FFCP PHASE1:Hg19::chr13:46785927..46785972,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3936 | |EntrezGene=3936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6528 | |HGNC=6528 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TBN5 | |UniProt=Q5TBN5 | ||
|association_with_transcript=33bp_to_ENST00000442275_5end | |association_with_transcript=33bp_to_ENST00000442275_5end | ||
|cluster_id=chr13:46785927..46785972,- | |||
|description=CAGE_peak_5_at_LCP1_5end | |description=CAGE_peak_5_at_LCP1_5end | ||
|id=chr13:46785927..46785972,- | |id=chr13:46785927..46785972,- | ||
|ontology_enrichment_celltype=CL:0000037!1.65e-13!172;CL:0000566!1.65e-13!172;CL:0000084!2.14e-12!25;CL:0000827!2.14e-12!25;CL:0002032!1.76e-11!165;CL:0000837!1.76e-11!165;CL:0000738!9.70e-11!140;CL:0000988!1.02e-10!182;CL:0000791!1.07e-10!18;CL:0000789!1.07e-10!18;CL:0002420!1.07e-10!18;CL:0002419!1.07e-10!18;CL:0000790!1.07e-10!18;CL:0002031!1.14e-08!124;CL:0000542!1.97e-07!53;CL:0000051!1.97e-07!53;CL:0002087!3.38e-07!119;CL:0000838!3.90e-07!52 | |ontology_enrichment_celltype=CL:0000037!1.65e-13!172;CL:0000566!1.65e-13!172;CL:0000084!2.14e-12!25;CL:0000827!2.14e-12!25;CL:0002032!1.76e-11!165;CL:0000837!1.76e-11!165;CL:0000738!9.70e-11!140;CL:0000988!1.02e-10!182;CL:0000791!1.07e-10!18;CL:0000789!1.07e-10!18;CL:0002420!1.07e-10!18;CL:0002419!1.07e-10!18;CL:0000790!1.07e-10!18;CL:0002031!1.14e-08!124;CL:0000542!1.97e-07!53;CL:0000051!1.97e-07!53;CL:0002087!3.38e-07!119;CL:0000838!3.90e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.82e-18;18!CL:0000789;3.82e-18;18!CL:0002419;3.82e-18;18!CL:0000084;1.90e-15;25!CL:0000624;1.85e-09;6!CL:0000625;2.88e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.28e-18,18;CL:0000789,2.28e-18,18;CL:0002420,2.28e-18,18;CL:0002419,2.28e-18,18;CL:0000790,2.28e-18,18;CL:0000084,1.30e-15,25;CL:0000827,1.30e-15,25;CL:0000037,1.68e-12,168;CL:0000988,4.62e-11,177;CL:0000542,1.09e-10,53;CL:0000051,1.09e-10,53;CL:0000738,1.11e-10,136;CL:0002032,2.12e-10,161;CL:0000837,2.12e-10,161;CL:0000838,3.76e-10,52;CL:0000625,1.35e-09,11;CL:0000624,2.71e-09,6;CL:0002031,5.37e-09,120 | |||
|ontology_enrichment_development_v019=CL:0000790;3.82e-18;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.91e-17!115;UBERON:0001049!1.71e-08!57;UBERON:0005068!1.71e-08!57;UBERON:0006241!1.71e-08!57;UBERON:0007135!1.71e-08!57;UBERON:0002346!1.15e-07!90;UBERON:0000073!5.57e-07!94;UBERON:0001016!5.57e-07!94;UBERON:0002616!7.48e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;7.14e-08;6!UBERON:0002346;8.54e-07;4!UBERON:0000923;8.54e-07;4!UBERON:0010316;8.54e-07;4!UBERON:0005291;8.54e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.57e-10,114;UBERON:0002298,2.66e-08,6;UBERON:0003408,1.05e-07,10;UBERON:0002370,3.20e-07,4;UBERON:0005058,3.20e-07,4;UBERON:0009113,3.20e-07,4;UBERON:0003295,3.20e-07,4;UBERON:0005562,3.20e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,2.53299878168311,0,0,0,0,0.655324116390517,0,0,0.331397375727916,0,0,0,0.487932798790507,0.61560529038394,0.204000691244253,0,0,0,0.251085279189606,0,0.164201178899891,0,2.36018566109342,2.68680578668049,1.08371286321253,0,0,0,0.154934401160603,0.142169232487422,0.293600439334847,2.76997704265939,1.60435557976113,2.60413044859022,0.447830948479849,0.971680998056939,1.80302897343931,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0,0,1.0246428261164,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0.989553900560148,0.199463657621632,0.852449501065388,0,0,0,0,0,0.217188844705117,1.21079900526674,0,0.316462387440884,1.05627643155971,0.212604299965044,1.25795187305026,0.44931452458598,1.20141514273205,0.32145117339416,0.285012743741249,0.19891667719909,0.730656615058536,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,0,0.382273228125229,0,1.12101712596307,0.263384084775077,4.52432471261816,5.10913991573914,7.60725546298184,0.668745981562712,2.28145586643513,0.946895611469467,5.84480185223734,3.00808233589969,2.06224135232386,0.886135578334485,3.5204502289452,1.79327847615945,2.47112760363769,0.986627427622057,3.59255023121603,1.15921234294021,7.71090128442714,5.61835738988397,6.27213142829861,2.03956816855619,6.13152789763074,4.81078423675682,5.06039384039006,1.59282707162048,1.95325036156926,0.950452044448374,2.71035214339991,3.4556385011693,0,1.65744076430812,2.46338399076314,6.45141578319144,7.75576567772171,8.25499102131954,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0,0.851363990735132,0,0.741568885568859,0.97364218096405,0,0.26591592103773,1.19245312152671,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0,0,0.71153252537342,0,0,0,0,0,0,0.17859945656816,0,0.225222960966644,1.53316637465883,0,0,0,0,0,0,0,0.662045904066094,0.573673241497627,0.354668382198357,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0.413303124703062,0,0,0,0.718618141816238,0,0,0.277064115484183,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0,0.600182192168805,0,0,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.10075209822764,0.508681776931463,0,0,0,0.121973706129595,0,0.232387885739037,0.518305275076852,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,3.5317047953172,0.122988438543114,0.514703430895577,0,0,0,0.185176890317059,0,0,0,0.231860809950154,0,0,0,0,0,0,0.984868024349589,0.468008530278475,0.891786973732369,0,0,0,0.0895585227028483,0,0,0.492663237895943,1.76096868026452,2.07328115540772,2.45003920808834,1.64115163454294,0.444485260045183,0.763976851116555,1.17217447210047,0,0.205654985406647,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,7.50970464756633,5.31983052545203,5.39068937148793,4.10697716095195,0,0,0.773288812777695,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0.902838299183157,0,0,0,0,0.260650843404249,0,0,1.6541442089831,3.8828556147351,0.853820462427555,0.303127571446259,0,0.907170879989041,0,0,0,0,0,0.482561763430822,0,1.07946785661859,0.355123450626254,0.821271560138091,0,0.232420756919918,0,0,0,0.114814448164607,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,3.06963827304308,2.0914836081992,0.256450125116389,1.64007322849853,0.325378394664303,0.618246069886334,0.457847324091717,0.742585499285292,0,0,0,0.676695028044854,0.154048617114644,0.15350367472613,0,0.107420244868274,0.290033387828457,0.340906509664404,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0.744316738719335,1.2655176988749,0,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0,1.13008116620243,0,0,0,0,0,0,0,0.563391205064483,0.286822704408103,0.0982490410131212,0,0.709522128141196,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,1.01489521846434,0.764637207142375,0,1.19115887728894,2.46817363851717,1.29694662238543,2.70015718619057,0.79312517629427,0,0,0.245040215981032,1.11481905075431,0.577076851905779,4.19736875755643,0.956557636372934,2.19537308576098,0.766021480529467,0.423347165447766,0.649243880549111,1.96558024679421,0.228234679033192,0.313359791546046,0,2.53937666702405,1.1241165257259,1.00899853595524,0,1.37402137902306,2.15068535015921,0.223676107892416,0.500547425135725,2.54004524022652,0.278406173895242,0,1.6227340708559,0,0,0,0.146508179271894,0,0.557216921387392,0,0,0.296964680832639,1.22864280839693,0,0.844016498463076,0.667852230137435,0.329607748453519,0,0.19924798825107,0.828851746593443,1.0077309914171,0,0,0,0,0,2.55786185113436,0.197286811273867,0,0,0,0.834912883456661,0,0,0.262379999988587,0.724999575434793,0.1137934482855,0,0.236387681767936,1.72371686620732,0.583209226766509,0.520874984799877,0.885741385813839,0.361789315876224,0,0.221158519862449,0,0.219385397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| ||
|short_description=p5@LCP1 | |short_description=p5@LCP1 | ||
}} | }} |
Latest revision as of 13:46, 17 September 2015
Short description: | p5@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LCP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_ENST00000442275_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | Q5TBN5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.28e-18 | 18 |
alpha-beta T cell | 2.28e-18 | 18 |
immature T cell | 2.28e-18 | 18 |
mature T cell | 2.28e-18 | 18 |
immature alpha-beta T cell | 2.28e-18 | 18 |
T cell | 1.30e-15 | 25 |
pro-T cell | 1.30e-15 | 25 |
hematopoietic stem cell | 1.68e-12 | 168 |
hematopoietic cell | 4.62e-11 | 177 |
lymphocyte | 1.09e-10 | 53 |
common lymphoid progenitor | 1.09e-10 | 53 |
leukocyte | 1.11e-10 | 136 |
hematopoietic oligopotent progenitor cell | 2.12e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.12e-10 | 161 |
lymphoid lineage restricted progenitor cell | 3.76e-10 | 52 |
CD8-positive, alpha-beta T cell | 1.35e-09 | 11 |
CD4-positive, alpha-beta T cell | 2.71e-09 | 6 |
hematopoietic lineage restricted progenitor cell | 5.37e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.57e-10 | 114 |
brainstem | 2.66e-08 | 6 |
gland of gut | 1.05e-07 | 10 |
thymus | 3.20e-07 | 4 |
hemolymphoid system gland | 3.20e-07 | 4 |
thymic region | 3.20e-07 | 4 |
pharyngeal gland | 3.20e-07 | 4 |
thymus primordium | 3.20e-07 | 4 |