FFCP PHASE1:Hg19::chr9:4490394..4490446,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6505 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10939 | |||
|TSSclassifier=strong | |||
|UniProt=P43005 | |||
|association_with_transcript=0bp_to_ENST00000262352,NM_004170,uc003zij.1_5end | |||
|cluster_id=chr9:4490394..4490446,+ | |||
|coexpression_cluster_id=C4823 | |||
|description=CAGE_peak_2_at_SLC1A1_5end | |||
|id=chr9:4490394..4490446,+ | |||
|ontology_enrichment_celltype=CL:0000359!3.68e-12!32;CL:0000055!1.83e-09!180;CL:0000192!4.33e-09!42;CL:0000514!4.33e-09!42;CL:0000393!1.67e-08!60;CL:0000211!1.67e-08!60;CL:0000680!2.27e-08!57;CL:0000056!2.27e-08!57;CL:0000355!2.27e-08!57;CL:0000187!1.42e-07!54;CL:0000183!4.39e-07!59;CL:0000222!4.94e-07!119;CL:0002334!5.02e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.68e-12;32!CL:0002334;5.79e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.09e-12,32;CL:0000192,2.45e-08,43;CL:0000514,2.45e-08,43;CL:0002334,6.34e-08,12;CL:0000393,2.49e-07,61;CL:0000211,2.49e-07,61;CL:0000680,3.81e-07,58;CL:0000056,3.81e-07,58;CL:0000355,3.81e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!3.17e-23!194;UBERON:0004111!1.17e-20!241;UBERON:0000477!5.43e-20!286;UBERON:0000483!4.70e-17!309;UBERON:0000119!1.06e-16!312;UBERON:0000475!1.95e-15!365;UBERON:0001637!2.26e-15!42;UBERON:0003509!2.26e-15!42;UBERON:0004572!2.26e-15!42;UBERON:0003914!5.00e-14!118;UBERON:0004573!1.79e-13!33;UBERON:0004571!1.79e-13!33;UBERON:0000481!6.06e-13!347;UBERON:0001017!2.79e-12!82;UBERON:0001981!3.98e-12!60;UBERON:0007500!3.98e-12!60;UBERON:0004537!3.98e-12!60;UBERON:0006965!3.98e-12!60;UBERON:0004872!5.02e-12!84;UBERON:0005743!6.50e-12!86;UBERON:0000073!8.85e-12!94;UBERON:0001016!8.85e-12!94;UBERON:0000490!2.73e-11!138;UBERON:0002616!4.94e-11!59;UBERON:0001049!5.51e-11!57;UBERON:0005068!5.51e-11!57;UBERON:0006241!5.51e-11!57;UBERON:0007135!5.51e-11!57;UBERON:0000055!5.58e-11!69;UBERON:0002049!6.22e-11!79;UBERON:0007798!6.22e-11!79;UBERON:0002619!1.09e-10!22;UBERON:0001869!1.65e-10!32;UBERON:0001893!1.89e-10!34;UBERON:0000955!2.13e-10!69;UBERON:0006238!2.13e-10!69;UBERON:0002020!2.22e-10!34;UBERON:0003528!2.22e-10!34;UBERON:0002780!2.27e-10!41;UBERON:0001890!2.27e-10!41;UBERON:0006240!2.27e-10!41;UBERON:0003080!3.54e-10!42;UBERON:0002791!5.10e-10!33;UBERON:0001950!6.71e-10!20;UBERON:0002100!1.26e-09!216;UBERON:0000468!1.53e-09!659;UBERON:0000480!3.16e-09!626;UBERON:0000467!4.09e-09!625;UBERON:0005256!9.62e-09!143;UBERON:0003075!2.74e-08!86;UBERON:0007284!2.74e-08!86;UBERON:0002346!3.71e-08!90;UBERON:0000956!3.75e-08!25;UBERON:0000203!3.75e-08!25;UBERON:0000947!9.85e-08!21;UBERON:0010191!9.85e-08!21;UBERON:0002385!1.92e-07!63;UBERON:0001015!1.92e-07!63;UBERON:0000383!1.92e-07!63;UBERON:0001009!4.76e-07!113;UBERON:0007023!4.90e-07!115;UBERON:0004535!5.35e-07!110;UBERON:0003056!6.74e-07!61;UBERON:0000922!9.14e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.02e-13;33!UBERON:0004571;1.02e-13;33!UBERON:0002619;5.41e-12;22!UBERON:0001637;8.67e-12;42!UBERON:0003509;8.67e-12;42!UBERON:0004572;8.67e-12;42!UBERON:0001869;3.55e-11;32!UBERON:0001950;3.85e-11;20!UBERON:0002791;9.21e-11;32!UBERON:0001893;1.61e-10;34!UBERON:0003528;1.69e-10;34!UBERON:0002020;1.69e-10;34!UBERON:0000956;1.89e-09;25!UBERON:0000203;1.89e-09;25!UBERON:0002780;2.05e-09;41!UBERON:0001890;2.05e-09;41!UBERON:0000947;2.36e-08;21!UBERON:0010191;2.36e-08;21!UBERON:0007500;3.06e-07;56!UBERON:0001981;3.06e-07;56!UBERON:0004537;3.06e-07;56!UBERON:0000073;3.24e-07;53!UBERON:0002616;3.24e-07;53!UBERON:0003914;7.43e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.10e-23,192;UBERON:0004111,9.66e-20,240;UBERON:0001637,1.36e-16,42;UBERON:0003509,1.36e-16,42;UBERON:0004572,1.36e-16,42;UBERON:0000483,2.61e-16,306;UBERON:0000119,1.30e-15,309;UBERON:0004573,6.91e-15,33;UBERON:0004571,6.91e-15,33;UBERON:0003914,8.40e-15,117;UBERON:0001017,2.09e-12,81;UBERON:0002780,2.24e-12,41;UBERON:0001890,2.24e-12,41;UBERON:0003080,2.24e-12,41;UBERON:0006240,2.24e-12,41;UBERON:0001869,2.33e-12,32;UBERON:0001016,2.36e-12,89;UBERON:0001893,2.81e-12,34;UBERON:0003528,3.40e-12,34;UBERON:0002020,3.40e-12,34;UBERON:0002619,3.50e-12,22;UBERON:0007500,4.01e-12,59;UBERON:0001981,4.01e-12,59;UBERON:0004537,4.01e-12,59;UBERON:0006965,4.01e-12,59;UBERON:0001049,5.20e-12,56;UBERON:0005068,5.20e-12,56;UBERON:0006241,5.20e-12,56;UBERON:0007135,5.20e-12,56;UBERON:0002791,7.15e-12,32;UBERON:0000073,7.82e-12,53;UBERON:0002616,7.82e-12,53;UBERON:0004872,9.92e-12,83;UBERON:0001950,2.90e-11,20;UBERON:0000955,1.02e-10,68;UBERON:0006238,1.02e-10,68;UBERON:0010314,2.10e-10,132;UBERON:0002049,4.02e-10,78;UBERON:0007798,4.02e-10,78;UBERON:0000055,5.10e-10,68;UBERON:0003075,7.99e-10,82;UBERON:0007284,7.99e-10,82;UBERON:0000956,1.31e-09,25;UBERON:0000203,1.31e-09,25;UBERON:0002346,1.70e-09,86;UBERON:0000490,2.43e-09,148;UBERON:0003056,3.44e-09,61;UBERON:0000947,2.89e-08,21;UBERON:0010191,2.89e-08,21;UBERON:0002100,2.13e-07,199;UBERON:0003104,2.42e-07,160;UBERON:0009142,2.42e-07,160;UBERON:0011216,2.97e-07,223;UBERON:0004535,3.42e-07,109;UBERON:0001009,4.46e-07,112;UBERON:0007023,5.13e-07,114 | |||
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| |||
|short_description=p2@SLC1A1 | |||
}} |
Latest revision as of 12:31, 17 September 2015
Short description: | p2@SLC1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC1A1_5end |
Coexpression cluster: | C4823_signet_tubular_Smooth_small_Hepatocyte_Fibroblast_Sertoli |
Association with transcript: | 0bp_to_ENST00000262352, NM_004170, uc003zij.1_5end |
EntrezGene: | SLC1A1 |
HGNC: | 10939 |
UniProt: | P43005 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.09e-12 | 32 |
smooth muscle cell | 2.45e-08 | 43 |
smooth muscle myoblast | 2.45e-08 | 43 |
preadipocyte | 6.34e-08 | 12 |
electrically responsive cell | 2.49e-07 | 61 |
electrically active cell | 2.49e-07 | 61 |
muscle precursor cell | 3.81e-07 | 58 |
myoblast | 3.81e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.81e-07 | 58 |