FFCP PHASE1:Hg19::chr1:31887702..31887740,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=347735 | |EntrezGene=347735 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=23231 | |HGNC=23231 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=125bp_to_uc001bsv.2_5end | |association_with_transcript=125bp_to_uc001bsv.2_5end | ||
|cluster_id=chr1:31887702..31887740,+ | |||
|description=CAGE_peak_11_at_SERINC2_5end | |description=CAGE_peak_11_at_SERINC2_5end | ||
|id=chr1:31887702..31887740,+ | |id=chr1:31887702..31887740,+ | ||
|ontology_enrichment_celltype=CL:0000223!3.96e-21!59;CL:0002076!1.35e-20!43;CL:0000066!2.31e-14!254;CL:0002251!3.32e-12!21;CL:0002327!4.31e-10!4;CL:0002368!1.23e-09!13;CL:0002621!4.43e-07!3 | |ontology_enrichment_celltype=CL:0000223!3.96e-21!59;CL:0002076!1.35e-20!43;CL:0000066!2.31e-14!254;CL:0002251!3.32e-12!21;CL:0002327!4.31e-10!4;CL:0002368!1.23e-09!13;CL:0002621!4.43e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002327;8.19e-12;4!CL:0002252;9.60e-12;1!CL:0002076;1.93e-09;42!CL:0002251;1.23e-08;20!CL:0002159;3.05e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002252,7.76e-12,1;CL:0002327,7.78e-12,4;CL:0002076,1.35e-11,42;CL:0000223,1.19e-10,58;CL:0002251,9.93e-09,20;CL:0000076,1.58e-07,63;CL:0002159,2.46e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.62e-12;1!UBERON:0005754;4.06e-12;1!CL:0000223;6.56e-09;58 | |||
|ontology_enrichment_disease=DOID:1749!2.21e-13!14 | |ontology_enrichment_disease=DOID:1749!2.21e-13!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.97e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.61e-12,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003343;2.74e-24;4!UBERON:0004785;2.74e-24;4!UBERON:0000974;2.05e-16;6!UBERON:0006947;4.59e-15;3!UBERON:0004054;4.59e-15;3!UBERON:0000998;4.06e-12;1!UBERON:0006868;4.06e-12;1!UBERON:0001911;8.19e-12;4!UBERON:0001000;9.60e-12;1!UBERON:0005352;9.60e-12;1!UBERON:0005904;1.55e-11;4!UBERON:0002365;1.69e-08;31!UBERON:0002330;1.69e-08;31!UBERON:0003729;7.20e-08;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.40e-24,4;UBERON:0004785,1.40e-24,4;UBERON:0006947,4.94e-15,3;UBERON:0004054,4.94e-15,3;UBERON:0000998,4.06e-12,1;UBERON:0006868,4.06e-12,1;UBERON:0001911,7.78e-12,4;UBERON:0005333,7.78e-12,4;UBERON:0008425,7.78e-12,4;UBERON:0005311,7.78e-12,4;UBERON:0001000,1.07e-11,1;UBERON:0005352,1.07e-11,1;UBERON:0005904,1.64e-11,4;UBERON:0000974,3.41e-10,10;UBERON:0002365,1.61e-08,31;UBERON:0002330,1.61e-08,31;UBERON:0002530,3.35e-08,59;UBERON:0003729,5.89e-08,13;UBERON:0005157,1.10e-07,47;UBERON:0005153,4.95e-07,37 | |||
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| ||
|short_description=p11@SERINC2 | |short_description=p11@SERINC2 | ||
}} | }} |
Latest revision as of 13:16, 17 September 2015
Short description: | p11@SERINC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SERINC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 125bp_to_uc001bsv.2_5end |
EntrezGene: | SERINC2 |
HGNC: | 23231 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 7.76e-12 | 1 |
mammary gland epithelial cell | 7.78e-12 | 4 |
endo-epithelial cell | 1.35e-11 | 42 |
endodermal cell | 1.19e-10 | 58 |
epithelial cell of alimentary canal | 9.93e-09 | 20 |
squamous epithelial cell | 1.58e-07 | 63 |
general ecto-epithelial cell | 2.46e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.40e-24 | 4 |
respiratory system mucosa | 1.40e-24 | 4 |
male genital duct | 4.94e-15 | 3 |
internal male genitalia | 4.94e-15 | 3 |
seminal vesicle | 4.06e-12 | 1 |
seminal fluid secreting gland | 4.06e-12 | 1 |
mammary gland | 7.78e-12 | 4 |
mammary bud | 7.78e-12 | 4 |
mammary ridge | 7.78e-12 | 4 |
mammary placode | 7.78e-12 | 4 |
vas deferens | 1.07e-11 | 1 |
spermatic cord | 1.07e-11 | 1 |
duct of male reproductive system | 1.64e-11 | 4 |
neck | 3.41e-10 | 10 |
exocrine gland | 1.61e-08 | 31 |
exocrine system | 1.61e-08 | 31 |
gland | 3.35e-08 | 59 |
mouth mucosa | 5.89e-08 | 13 |
epithelial fold | 1.10e-07 | 47 |
epithelial bud | 4.95e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.61e-12 | 14 |