1.6623846929051,2.63386572528503,4.90380473278431,3.60571341375832,1.24775401476023,3.04962380671065,1.2813443329114,2.33125091275518,6.00182192168805,2.26715564324566,1.8034837803194,2.97786970130544,3.20675031258406,3.21542117031955,0.757301322732344,1.38074847963449,0,9.23024940543197,6.7503905812519,4.91725717700414,0.193260853163297,0.545492241181669,0.573609190778008,0.731842236777572,1.06023814657188,0.813357600086629,0.518305275076852,1.00928340350251,1.82488679537915,1.56449532329816,5.78916844373597,2.76269842704961,0.464367928031979,2.88751792667834,1.77460200059766,1.85443159085912,2.41011029883482,1.98529150918309,1.30727666455444,1.89816495288877,2.02246962240247,1.37355025587742,2.30848294167834,3.69077727312324,4.20725321410337,2.8810180793198,1.47008711385542,0,0,0,0.441463099414651,0.491953754172454,2.05881372358231,0.878002283269004,0,0.502644862058154,0.185176890317059,1.62904152655162,2.07986957055916,0,0.695582429850461,1.6437217193015,1.73239737313289,1.38895653772983,0,1.58040879591855,1.71697232418975,0.246217006087397,0,0.445893486866185,0.93733833986777,1.6798212819886,1.27597587518148,0.716468181622786,0.581267877027924,1.15014803749563,0.985326475791887,2.64145302039678,1.65862492432618,0.864719720501769,1.38866676769018,1.90493682876507,2.67391897890794,4.68869788840188,3.4214489204541,2.15937734676979,6.60754727256618,4.0015700568281,2.35475277125258,0.43596006883328,2.12681028880755,2.58543431515556,3.57656445851882,1.690605505112,4.5209479819428,9.36066932202295,1.02882949704857,2.83698264046557,2.39779961114489,0.57191197463259,3.7983512377401,2.46972101034231,0.325736184293735,0.710783897485092,3.16780749173372,4.82303003295338,4.35766729300147,5.29856853264902,0,0,0,5.27174682081482,2.29723871668228,0,4.48822050669496,1.84928690295345,4.65558504423729,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0.542530047399471,2.49565033836969,2.85486382075459,3.15404830067869,0.702848489956279,0,0,3.10419213877515,1.32845119707087,1.29058417979192,0.695068915744663,1.17480694477644,1.71571711905428,0.620304078368662,0.215714200818617,0,0.303127571446259,0,0,0.992431231275107,1.2276957863045,1.96462066103151,1.79394808957981,8.18731598506726,3.86049410744658,1.48418066444991,0.154209693802656,0.355123450626254,0.821271560138091,0,0.464841513839837,0.966875596732978,1.80455823272956,0.184161977871793,1.83703117063371,0.728364672026868,0.917870904715969,2.25599806453706,0.385076685522074,0.784349769176855,2.92278449306521,0.422206515571503,1.13733384070897,2.89159298970077,2.37507507712353,6.16909010761157,2.70946437543853,2.50844886927427,0.764628819135115,0.831076008928724,1.34324852833307,0,0.522870902049801,1.02580050046556,7.87235149679294,1.30151357865721,0,3.113361803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| ||
|short_description=p3@PTPLA | |short_description=p3@PTPLA | ||
}} | }} |
Latest revision as of 11:27, 17 September 2015
Short description: | p3@PTPLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTPLA_5end |
Coexpression cluster: | C3003_mesothelioma_heart_basal_Fibroblast_Melanocyte_Mesenchymal_Retinal |
Association with transcript: | -72bp_to_ENST00000466335_5end |
EntrezGene: | PTPLA |
HGNC: | 9639 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.26e-09 | 19 |
fibroblast | 1.49e-07 | 76 |
skin fibroblast | 7.93e-07 | 23 |