FFCP PHASE1:Hg19::chr13:46700814..46700847,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3936 | |EntrezGene=3936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6528 | |HGNC=6528 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=384bp_to_BC015001_5end | |association_with_transcript=384bp_to_BC015001_5end | ||
|cluster_id=chr13:46700814..46700847,- | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_7_at_LCP1_5end | |description=CAGE_peak_7_at_LCP1_5end | ||
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|ontology_enrichment_celltype=CL:0000037!7.20e-86!172;CL:0000566!7.20e-86!172;CL:0002032!1.57e-83!165;CL:0000837!1.57e-83!165;CL:0000988!3.00e-83!182;CL:0000738!1.25e-79!140;CL:0002087!5.52e-68!119;CL:0002031!9.44e-67!124;CL:0000763!3.16e-58!112;CL:0000049!3.16e-58!112;CL:0000766!1.67e-48!76;CL:0002009!4.56e-46!65;CL:0000557!4.64e-46!71;CL:0002194!4.38e-44!63;CL:0000576!4.38e-44!63;CL:0000040!4.38e-44!63;CL:0000559!4.38e-44!63;CL:0000839!4.24e-43!70;CL:0002057!1.48e-39!42;CL:0000860!1.21e-35!45;CL:0000542!1.24e-20!53;CL:0000051!1.24e-20!53;CL:0000134!4.04e-20!358;CL:0000838!5.10e-20!52;CL:0002320!7.20e-19!365;CL:0000219!2.26e-16!390;CL:0000084!5.71e-13!25;CL:0000827!5.71e-13!25;CL:0000034!6.39e-11!444;CL:0000048!1.08e-10!430;CL:0000723!5.25e-10!436;CL:0000990!8.15e-10!8;CL:0000451!6.89e-09!10;CL:0000791!2.20e-08!18;CL:0000789!2.20e-08!18;CL:0002420!2.20e-08!18;CL:0002419!2.20e-08!18;CL:0000790!2.20e-08!18;CL:0002393!3.37e-08!9;CL:0002397!3.37e-08!9;CL:0000945!2.54e-07!24;CL:0000826!2.54e-07!24;CL:0000840!8.96e-07!5;CL:0001029!8.96e-07!5 | |ontology_enrichment_celltype=CL:0000037!7.20e-86!172;CL:0000566!7.20e-86!172;CL:0002032!1.57e-83!165;CL:0000837!1.57e-83!165;CL:0000988!3.00e-83!182;CL:0000738!1.25e-79!140;CL:0002087!5.52e-68!119;CL:0002031!9.44e-67!124;CL:0000763!3.16e-58!112;CL:0000049!3.16e-58!112;CL:0000766!1.67e-48!76;CL:0002009!4.56e-46!65;CL:0000557!4.64e-46!71;CL:0002194!4.38e-44!63;CL:0000576!4.38e-44!63;CL:0000040!4.38e-44!63;CL:0000559!4.38e-44!63;CL:0000839!4.24e-43!70;CL:0002057!1.48e-39!42;CL:0000860!1.21e-35!45;CL:0000542!1.24e-20!53;CL:0000051!1.24e-20!53;CL:0000134!4.04e-20!358;CL:0000838!5.10e-20!52;CL:0002320!7.20e-19!365;CL:0000219!2.26e-16!390;CL:0000084!5.71e-13!25;CL:0000827!5.71e-13!25;CL:0000034!6.39e-11!444;CL:0000048!1.08e-10!430;CL:0000723!5.25e-10!436;CL:0000990!8.15e-10!8;CL:0000451!6.89e-09!10;CL:0000791!2.20e-08!18;CL:0000789!2.20e-08!18;CL:0002420!2.20e-08!18;CL:0002419!2.20e-08!18;CL:0000790!2.20e-08!18;CL:0002393!3.37e-08!9;CL:0002397!3.37e-08!9;CL:0000945!2.54e-07!24;CL:0000826!2.54e-07!24;CL:0000840!8.96e-07!5;CL:0001029!8.96e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.46e-47;33!CL:0002057;2.46e-47;33!CL:0000473;2.84e-44;39!CL:0000234;2.84e-44;39!CL:0000576;7.12e-34;48!CL:0000766;4.65e-27;69!CL:0000738;5.53e-19;136!CL:0002087;5.17e-17;104!CL:0000763;3.30e-16;100!CL:0000990;6.61e-15;8!CL:0000988;2.04e-13;177!CL:0000451;8.77e-12;10!CL:0000840;5.31e-10;5!CL:0000453;1.18e-09;5!CL:0000219;2.96e-08;193!CL:0000235;1.82e-07;6!CL:0000775;6.27e-07;3 | |ontology_enrichment_celltype_v019=CL:0000860;2.46e-47;33!CL:0002057;2.46e-47;33!CL:0000473;2.84e-44;39!CL:0000234;2.84e-44;39!CL:0000576;7.12e-34;48!CL:0000766;4.65e-27;69!CL:0000738;5.53e-19;136!CL:0002087;5.17e-17;104!CL:0000763;3.30e-16;100!CL:0000990;6.61e-15;8!CL:0000988;2.04e-13;177!CL:0000451;8.77e-12;10!CL:0000840;5.31e-10;5!CL:0000453;1.18e-09;5!CL:0000219;2.96e-08;193!CL:0000235;1.82e-07;6!CL:0000775;6.27e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.48e-80,136;CL:0000988,1.36e-77,177;CL:0000037,1.84e-77,168;CL:0002032,9.08e-75,161;CL:0000837,9.08e-75,161;CL:0002087,6.45e-72,115;CL:0000473,3.22e-67,48;CL:0000234,3.22e-67,48;CL:0002031,9.60e-67,120;CL:0002009,1.87e-66,61;CL:0002194,2.88e-63,59;CL:0000576,2.88e-63,59;CL:0000040,2.88e-63,59;CL:0000559,2.88e-63,59;CL:0000763,6.01e-62,108;CL:0000049,6.01e-62,108;CL:0000766,2.13e-61,72;CL:0000557,3.50e-61,67;CL:0000860,5.12e-61,42;CL:0002057,5.12e-61,42;CL:0000839,5.89e-57,66;CL:0000134,3.11e-22,354;CL:0002320,2.78e-21,361;CL:0000219,1.37e-18,386;CL:0000990,5.67e-15,8;CL:0000048,6.41e-14,427;CL:0000723,2.27e-13,433;CL:0000034,3.42e-13,441;CL:0000542,4.68e-12,53;CL:0000051,4.68e-12,53;CL:0000451,7.76e-12,10;CL:0000838,2.42e-11,52;CL:0002393,3.30e-10,9;CL:0002397,3.30e-10,9;CL:0000840,4.81e-10,5;CL:0001029,4.81e-10,5;CL:0000453,1.18e-09,5;CL:0000235,1.63e-07,6;CL:0000775,6.31e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;9.80e-44;42!CL:0000049;9.32e-19;108 | |ontology_enrichment_development_v019=CL:0002057;9.80e-44;42!CL:0000049;9.32e-19;108 | ||
|ontology_enrichment_disease=DOID:2531!1.04e-19!51;DOID:0060083!1.04e-19!51;DOID:1240!2.03e-14!39;DOID:8692!9.16e-10!31;DOID:0060058!4.33e-08!10 | |ontology_enrichment_disease=DOID:2531!1.04e-19!51;DOID:0060083!1.04e-19!51;DOID:1240!2.03e-14!39;DOID:8692!9.16e-10!31;DOID:0060058!4.33e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.08e-08;10!DOID:2531;3.49e-07;51!DOID:0060083;3.49e-07;51 | |ontology_enrichment_disease_v019=DOID:0060058;3.08e-08;10!DOID:2531;3.49e-07;51!DOID:0060083;3.49e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,1.44e-11,51;DOID:0060083,1.44e-11,51;DOID:0060058,1.91e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.89e-53!102;UBERON:0003061!2.89e-53!102;UBERON:0002193!4.83e-48!112;UBERON:0002371!1.38e-39!80;UBERON:0001474!5.25e-35!86;UBERON:0002405!6.51e-29!115;UBERON:0004765!4.57e-26!101;UBERON:0001434!4.57e-26!101;UBERON:0002384!1.25e-17!375;UBERON:0003081!1.36e-13!216;UBERON:0000178!4.17e-10!15;UBERON:0000179!4.17e-10!15;UBERON:0000463!4.17e-10!15;UBERON:0002204!1.58e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!2.89e-53!102;UBERON:0003061!2.89e-53!102;UBERON:0002193!4.83e-48!112;UBERON:0002371!1.38e-39!80;UBERON:0001474!5.25e-35!86;UBERON:0002405!6.51e-29!115;UBERON:0004765!4.57e-26!101;UBERON:0001434!4.57e-26!101;UBERON:0002384!1.25e-17!375;UBERON:0003081!1.36e-13!216;UBERON:0000178!4.17e-10!15;UBERON:0000179!4.17e-10!15;UBERON:0000463!4.17e-10!15;UBERON:0002204!1.58e-08!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.25e-12;15!UBERON:0000179;2.25e-12;15!UBERON:0000463;2.25e-12;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.25e-12;15!UBERON:0000179;2.25e-12;15!UBERON:0000463;2.25e-12;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.72e-64,98;UBERON:0003061,2.72e-64,98;UBERON:0002193,3.44e-58,108;UBERON:0002371,3.87e-54,76;UBERON:0001474,6.87e-49,82;UBERON:0002405,3.08e-46,93;UBERON:0004765,5.54e-43,90;UBERON:0001434,6.11e-37,100;UBERON:0003081,3.89e-21,203;UBERON:0002384,5.50e-20,371;UBERON:0002204,1.72e-15,167;UBERON:0000178,3.12e-12,15;UBERON:0000179,3.12e-12,15;UBERON:0000463,3.12e-12,15;UBERON:0000926,1.03e-07,315;UBERON:0004120,1.03e-07,315;UBERON:0006603,1.03e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05653622991805,1.47781061009902,1.73163718890094,0,0.767658796194425,0.619264493264304,0,0,0,1.08454080812422,1.9903692548239,0,0.553995408531877,2.00544447470142,1.08505435357926,0.447830948479849,0.647787332037959,0.257575567634187,2.90796477559129,3.40088349319928,1.69808842831471,5.34586784883075,6.98985409637104,7.12324653058738,5.75384784644301,4.86705342405291,5.67557351732605,4.82643953031266,5.16387746867061,4.06279459783025,6.77672422353377,5.18521685109907,3.82029923556644,7.03992952453076,6.73950956859797,6.39337125799041,2.30895910130701,3.78980949481101,3.83602275479425,13.3496249769149,7.37600792098482,9.34233373493363,10.5524439407832,10.429658368404,3.47502151528187,10.2917915447673,8.83866326370155,12.6584954976354,7.6051903072299,3.61427309940574,2.72556239160889,2.3589012540764,4.6554836780867,3.69668849403284,1.42506371870624,3.38158351238453,2.37463399894024,0,0.546138611262131,1.77901850772711,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0.790152254325231,0.590129310341499,1.96505381374582,1.43921049299656,1.17030546773475,0.32592226663359,0.946895611469467,0,1.89397776704795,1.47302953737419,1.10766947291811,2.16643091012012,3.20228299314188,2.47112760363769,3.94650971048823,4.69795030235942,2.02862160014537,1.18629250529648,0.267540828089713,0,1.35971211237079,0.383220493601921,1.03088233644789,2.27717722817553,0,0.651083453856419,0,0.451725357233318,0.511946444617674,1.24930726552346,0.473554504088034,1.64225599384209,0.201606743224732,2.13952156626806,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,1.9472843619281,4.87563264437948,6.38198210490553,2.14641561874808,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.464775771478074,0.207322110030741,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,5.6161023633417,1.63494278517601,0,0,0,0.179117045405697,0.290633938513962,0.383382679165211,0,1.14462964217194,0.829312462163088,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29742683847143,5.52482800575339,50.6001454759276,0,0,0,0.144781306667579,0,0,2.35378802386407,0.197030760201927,0.646882724578552,1.28343036279748,0,0,0,0,0,40.4463792931478,95.731666945288,16.9910360508775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.94142780736755,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,0,2.27858874869665,0.238231775457789,2.46817363851717,3.24236655596359,0.540031437238115,4.75875105776562,0,0,0.245040215981032,1.30062222588003,0.28853842595289,0.640276590135727,2.55082036366116,0.997896857164083,0.5745161103971,2.11673582723883,0,3.08876895924805,1.82587743226554,1.25343916618419,2.50634477090067,0.846458889008016,1.1241165257259,1.81619736471943,0.425846237690326,7.55711758462682,0.614481528616916,0.671028323677248,1.00109485027145,0.976940477010201,0.278406173895242,0,1.08182271390393,0.66614393599564,0,0,0,0,0.222886768554957,0,0.23874448473769,0,0,0,0,0,1.31843099381408,0,0,0.552567831062295,0.251932747854276,0,1.96935688737711,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,1.25660702173681,0,0,0,0,9.19739683761629,0.627921025580099,1.16348177330109,0.225595660617181,0,0,0,0.158936578980379,0,0,0.282706142867882,0,0,0,0,2.07564790076435,2.22415090103705,2.71497068714184,0.067401132980677,0,0,0.729819156862664,0,0,0.394584402849391,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0,0,0.411125773940253,0,0,0.195551382734803,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62887354279315,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,2.79421995817089,0,0,0.160753148465019,0,0,6.52424285499351,4.6428117273477,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0.828478110694391,1.48849806543585,0.790446527591777,2.55764456599881,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0.181848659202559,0,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6916185303633,8.90194430099533,5.72478879895455,6.55219697692825,0,0,2.99981093782395,1.17360902663555,2.75543967457305,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|short_description=p7@LCP1 | |short_description=p7@LCP1 | ||
}} | }} |
Latest revision as of 13:27, 17 September 2015
Short description: | p7@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LCP1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 384bp_to_BC015001_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.72e-64 | 98 |
blood island | 2.72e-64 | 98 |
hemolymphoid system | 3.44e-58 | 108 |
bone marrow | 3.87e-54 | 76 |
bone element | 6.87e-49 | 82 |
immune system | 3.08e-46 | 93 |
skeletal element | 5.54e-43 | 90 |
skeletal system | 6.11e-37 | 100 |
lateral plate mesoderm | 3.89e-21 | 203 |
connective tissue | 5.50e-20 | 371 |
musculoskeletal system | 1.72e-15 | 167 |
blood | 3.12e-12 | 15 |
haemolymphatic fluid | 3.12e-12 | 15 |
organism substance | 3.12e-12 | 15 |
mesoderm | 1.03e-07 | 315 |
mesoderm-derived structure | 1.03e-07 | 315 |
presumptive mesoderm | 1.03e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.44e-11 | 51 |
immune system cancer | 1.44e-11 | 51 |
lymphoma | 1.91e-08 | 10 |