FFCP PHASE1:Hg19::chr2:50149158..50149168,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9378 | |EntrezGene=9378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8008 | |HGNC=8008 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-177bp_to_AF087975_5end | |association_with_transcript=-177bp_to_AF087975_5end | ||
|cluster_id=chr2:50149158..50149168,- | |||
|coexpression_cluster_id=C16 | |coexpression_cluster_id=C16 | ||
|description=CAGE_peak_41_at_NRXN1_5end | |description=CAGE_peak_41_at_NRXN1_5end | ||
|id=chr2:50149158..50149168,- | |id=chr2:50149158..50149168,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.75e-48!34;UBERON:0003528!1.75e-48!34;UBERON:0001049!4.19e-48!57;UBERON:0005068!4.19e-48!57;UBERON:0006241!4.19e-48!57;UBERON:0007135!4.19e-48!57;UBERON:0002616!2.69e-46!59;UBERON:0002780!6.45e-44!41;UBERON:0001890!6.45e-44!41;UBERON:0006240!6.45e-44!41;UBERON:0001893!1.62e-43!34;UBERON:0003080!8.87e-43!42;UBERON:0001869!1.40e-41!32;UBERON:0000955!1.51e-41!69;UBERON:0006238!1.51e-41!69;UBERON:0002791!2.99e-40!33;UBERON:0001017!5.02e-40!82;UBERON:0005743!6.64e-38!86;UBERON:0002619!2.23e-37!22;UBERON:0000073!9.05e-34!94;UBERON:0001016!9.05e-34!94;UBERON:0000956!1.07e-32!25;UBERON:0000203!1.07e-32!25;UBERON:0003075!4.87e-30!86;UBERON:0007284!4.87e-30!86;UBERON:0001950!7.57e-30!20;UBERON:0002346!1.88e-28!90;UBERON:0003056!3.92e-28!61;UBERON:0007023!5.52e-25!115;UBERON:0000033!1.02e-24!123;UBERON:0000153!2.79e-23!129;UBERON:0007811!2.79e-23!129;UBERON:0004121!1.43e-17!169;UBERON:0002308!2.52e-17!9;UBERON:0000125!2.52e-17!9;UBERON:0000924!5.10e-17!173;UBERON:0006601!5.10e-17!173;UBERON:0002771!1.84e-15!3;UBERON:0000349!2.67e-15!5;UBERON:0001871!6.39e-15!7;UBERON:0006331!3.05e-14!3;UBERON:0000200!4.91e-13!6;UBERON:0002420!3.32e-12!9;UBERON:0007245!3.32e-12!9;UBERON:0010009!3.32e-12!9;UBERON:0010011!3.32e-12!9;UBERON:0000454!3.32e-12!9;UBERON:0000025!3.40e-12!194;UBERON:0001954!5.82e-11!2;UBERON:0003022!5.82e-11!2;UBERON:0002421!5.82e-11!2;UBERON:0002600!5.82e-11!2;UBERON:0000369!1.86e-10!4;UBERON:0002435!1.86e-10!4;UBERON:0000204!1.86e-10!4;UBERON:0010082!1.86e-10!4;UBERON:0004111!2.02e-10!241;UBERON:0009663!2.85e-10!7;UBERON:0002148!3.86e-10!2;UBERON:0009662!3.86e-10!2;UBERON:0004733!1.97e-09!12;UBERON:0002028!1.97e-09!12;UBERON:0007277!1.97e-09!12;UBERON:0000477!1.98e-09!286;UBERON:0000064!3.54e-09!219;UBERON:0002298!3.58e-09!8;UBERON:0002021!3.76e-09!5;UBERON:0001872!4.56e-09!5;UBERON:0004732!1.10e-08!13;UBERON:0002680!1.68e-08!9;UBERON:0001895!1.68e-08!9;UBERON:0010092!1.68e-08!9;UBERON:0003076!1.74e-07!15;UBERON:0003057!1.74e-07!15;UBERON:0000988!4.97e-07!3;UBERON:0005383!7.36e-07!3;UBERON:0005382!7.36e-07!3 | |ontology_enrichment_uberon=UBERON:0002020!1.75e-48!34;UBERON:0003528!1.75e-48!34;UBERON:0001049!4.19e-48!57;UBERON:0005068!4.19e-48!57;UBERON:0006241!4.19e-48!57;UBERON:0007135!4.19e-48!57;UBERON:0002616!2.69e-46!59;UBERON:0002780!6.45e-44!41;UBERON:0001890!6.45e-44!41;UBERON:0006240!6.45e-44!41;UBERON:0001893!1.62e-43!34;UBERON:0003080!8.87e-43!42;UBERON:0001869!1.40e-41!32;UBERON:0000955!1.51e-41!69;UBERON:0006238!1.51e-41!69;UBERON:0002791!2.99e-40!33;UBERON:0001017!5.02e-40!82;UBERON:0005743!6.64e-38!86;UBERON:0002619!2.23e-37!22;UBERON:0000073!9.05e-34!94;UBERON:0001016!9.05e-34!94;UBERON:0000956!1.07e-32!25;UBERON:0000203!1.07e-32!25;UBERON:0003075!4.87e-30!86;UBERON:0007284!4.87e-30!86;UBERON:0001950!7.57e-30!20;UBERON:0002346!1.88e-28!90;UBERON:0003056!3.92e-28!61;UBERON:0007023!5.52e-25!115;UBERON:0000033!1.02e-24!123;UBERON:0000153!2.79e-23!129;UBERON:0007811!2.79e-23!129;UBERON:0004121!1.43e-17!169;UBERON:0002308!2.52e-17!9;UBERON:0000125!2.52e-17!9;UBERON:0000924!5.10e-17!173;UBERON:0006601!5.10e-17!173;UBERON:0002771!1.84e-15!3;UBERON:0000349!2.67e-15!5;UBERON:0001871!6.39e-15!7;UBERON:0006331!3.05e-14!3;UBERON:0000200!4.91e-13!6;UBERON:0002420!3.32e-12!9;UBERON:0007245!3.32e-12!9;UBERON:0010009!3.32e-12!9;UBERON:0010011!3.32e-12!9;UBERON:0000454!3.32e-12!9;UBERON:0000025!3.40e-12!194;UBERON:0001954!5.82e-11!2;UBERON:0003022!5.82e-11!2;UBERON:0002421!5.82e-11!2;UBERON:0002600!5.82e-11!2;UBERON:0000369!1.86e-10!4;UBERON:0002435!1.86e-10!4;UBERON:0000204!1.86e-10!4;UBERON:0010082!1.86e-10!4;UBERON:0004111!2.02e-10!241;UBERON:0009663!2.85e-10!7;UBERON:0002148!3.86e-10!2;UBERON:0009662!3.86e-10!2;UBERON:0004733!1.97e-09!12;UBERON:0002028!1.97e-09!12;UBERON:0007277!1.97e-09!12;UBERON:0000477!1.98e-09!286;UBERON:0000064!3.54e-09!219;UBERON:0002298!3.58e-09!8;UBERON:0002021!3.76e-09!5;UBERON:0001872!4.56e-09!5;UBERON:0004732!1.10e-08!13;UBERON:0002680!1.68e-08!9;UBERON:0001895!1.68e-08!9;UBERON:0010092!1.68e-08!9;UBERON:0003076!1.74e-07!15;UBERON:0003057!1.74e-07!15;UBERON:0000988!4.97e-07!3;UBERON:0005383!7.36e-07!3;UBERON:0005382!7.36e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.03e-36;22!UBERON:0000956;4.90e-32;25!UBERON:0000203;4.90e-32;25!UBERON:0001872;3.11e-27;5!UBERON:0001950;1.19e-25;20!UBERON:0003528;3.15e-23;34!UBERON:0002791;3.15e-23;32!UBERON:0002020;3.15e-23;34!UBERON:0001869;5.22e-23;32!UBERON:0001893;2.32e-19;34!UBERON:0002771;5.48e-18;2!UBERON:0001954;9.07e-18;2!UBERON:0003022;9.07e-18;2!UBERON:0002421;9.07e-18;2!UBERON:0002600;9.07e-18;2!UBERON:0002780;4.05e-13;41!UBERON:0001890;4.05e-13;41!UBERON:0002114;2.59e-12;2!UBERON:0000073;8.61e-11;53!UBERON:0002616;8.61e-11;53!UBERON:0002108;6.55e-08;4!UBERON:0002021;6.55e-08;5!UBERON:0000349;6.55e-08;5!UBERON:0001016;1.72e-07;83!UBERON:0000922;2.31e-07;49!UBERON:0000200;7.17e-07;6!UBERON:0000955;7.44e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.03e-36,22;UBERON:0000956,4.90e-32,25;UBERON:0000203,4.90e-32,25;UBERON:0001872,4.63e-27,5;UBERON:0001950,1.35e-25,20;UBERON:0002791,2.20e-25,32;UBERON:0001869,2.20e-25,32;UBERON:0003528,5.71e-24,34;UBERON:0002020,5.71e-24,34;UBERON:0001893,5.71e-24,34;UBERON:0002780,4.46e-20,41;UBERON:0001890,4.46e-20,41;UBERON:0003080,4.46e-20,41;UBERON:0006240,4.46e-20,41;UBERON:0002771,5.48e-18,2;UBERON:0001954,6.48e-18,2;UBERON:0003022,6.48e-18,2;UBERON:0002421,6.48e-18,2;UBERON:0002600,6.48e-18,2;UBERON:0000073,9.69e-16,53;UBERON:0002616,9.69e-16,53;UBERON:0001049,6.12e-15,56;UBERON:0005068,6.12e-15,56;UBERON:0006241,6.12e-15,56;UBERON:0007135,6.12e-15,56;UBERON:0003056,8.92e-14,61;UBERON:0002114,2.59e-12,2;UBERON:0000955,2.95e-12,68;UBERON:0006238,2.95e-12,68;UBERON:0001017,2.09e-10,81;UBERON:0003075,2.09e-10,82;UBERON:0007284,2.09e-10,82;UBERON:0002346,6.00e-10,86;UBERON:0001016,1.98e-09,89;UBERON:0010371,2.61e-08,104;UBERON:0000349,5.73e-08,5;UBERON:0002021,6.13e-08,5;UBERON:0002108,6.55e-08,4;UBERON:0000200,7.17e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.774054819518572,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,0.681017030557878,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39294553647067,0.751145584238999,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,1.51243017733031,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,1.2401207790071,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.774054819518572,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,0.681017030557878,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39294553647067,0.751145584238999,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,1.51243017733031,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,1.2401207790071,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p41@NRXN1 | |short_description=p41@NRXN1 | ||
}} | }} |
Latest revision as of 13:17, 17 September 2015
Short description: | p41@NRXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_41_at_NRXN1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -177bp_to_AF087975_5end |
EntrezGene: | NRXN1 |
HGNC: | 8008 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data