FFCP PHASE1:Hg19::chr5:31193820..31193841,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:31193820..31193841,+
|short_description=p3@CDH6
|description=CAGE_peak_3_at_CDH6_5end
|association_with_transcript=-15bp_to_ENST00000265071,ENST00000514738...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1004 | |EntrezGene=1004 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1765 | |HGNC=1765 | ||
|TSSclassifier=strong | |||
|UniProt=P55285,D6RF86 | |UniProt=P55285,D6RF86 | ||
|association_with_transcript=-15bp_to_ENST00000265071,ENST00000514738_5end | |||
|cluster_id=chr5:31193820..31193841,+ | |||
|coexpression_cluster_id=C1958 | |||
|description=CAGE_peak_3_at_CDH6_5end | |||
|id=chr5:31193820..31193841,+ | |||
|ontology_enrichment_celltype=CL:0000359!3.01e-20!32;CL:0000192!6.37e-16!42;CL:0000514!6.37e-16!42;CL:0000183!1.77e-13!59;CL:0000055!1.44e-12!180;CL:0000187!2.68e-12!54;CL:0000680!1.93e-11!57;CL:0000056!1.93e-11!57;CL:0000355!1.93e-11!57;CL:0000393!1.01e-10!60;CL:0000211!1.01e-10!60;CL:0002539!8.19e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.33e-23;32!CL:0000192;7.96e-13;43!CL:0002539;1.03e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.83e-24,32;CL:0000192,5.64e-17,43;CL:0000514,5.64e-17,43;CL:0000187,1.18e-11,55;CL:0000680,1.80e-10,58;CL:0000056,1.80e-10,58;CL:0000355,1.80e-10,58;CL:0000393,4.55e-10,61;CL:0000211,4.55e-10,61;CL:0002539,1.08e-09,10 | |||
|ontology_enrichment_development_v019=CL:0000514;7.96e-13;43!UBERON:0005795;9.35e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;3.40e-16;33!UBERON:0004571;3.40e-16;33!UBERON:0001637;2.03e-13;42!UBERON:0003509;2.03e-13;42!UBERON:0004572;2.03e-13;42!UBERON:0004237;1.03e-09;10!UBERON:0004695;1.03e-09;10!UBERON:0002111;1.03e-09;10!UBERON:0004178;1.03e-09;10!UBERON:0000947;1.88e-08;21!UBERON:0010191;1.88e-08;21!UBERON:0001135;2.32e-07;15!UBERON:0006876;9.16e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,5.42e-20,42;UBERON:0003509,5.42e-20,42;UBERON:0004572,5.42e-20,42;UBERON:0004573,2.11e-18,33;UBERON:0004571,2.11e-18,33;UBERON:0000025,4.27e-17,192;UBERON:0004111,8.09e-14,240;UBERON:0002049,2.98e-12,78;UBERON:0007798,2.98e-12,78;UBERON:0003914,7.96e-12,117;UBERON:0002385,5.45e-11,64;UBERON:0001015,5.45e-11,64;UBERON:0000383,5.45e-11,64;UBERON:0000119,5.99e-11,309;UBERON:0010314,6.28e-11,132;UBERON:0001017,7.60e-11,81;UBERON:0003075,8.10e-11,82;UBERON:0007284,8.10e-11,82;UBERON:0007500,1.09e-10,59;UBERON:0001981,1.09e-10,59;UBERON:0004537,1.09e-10,59;UBERON:0006965,1.09e-10,59;UBERON:0000483,1.21e-10,306;UBERON:0001134,1.88e-10,62;UBERON:0002036,1.88e-10,62;UBERON:0003082,1.88e-10,62;UBERON:0001016,3.17e-10,89;UBERON:0000955,4.11e-10,68;UBERON:0006238,4.11e-10,68;UBERON:0002346,1.07e-09,86;UBERON:0004237,1.08e-09,10;UBERON:0004695,1.08e-09,10;UBERON:0002111,1.08e-09,10;UBERON:0004178,1.08e-09,10;UBERON:0004535,1.16e-09,109;UBERON:0004872,1.23e-09,83;UBERON:0003104,5.28e-09,160;UBERON:0009142,5.28e-09,160;UBERON:0001009,5.34e-09,112;UBERON:0007524,1.62e-08,73;UBERON:0003056,1.63e-08,61;UBERON:0000947,1.98e-08,21;UBERON:0010191,1.98e-08,21;UBERON:0001049,3.56e-08,56;UBERON:0005068,3.56e-08,56;UBERON:0006241,3.56e-08,56;UBERON:0007135,3.56e-08,56;UBERON:0007503,4.83e-08,78;UBERON:0003077,5.18e-08,72;UBERON:0007285,5.18e-08,72;UBERON:0000055,7.41e-08,68;UBERON:0002329,9.50e-08,71;UBERON:0003059,9.50e-08,71;UBERON:0007282,9.50e-08,71;UBERON:0004290,9.50e-08,71;UBERON:0009618,9.50e-08,71;UBERON:0000073,1.12e-07,53;UBERON:0002616,1.12e-07,53;UBERON:0001135,3.00e-07,15;UBERON:0006876,8.33e-07,11;UBERON:0000922,9.36e-07,592 | |||
|phase1_expression=0.363356758541113,0,0.563817616383885,6.00439790118782,0.893922188854576,0,0,0,0,0.982935746006035,0,0,0,2.47532705920093,7.62213964174206,6.05092631806598,3.01347264011988,5.84248072309899,5.36726078669558,10.5884109946038,4.28401451612931,9.40364164434263,1.71741592278634,1.09499540058307,2.76193807108566,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69490601792545,0.383587685530591,0,0,0.579386075843295,0,0,39.04287948876,46.1197146722133,44.0930624179493,3.53643503843824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,3.97577561356255,33.8103466144428,52.1692172404082,79.1669073266726,21.2801029319014,6.72813120170769,4.2699598291882,4.68668341992604,0.933633106199299,0.538842688278752,1.14423332179421,5.60022482286246,18.43762958336,0,0,0,0,0,0,0,0.204154171254893,0.737005903870608,0.619954687054593,20.1960485737949,7.66527480763526,0,0,0.336672227908132,0.750711119231785,0.277064115484183,10.0964852802593,9.50112166976961,1.80285670687916,1.47461838108027,0.538168907066586,0.427114777637135,0.211931901159562,0,0,2.57640540045629,1.30281799432113,8.10126394758078,4.09235421677034,0.252433774244115,0.368199594569197,6.7891343863901,0.710019185033229,0.403008392910561,0.508681776931463,0,0,0,0.609868530647977,0.530119073285941,1.97529702878181,7.87824018116815,1.7662459561294,1.09493207722749,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,20.0734338049275,0,0,0,0,0,0,14.4331342025273,10.6655972577071,93.1050945290066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0.672786506072164,1.74384027533312,1.1734125731352,9.43683525031778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,6.93310567237048,8.71533458600294,1.69954085009497,0,0,0,1.4377491329495,1.14861935834114,0,0.868687840005475,0,0,0,0,0,0,5.08189248444927,1.30139853857622,1.54657762555539,0.670065061337395,0,0,0,0,1.8403723757871,6.5022167737758,5.69656549769445,1.03985430765404,6.42344359669782,10.0929545621718,3.27995961979597,0,0,0,1.32845119707087,0.737476674166813,0.0868836144680828,2.54541504701563,1.71571711905428,0,0,0,0,0,0,2.23297027036899,4.14347327877769,0.561320188866147,1.02511319404561,8.18731598506726,2.89537058058494,0,0,0,0,1.55776328755086,0,0.120859449591622,0,0,14.9258782613989,25.8569458569538,12.3256950061859,2.70719767744447,13.7857453416902,1.56869953835371,1.46139224653261,32.0876951834342,0,0,3.02282282542995,0,8.67028600140329,13.0439341202262,0.509752546090077,2.49322802678617,0.895499018888713,0,0,2.3080511260475,0.984043937099117,0,0.618246069886334,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0,0.107420244868274,0,0.255679882248303,0,0,0,0,0,9.761756535243,156.146924027997,24.396304455621,10.7811753061631,24.486077394583,24.358123778102,19.6443672250155,20.6099836908467,1.86079184679834,26.575871676373,2.09693213316207,0,0,11.4553169253337,12.5591782431877,0,0.274537029736055,0.235624804691373,22.8466204177847,38.042477081522,36.2282272365524,0,4.6305563029944,14.7910205459458,2.18399858252777,2.82810863907426,10.1707304958219,20.9518830547527,17.2494133562717,14.4688792133742,0,0,11.3629811099114,3.0982349809975,10.1410416911607,0.573645408816206,0.294747123039363,11.0568025959188,0.354761064070598,0.633322905892992,0.658589785919804,0,0,0,0.670302275535787,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0.36408156524854,0,0,0,0,0,0,0.844016498463076,2.22617410045812,0,0,1.39473591775749,1.38141957765574,0,2.65898574505602,0,8.70910845453061,5.12249601539763,0,0,1.28236427328014,0,1.11136990144637,2.90799823828566,1.57705766875147,0,0,0,2.17499872630438,9.10347586283997,1.77977555204936,0,0,0,0.347249989866585,8.85741385813839,0.723578631752448,0,0.110579259931225,0,2.63262476584767,0,0,1.23120413606075,1.70913083770502,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0.158936578980379,9.49491290376122,6.36607951820676,0.565412285735763,0,0,1.06149077404007,1.83309043480088,0,0,0,0.606610196826093,3.21031058919516,5.62234669740814,0,0,0,0,0,3.36680037793539,2.02197054811161,0,0,1.32930774541437,0,0,0,0,0,17.7030933101834,0,0,1.7472666824203,0,0,0,0,0.872901148395775,0,2.48578814858586,0,0,2.27918865441163,0,0.0801588202515337,5.76323085796252,0,0,0.114536596165916,0,0,0,0,0,0,33.8634082552588,0,1.20084057741958,0.958337652243951,0,0,0,0.837847203816763,0.458320848023367,0,0,0,0.89268582976749,0.806201669840715,11.5295962733569,1.16495949527454,0,0,0,3.6418168160457,0,0.795229689809303,0.544813624446302,0,0,0,0,0,2.36923270966296,0,27.5819975547194,10.6482813914046,0,0,0,0,0.662091970365432,0,9.77399283156683,33.7046381568494,7.184921922407,0,0.082092520749339,0,0,0,0,3.36135686540031,0.66116300871345,0,0,1.06787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| ||
|short_description=p3@CDH6 | |||
}} | }} |
Latest revision as of 14:39, 17 September 2015
Short description: | p3@CDH6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDH6_5end |
Coexpression cluster: | C1958_mesodermal_Lens_Smooth_Ciliary_Fibroblast_teratocarcinoma_leiomyoma |
Association with transcript: | -15bp_to_ENST00000265071, ENST00000514738_5end |
EntrezGene: | CDH6 |
HGNC: | 1765 |
UniProt: | P55285D6RF86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.83e-24 | 32 |
smooth muscle cell | 5.64e-17 | 43 |
smooth muscle myoblast | 5.64e-17 | 43 |
muscle cell | 1.18e-11 | 55 |
muscle precursor cell | 1.80e-10 | 58 |
myoblast | 1.80e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.80e-10 | 58 |
electrically responsive cell | 4.55e-10 | 61 |
electrically active cell | 4.55e-10 | 61 |
aortic smooth muscle cell | 1.08e-09 | 10 |