FFCP PHASE1:Hg19::chr1:31218995..31219006,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7805 | |EntrezGene=7805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29612 | |HGNC=29612 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=69bp_to_ENST00000464569_5end | |association_with_transcript=69bp_to_ENST00000464569_5end | ||
|cluster_id=chr1:31218995..31219006,- | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_8_at_LAPTM5_5end | |description=CAGE_peak_8_at_LAPTM5_5end | ||
|id=chr1:31218995..31219006,- | |id=chr1:31218995..31219006,- | ||
|ontology_enrichment_celltype=CL:0000945!8.43e-17!24;CL:0000826!8.43e-17!24;CL:0000785!5.81e-14!2;CL:0000955!5.81e-14!2;CL:0000818!5.81e-14!2;CL:0000954!5.81e-14!2;CL:0000816!5.81e-14!2;CL:0000542!9.66e-11!53;CL:0000051!9.66e-11!53;CL:0000817!1.32e-09!3;CL:0000838!6.42e-09!52;CL:0000946!4.35e-08!1;CL:0000786!4.35e-08!1;CL:0000980!4.35e-08!1;CL:0000819!1.44e-07!1 | |ontology_enrichment_celltype=CL:0000945!8.43e-17!24;CL:0000826!8.43e-17!24;CL:0000785!5.81e-14!2;CL:0000955!5.81e-14!2;CL:0000818!5.81e-14!2;CL:0000954!5.81e-14!2;CL:0000816!5.81e-14!2;CL:0000542!9.66e-11!53;CL:0000051!9.66e-11!53;CL:0000817!1.32e-09!3;CL:0000838!6.42e-09!52;CL:0000946!4.35e-08!1;CL:0000786!4.35e-08!1;CL:0000980!4.35e-08!1;CL:0000819!1.44e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000945;8.62e-30;24!CL:0000346;1.09e-10;3!CL:1000428;1.09e-10;3!CL:0000542;4.50e-07;53!CL:0002559;6.39e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.15e-30,24;CL:0000826,9.15e-30,24;CL:0000838,5.53e-14,52;CL:0000542,9.98e-14,53;CL:0000051,9.98e-14,53;CL:0000346,9.90e-11,3;CL:1000428,9.90e-11,3;CL:0002559,6.04e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000051;4.50e-07;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.87e-10!10;DOID:2355!4.07e-08!1;DOID:630!4.99e-08!1;DOID:0050177!4.99e-08!1;DOID:0050427!4.99e-08!1;DOID:12603!1.35e-07!1;DOID:0060073!1.44e-07!1;DOID:8675!1.44e-07!1 | |ontology_enrichment_disease=DOID:0060058!1.87e-10!10;DOID:2355!4.07e-08!1;DOID:630!4.99e-08!1;DOID:0050177!4.99e-08!1;DOID:0050427!4.99e-08!1;DOID:12603!1.35e-07!1;DOID:0060073!1.44e-07!1;DOID:8675!1.44e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:2355;3.16e-29;1!DOID:74;2.37e-15;2!DOID:1287;2.43e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,4.20e-29,1;DOID:74,2.74e-15,2;DOID:1287,2.61e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0004177!7.32e-09!7;UBERON:0002370!2.27e-07!4;UBERON:0005058!2.27e-07!4;UBERON:0009113!2.27e-07!4;UBERON:0003295!2.27e-07!4;UBERON:0005562!2.27e-07!4 | |ontology_enrichment_uberon=UBERON:0004177!7.32e-09!7;UBERON:0002370!2.27e-07!4;UBERON:0005058!2.27e-07!4;UBERON:0009113!2.27e-07!4;UBERON:0003295!2.27e-07!4;UBERON:0005562!2.27e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.09e-10;3!UBERON:0001992;1.09e-10;3!UBERON:0002073;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,9.90e-11,3;UBERON:0001992,9.90e-11,3;UBERON:0002073,6.04e-07,5;UBERON:0005086,6.04e-07,5 | |||
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|short_description=p8@LAPTM5 | |short_description=p8@LAPTM5 | ||
}} | }} |
Latest revision as of 12:19, 17 September 2015
Short description: | p8@LAPTM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LAPTM5_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | 69bp_to_ENST00000464569_5end |
EntrezGene: | LAPTM5 |
HGNC: | 29612 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.15e-30 | 24 |
pro-B cell | 9.15e-30 | 24 |
lymphoid lineage restricted progenitor cell | 5.53e-14 | 52 |
lymphocyte | 9.98e-14 | 53 |
common lymphoid progenitor | 9.98e-14 | 53 |
hair follicle dermal papilla cell | 9.90e-11 | 3 |
stem cell of epidermis | 9.90e-11 | 3 |
hair follicle cell | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 9.90e-11 | 3 |
papillary layer of dermis | 9.90e-11 | 3 |
hair follicle | 6.04e-07 | 5 |
hair follicle placode | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
anemia | 4.20e-29 | 1 |
hematopoietic system disease | 2.74e-15 | 2 |
cardiovascular system disease | 2.61e-08 | 4 |