FFCP PHASE1:Hg19::chr5:2752422..2752438,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=153571 | |EntrezGene=153571 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24226 | |HGNC=24226 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=160bp_to_uc011cmh.1,uc011cmi.1,uc011cmj.1_5end | |association_with_transcript=160bp_to_uc011cmh.1,uc011cmi.1,uc011cmj.1_5end | ||
|cluster_id=chr5:2752422..2752438,+ | |||
|coexpression_cluster_id=C2821 | |||
|description=CAGE_peak_5_at_C5orf38_5end | |description=CAGE_peak_5_at_C5orf38_5end | ||
|id=chr5:2752422..2752438,+ | |id=chr5:2752422..2752438,+ | ||
|ontology_enrichment_celltype=CL:0002620!2.86e-13!23;CL:0002251!5.55e-11!21;CL:0002076!7.54e-10!43;CL:0000057!1.24e-07!75 | |ontology_enrichment_celltype=CL:0002620!2.86e-13!23;CL:0002251!5.55e-11!21;CL:0002076!7.54e-10!43;CL:0000057!1.24e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002623;3.03e-14;3!CL:0000349;5.23e-14;19!CL:0002251;1.26e-10;20!CL:0000622;9.87e-09;5!CL:0002537;1.20e-08;5!CL:0000154;2.41e-07;6!CL:0002577;3.07e-07;3!CL:0002541;5.98e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.89e-14,3;CL:0000349,4.88e-14,19;CL:0002251,1.04e-10,20;CL:0000622,7.47e-09,5;CL:0002537,1.27e-08,5;CL:0000154,1.91e-07,6;CL:0002577,2.98e-07,3;CL:0002541,4.71e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!8.92e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.58e-11;4!DOID:1612;2.58e-11;4!DOID:4556;1.96e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.50e-11,4;DOID:1612,2.50e-11,4;DOID:4556,2.06e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.38e-15!95;UBERON:0002199!1.55e-13!45;UBERON:0002416!1.55e-13!45;UBERON:0002097!2.30e-12!40;UBERON:0003076!2.40e-09!15;UBERON:0003057!2.40e-09!15;UBERON:0003124!1.00e-08!7;UBERON:0004923!1.14e-08!57;UBERON:0001044!2.26e-08!6;UBERON:0003293!2.26e-08!6;UBERON:0003294!2.26e-08!6;UBERON:0010047!2.26e-08!6;UBERON:0000167!2.26e-08!6;UBERON:0004732!4.64e-08!13;UBERON:0005631!8.02e-08!14;UBERON:0000158!8.02e-08!14;UBERON:0004733!4.60e-07!12;UBERON:0002028!4.60e-07!12;UBERON:0007277!4.60e-07!12;UBERON:0002680!7.70e-07!9;UBERON:0001895!7.70e-07!9;UBERON:0010092!7.70e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;2.41e-12;6!UBERON:0003293;2.41e-12;6!UBERON:0003294;2.41e-12;6!UBERON:0010047;2.41e-12;6!UBERON:0003408;2.41e-12;6!UBERON:0000167;2.41e-12;6!UBERON:0003343;1.46e-11;4!UBERON:0004785;1.46e-11;4!UBERON:0000161;3.76e-11;19!UBERON:0000166;3.76e-11;19!UBERON:0005631;4.53e-11;10!UBERON:0000158;4.53e-11;10!UBERON:0000478;7.99e-11;24!UBERON:0000974;7.70e-08;6!UBERON:0000165;2.99e-07;28!UBERON:0003124;5.98e-07;3!UBERON:0000920;5.98e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.87e-15,14;UBERON:0000158,3.87e-15,14;UBERON:0001044,1.85e-12,6;UBERON:0003293,1.85e-12,6;UBERON:0003294,1.85e-12,6;UBERON:0010047,1.85e-12,6;UBERON:0000167,1.85e-12,6;UBERON:0003343,1.38e-11,4;UBERON:0004785,1.38e-11,4;UBERON:0003124,7.41e-11,7;UBERON:0000478,7.58e-11,24;UBERON:0000166,1.48e-09,22;UBERON:0004923,6.22e-09,66;UBERON:0003408,1.69e-07,10;UBERON:0000920,4.71e-07,3;UBERON:0000165,5.18e-07,29;UBERON:0000930,5.18e-07,29 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0,0,0,1.30592814099919,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0.492484232307152,1.42800483870977,0.626909442956176,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0,0,0.486634870302636,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,1.12135520028461,0,0.74000264525148,0,0,0,0,0,0.70296429550139,0.312160076830321,0,1.49448680551801,0.469737994575059,0.971237666208789,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0.213557388818567,0.635795703478686,0.900273288253207,0.618315175430633,0.257640540045629,0.744467425326359,0.337552664482532,0.487185025805993,1.00973509697646,0.828449087780694,1.13152239773168,0.355009592516614,0.403008392910561,0.339121184620975,0.193260853163297,0,0.286804595389004,0,0.132529768321485,0,0.207322110030741,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.329250856225877,0,0.301586917234893,0.185176890317059,0.651616610620649,1.03993478527958,0,0,0,0,0.462985512576611,0,4.74122638775565,2.57545848628462,0,0,0,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,0,0,3.63753085735511,3.32870879020994,0.907170879989041,0,0,0.280660094433074,0,0.511707249066704,0,0,0.308419387605311,0.710246901252508,0,0,0.348631135379878,0.362578348774867,0.200506470303285,0,0.114814448164607,0,0,0,0,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.576570202095319,0.382838137483752,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0.379473173765715,0.699869440489966,0,0,0,0.282431402330337,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62618933211459,2.07875276582847,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20855522170466,0.349839999984783,0,0.341380344856499,0,9.69189495248539,0,0,0,0,0.120596438625408,0,0.331737779793674,0.295547618953547,0.219385397153973,0,0.697118721393016,0,0,0.23056390438806,2.51321404347362,2.06430006651815,3.50901275705111,0.366390373607449,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,0.19980960958213,0,0,0,0,0,3.06402245001834,0,0,0.509991088181609,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.68978156359193,0.157611414598396,0.104909176269996,0,4.12360880465543,6.33320151154169,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0.533937062838473,0.471612915298998,0.414239055347196,0,0,0,0.638341257770182,0.544017803369474,0,0.919036730290385,1.31149052283922,0,0,0,0,0,0.221858103073705,0.18628920882415,0,1.12482367165896,0,0,0,0.468334905806882,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,1.04397716786085,0.226705925512272,0.231522474323834,0.734210113519403,0.179088841081487,0,0.438568099157414,0,0,0,0.256241518587947,0,0.607719912354764,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34064966502131,2.40171224485641,0.352675943690684,0,0.0642292250964595,0,0,0,0,0,0,1.42769420259154,3.53331786603692,0.11796972334774,6.9702867438238,11.6680922811842,0,0,0.994581110581374,0,0.20170506870352,0,5.76194727859129,0.163771917510097,0,0,0,0,0,0,2.19303106742873,0,0,4.85497225030462,0,0,0,0,0.266107110487916,0,0,0.40781839786099,0,0,0,0,0.157115589916002,1.68163297988273,0,0,0,0.214429632529969,0,0,0,0,1.65772931330429,3.24365106478505,2.76503864725637,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0.392616934229891,0.297046400327086,0.8453114551668,0,0,0,0,0.178553938605658,0,0,0,0.917458566809082,0.430018749454354,0.631086248772738,0,0,0,0,0,0,0,0.437062287854782,0,0,0,0.0918948995348449,0,0,0,0,0.20686599172379,0,0,0,0,0.224263725161227,0.0636471582781649,0,0,0,0,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p5@C5orf38 | |short_description=p5@C5orf38 | ||
}} | }} |
Latest revision as of 14:09, 17 September 2015
Short description: | p5@C5orf38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C5orf38_5end |
Coexpression cluster: | C2821_oral_large_pancreatic_Mesenchymal_keratoacanthoma_choriocarcinoma_breast |
Association with transcript: | 160bp_to_uc011cmh.1, uc011cmi.1, uc011cmj.1_5end |
EntrezGene: | C5orf38 |
HGNC: | 24226 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.89e-14 | 3 |
extraembryonic cell | 4.88e-14 | 19 |
epithelial cell of alimentary canal | 1.04e-10 | 20 |
acinar cell | 7.47e-09 | 5 |
amnion mesenchymal stem cell | 1.27e-08 | 5 |
protein secreting cell | 1.91e-07 | 6 |
placental epithelial cell | 2.98e-07 | 3 |
chorionic membrane mesenchymal stem cell | 4.71e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.87e-15 | 14 |
membranous layer | 3.87e-15 | 14 |
saliva-secreting gland | 1.85e-12 | 6 |
gland of oral region | 1.85e-12 | 6 |
gland of foregut | 1.85e-12 | 6 |
oral gland | 1.85e-12 | 6 |
oral cavity | 1.85e-12 | 6 |
mucosa of oral region | 1.38e-11 | 4 |
respiratory system mucosa | 1.38e-11 | 4 |
chorion | 7.41e-11 | 7 |
extraembryonic structure | 7.58e-11 | 24 |
oral opening | 1.48e-09 | 22 |
organ component layer | 6.22e-09 | 66 |
gland of gut | 1.69e-07 | 10 |
egg chorion | 4.71e-07 | 3 |
mouth | 5.18e-07 | 29 |
stomodeum | 5.18e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.50e-11 | 4 |
breast cancer | 2.50e-11 | 4 |
lung large cell carcinoma | 2.06e-07 | 3 |