FFCP PHASE1:Hg19::chr15:41136369..41136420,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6692 | |EntrezGene=6692 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11246 | |HGNC=11246 | ||
|TSSclassifier=strong | |||
|UniProt=F5H877,O43278 | |UniProt=F5H877,O43278 | ||
|association_with_transcript=123bp_to_ENST00000536281,NM_003710,NM_181642,uc001zna.2,uc001znb.2_5end | |association_with_transcript=123bp_to_ENST00000536281,NM_003710,NM_181642,uc001zna.2,uc001znb.2_5end | ||
|cluster_id=chr15:41136369..41136420,+ | |||
|coexpression_cluster_id=C1334 | |coexpression_cluster_id=C1334 | ||
|description=CAGE_peak_3_at_SPINT1_5end | |description=CAGE_peak_3_at_SPINT1_5end | ||
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|ontology_enrichment_celltype=CL:0000066!3.79e-28!254;CL:0002076!2.10e-17!43;CL:0000223!1.56e-14!59;CL:0002368!1.19e-09!13;CL:0002159!4.58e-08!13;CL:0002251!6.97e-08!21;CL:0000039!1.73e-07!7;CL:0000586!1.73e-07!7;CL:0002202!8.50e-07!9;CL:0002632!8.50e-07!9 | |ontology_enrichment_celltype=CL:0000066!3.79e-28!254;CL:0002076!2.10e-17!43;CL:0000223!1.56e-14!59;CL:0002368!1.19e-09!13;CL:0002159!4.58e-08!13;CL:0002251!6.97e-08!21;CL:0000039!1.73e-07!7;CL:0000586!1.73e-07!7;CL:0002202!8.50e-07!9;CL:0002632!8.50e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.32e-17;42!CL:0002368;2.40e-12;13!CL:0000039;2.15e-09;7!CL:0000586;2.15e-09;7!CL:0002251;4.81e-09;20!CL:0002202;1.23e-08;9!CL:0002632;1.23e-08;9!CL:0002159;4.27e-08;14!CL:1000507;1.73e-07;10!CL:1000494;1.73e-07;10!CL:0002322;7.15e-07;5 | |ontology_enrichment_celltype_v019=CL:0002076;5.32e-17;42!CL:0002368;2.40e-12;13!CL:0000039;2.15e-09;7!CL:0000586;2.15e-09;7!CL:0002251;4.81e-09;20!CL:0002202;1.23e-08;9!CL:0002632;1.23e-08;9!CL:0002159;4.27e-08;14!CL:1000507;1.73e-07;10!CL:1000494;1.73e-07;10!CL:0002322;7.15e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.44e-33,253;CL:0002076,4.41e-22,42;CL:0000223,1.80e-16,58;CL:0002368,2.24e-12,13;CL:0000039,2.46e-09,7;CL:0000586,2.46e-09,7;CL:0002251,5.15e-09,20;CL:0002202,1.23e-08,9;CL:0002632,1.23e-08,9;CL:0002159,4.71e-08,14;CL:1000507,1.85e-07,10;CL:1000494,1.85e-07,10;CL:0002322,7.60e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;5.26e-09;58 | |ontology_enrichment_development_v019=CL:0000223;5.26e-09;58 | ||
|ontology_enrichment_disease=DOID:305!6.70e-15!106;DOID:0050687!1.16e-09!143;DOID:1749!2.74e-09!14 | |ontology_enrichment_disease=DOID:305!6.70e-15!106;DOID:0050687!1.16e-09!143;DOID:1749!2.74e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.00e-11;14!DOID:299;6.18e-08;25!DOID:305;5.37e-07;106 | |ontology_enrichment_disease_v019=DOID:1749;1.00e-11;14!DOID:299;6.18e-08;25!DOID:305;5.37e-07;106 | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.11e-17,106;DOID:1749,1.09e-11,14;DOID:0050687,1.26e-11,143;DOID:299,6.61e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.01e-18!169;UBERON:0000925!3.01e-18!169;UBERON:0006595!3.01e-18!169;UBERON:0001007!6.99e-13!155;UBERON:0001555!6.99e-13!155;UBERON:0007026!6.99e-13!155;UBERON:0000464!1.85e-12!104;UBERON:0004921!5.72e-12!129;UBERON:0004185!5.72e-12!129;UBERON:0000466!4.12e-11!126;UBERON:0000077!5.22e-11!130;UBERON:0001004!5.05e-10!72;UBERON:0005911!1.89e-09!82;UBERON:0001008!5.00e-09!45;UBERON:0006554!1.27e-08!44;UBERON:0005153!1.44e-08!37;UBERON:0000161!7.50e-08!35;UBERON:0005631!1.07e-07!14;UBERON:0000158!1.07e-07!14;UBERON:0000064!1.09e-07!219;UBERON:0005156!1.72e-07!59;UBERON:0000990!1.72e-07!59;UBERON:0005178!3.42e-07!34;UBERON:0002224!3.42e-07!34;UBERON:0000065!6.17e-07!53;UBERON:0005177!8.41e-07!107;UBERON:0005181!8.71e-07!35;UBERON:0002553!9.89e-07!70 | |ontology_enrichment_uberon=UBERON:0004119!3.01e-18!169;UBERON:0000925!3.01e-18!169;UBERON:0006595!3.01e-18!169;UBERON:0001007!6.99e-13!155;UBERON:0001555!6.99e-13!155;UBERON:0007026!6.99e-13!155;UBERON:0000464!1.85e-12!104;UBERON:0004921!5.72e-12!129;UBERON:0004185!5.72e-12!129;UBERON:0000466!4.12e-11!126;UBERON:0000077!5.22e-11!130;UBERON:0001004!5.05e-10!72;UBERON:0005911!1.89e-09!82;UBERON:0001008!5.00e-09!45;UBERON:0006554!1.27e-08!44;UBERON:0005153!1.44e-08!37;UBERON:0000161!7.50e-08!35;UBERON:0005631!1.07e-07!14;UBERON:0000158!1.07e-07!14;UBERON:0000064!1.09e-07!219;UBERON:0005156!1.72e-07!59;UBERON:0000990!1.72e-07!59;UBERON:0005178!3.42e-07!34;UBERON:0002224!3.42e-07!34;UBERON:0000065!6.17e-07!53;UBERON:0005177!8.41e-07!107;UBERON:0005181!8.71e-07!35;UBERON:0002553!9.89e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.50e-09;33!UBERON:0005178;3.60e-09;34!UBERON:0002224;3.60e-09;34!UBERON:0005911;3.66e-09;36!UBERON:0005181;1.62e-08;35!UBERON:0004807;1.87e-08;22!UBERON:0006554;5.12e-08;30!UBERON:0001008;5.12e-08;30!UBERON:0002048;5.76e-08;22!UBERON:0000117;5.76e-08;22!UBERON:0000171;5.76e-08;22!UBERON:0000170;5.76e-08;22!UBERON:0004211;1.73e-07;10!UBERON:0009773;1.73e-07;10!UBERON:0001231;1.73e-07;10!UBERON:0004810;1.73e-07;10!UBERON:0005409;3.42e-07;22!UBERON:0000365;3.42e-07;5!UBERON:0001555;6.41e-07;54 | |ontology_enrichment_uberon_v019=UBERON:0004921;1.50e-09;33!UBERON:0005178;3.60e-09;34!UBERON:0002224;3.60e-09;34!UBERON:0005911;3.66e-09;36!UBERON:0005181;1.62e-08;35!UBERON:0004807;1.87e-08;22!UBERON:0006554;5.12e-08;30!UBERON:0001008;5.12e-08;30!UBERON:0002048;5.76e-08;22!UBERON:0000117;5.76e-08;22!UBERON:0000171;5.76e-08;22!UBERON:0000170;5.76e-08;22!UBERON:0004211;1.73e-07;10!UBERON:0009773;1.73e-07;10!UBERON:0001231;1.73e-07;10!UBERON:0004810;1.73e-07;10!UBERON:0005409;3.42e-07;22!UBERON:0000365;3.42e-07;5!UBERON:0001555;6.41e-07;54 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.56e-24,160;UBERON:0000925,1.56e-24,160;UBERON:0006595,1.56e-24,160;UBERON:0001007,2.42e-17,145;UBERON:0001555,2.42e-17,145;UBERON:0007026,2.42e-17,145;UBERON:0004921,2.26e-15,118;UBERON:0001008,2.78e-14,48;UBERON:0006554,1.02e-13,47;UBERON:0001004,1.30e-12,74;UBERON:0005153,3.26e-12,37;UBERON:0005911,3.67e-12,82;UBERON:0005178,2.49e-10,34;UBERON:0002224,2.49e-10,34;UBERON:0005157,3.54e-10,47;UBERON:0005631,5.76e-10,14;UBERON:0000158,5.76e-10,14;UBERON:0005181,7.54e-10,35;UBERON:0000065,1.19e-09,54;UBERON:0005177,2.21e-09,101;UBERON:0005156,6.10e-09,59;UBERON:0000990,6.10e-09,59;UBERON:0000161,6.99e-09,36;UBERON:0000915,2.38e-08,52;UBERON:0002048,5.03e-08,22;UBERON:0000117,5.03e-08,22;UBERON:0000171,5.03e-08,22;UBERON:0000170,5.03e-08,22;UBERON:0005597,5.03e-08,22;UBERON:0000118,5.03e-08,22;UBERON:0001041,7.80e-08,87;UBERON:0003124,9.05e-08,7;UBERON:0004175,1.79e-07,25;UBERON:0004810,1.85e-07,10;UBERON:0004807,2.33e-07,28;UBERON:0009569,2.89e-07,112;UBERON:0000365,3.22e-07,5;UBERON:0003133,3.42e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,23.8361918406464,120.021800891258,12.4511582114198,13.979649846108,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.152826811495903,0.246301768349837,0.157421562627358,0,0,0,12.871897142705,17.4699432891385,24.7735186811748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0.382273228125229,1.32171328579026,0,0,0,0.393010762749165,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.263504357079378,2.94702919869853,29.1436230634034,15.2021621541616,0,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0076680335588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5956511897978,10.3643525824517,6.30970109855808,23.5409252830119,17.6264591867575,16.6157338303411,13.0612929319367,16.1485344560402,5.10968302706162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3574623262341,1.71567810298526,13.2797845344437,20.2323155863715,10.2539551859863,9.90696363196267,0,0,1.44331342025273,0.231860809950154,0.352226082707465,0,0,0,16.5942923571448,10.3018339451385,0,0,0,6.56136837907439,11.7587489739202,14.4610599187234,4.74660170325096,8.4283842169049,11.8848630541215,0,0,0,0.144119953416961,0.12624243342638,0.126995788584338,0,0,5.13217338068116,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,13.3376131436354,16.6435439510497,11.1884408531982,0,0,0,0,0,0,2.96836132889982,0,0.177561725313127,0,0,0,15.2282906485444,20.0506470303285,34.8066138177688,0,0,0,23.9135794840928,13.2466379819593,5.49044838423799,4.38417673959782,5.80533958910816,0,0,0,0,0.270946437543853,1.00337954770971,18.6059679322878,36.5673443928639,3.1342465661105,0,0,0,0.328014645699706,0.325378394664303,10.7162652113631,0,0,9.18824860793876,13.6512651667669,0,0,0,0,0,0,0,0,0,15.8673518746539,14.9908252544783,5.6149593497617,27.7172319544207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0.379473173765715,0,12.4126525415911,22.119975092681,22.8671068208777,10.5441056869993,25.3998169876026,23.5860065934676,20.3977870626871,20.2156592182124,0,0,0,0,0,0,0.540031437238115,0,0,0,8.82144777531714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,0,0,0,0,5.23993513143015,0.146508179271894,0,0,0,18.3833253248021,8.61197574414652,12.9007494881677,0,0.140669416410513,0,0,8.65614173324773,0.796991953004279,0.828851746593443,16.1236958626737,0.409074730008619,0.246169610922139,0,9.52604522161664,22.5566680091268,0,2.07151151837561,0,0,0.969332746095218,0,0,8.33368835472746,18.0167599992163,4.34999745260876,9.10347586283997,12.4584288643455,8.98273190718158,0,0,0,0,0,1.52581736317083,0.221158519862449,0.295547618953547,0,0,12.6875607293529,2.23155749661011,0,42.8848862161792,16.0666183493492,33.8979800396665,9.57003479195758,12.640467889457,6.92945208824225,0,0,0,0,0,0,0,0,0,31.993630399193,16.679662429205,0,2.98578579323551,7.43043541828049,6.72133159426988,0,0,0,0,0,0,0,10.7615540412649,0,10.6537788769335,15.7287930863263,0.61214552326098,0.063186579628488,0,0.103688191397247,0,0,0,0,9.39211501898316,0,28.1166776102912,14.3068900224991,9.48945351726388,9.43524008506963,0,0,0,0,6.69224213770094,0,4.06765333404958,0,0,0,14.4708023223754,14.4285876452761,4.0556069000477,0,13.1122279610236,0,0,0,0.124252535565433,12.4917838346902,0,0,0,0,0,0,0,0,0,0,0,0,10.5829870264465,0,0,0.0671834724867263,0,11.6495949527454,0.157566364614447,0.0824158583811665,0.13480708770837,0,0,0,0,16.879080588827,15.6794957720847,17.4484941972258,0.2249738915515,0.77380195455795,0.182248669974074,11.404779378375,5.51639951094387,10.0188263337846,0,0,13.8178942070001,0,0,0,0,0,0,0,0.082092520749339,0,0,0.58620893471233,0,0.387848869084652,0.13223260174269,0,7.75296524548339,3.31040978959853,3.93010762749165,3.31391244277756,0,0,0.121792598380896,10.2134601243229,0,0,0,0,40.3629027363102,0,0,0,0,0.110929051536852,0.372578417648301,0,0,0,0.285465333544967,0,0.936669811613763,3.04334160082733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0.584580926518165,0.265729680626726,0.327130788511688,0,0,11.6221667847245,0,0.106691729694141,0,0,0,25.1783113895,14.9298542407913,0,0,0,0,0,0,0,0.558644917973244,0,0,4.80342448971282,0,0,0,0,0,0,0,0.0691572524642179,0,0,9.22588553909641,3.18518253038899,4.4022863645203,6.46943730441894,0,0,0,1.12815492523886,0,14.0672522021957,35.6193104494735,0,9.61064560410794,0,0,0,0,0,10.4168975702865,0.992422356778588,0,17.375690158985,0,0,10.9253808762594,5.69155478378244,21.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| ||
|short_description=p3@SPINT1 | |short_description=p3@SPINT1 | ||
}} | }} |
Latest revision as of 13:58, 17 September 2015
Short description: | p3@SPINT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPINT1_5end |
Coexpression cluster: | C1334_Alveolar_gall_Renal_nasal_Prostate_signet_colon |
Association with transcript: | 123bp_to_ENST00000536281, NM_003710, NM_181642, uc001zna.2, uc001znb.2_5end |
EntrezGene: | SPINT1 |
HGNC: | 11246 |
UniProt: | F5H877O43278 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.44e-33 | 253 |
endo-epithelial cell | 4.41e-22 | 42 |
endodermal cell | 1.80e-16 | 58 |
respiratory epithelial cell | 2.24e-12 | 13 |
germ line cell | 2.46e-09 | 7 |
germ cell | 2.46e-09 | 7 |
epithelial cell of alimentary canal | 5.15e-09 | 20 |
epithelial cell of tracheobronchial tree | 1.23e-08 | 9 |
epithelial cell of lower respiratory tract | 1.23e-08 | 9 |
general ecto-epithelial cell | 4.71e-08 | 14 |
kidney tubule cell | 1.85e-07 | 10 |
nephron tubule epithelial cell | 1.85e-07 | 10 |
embryonic stem cell | 7.60e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.11e-17 | 106 |
squamous cell carcinoma | 1.09e-11 | 14 |
cell type cancer | 1.26e-11 | 143 |
adenocarcinoma | 6.61e-08 | 25 |