FFCP PHASE1:Hg19::chr5:31639211..31639288,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23037 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18486 | |||
|TSSclassifier=strong | |||
|UniProt=E7EUJ3,O15018 | |||
|association_with_transcript=-228bp_to_ENST00000382161,ENST00000438447,uc003jhl.2_5end | |||
|cluster_id=chr5:31639211..31639288,+ | |||
|coexpression_cluster_id=C751 | |||
|description=CAGE_peak_1_at_PDZD2_5end | |||
|id=chr5:31639211..31639288,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.13e-14;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.11e-53!115;UBERON:0001049!6.81e-38!57;UBERON:0005068!6.81e-38!57;UBERON:0006241!6.81e-38!57;UBERON:0007135!6.81e-38!57;UBERON:0005743!8.79e-36!86;UBERON:0000073!1.19e-35!94;UBERON:0001016!1.19e-35!94;UBERON:0001017!3.39e-34!82;UBERON:0002616!1.61e-32!59;UBERON:0002346!4.27e-31!90;UBERON:0000955!8.11e-31!69;UBERON:0006238!8.11e-31!69;UBERON:0003075!1.38e-29!86;UBERON:0007284!1.38e-29!86;UBERON:0003080!4.82e-28!42;UBERON:0002780!1.11e-27!41;UBERON:0001890!1.11e-27!41;UBERON:0006240!1.11e-27!41;UBERON:0001893!2.55e-24!34;UBERON:0002020!2.57e-24!34;UBERON:0003528!2.57e-24!34;UBERON:0002791!1.50e-23!33;UBERON:0001869!4.87e-23!32;UBERON:0000924!1.51e-19!173;UBERON:0006601!1.51e-19!173;UBERON:0004121!2.73e-18!169;UBERON:0003056!2.86e-18!61;UBERON:0002619!9.52e-18!22;UBERON:0000956!1.49e-17!25;UBERON:0000203!1.49e-17!25;UBERON:0000153!5.59e-17!129;UBERON:0007811!5.59e-17!129;UBERON:0001950!1.99e-16!20;UBERON:0000033!1.07e-15!123;UBERON:0003076!8.54e-11!15;UBERON:0003057!8.54e-11!15;UBERON:0004732!1.32e-09!13;UBERON:0004733!5.54e-09!12;UBERON:0002028!5.54e-09!12;UBERON:0007277!5.54e-09!12;UBERON:0002308!3.05e-08!9;UBERON:0000125!3.05e-08!9;UBERON:0002420!3.13e-08!9;UBERON:0007245!3.13e-08!9;UBERON:0010009!3.13e-08!9;UBERON:0010011!3.13e-08!9;UBERON:0000454!3.13e-08!9;UBERON:0001871!6.14e-07!7;UBERON:0009663!7.36e-07!7;UBERON:0002680!8.83e-07!9;UBERON:0001895!8.83e-07!9;UBERON:0010092!8.83e-07!9;UBERON:0002298!9.22e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;9.31e-28;34!UBERON:0002020;9.31e-28;34!UBERON:0001893;9.87e-28;34!UBERON:0001869;1.38e-27;32!UBERON:0002791;1.99e-27;32!UBERON:0000073;6.93e-27;53!UBERON:0002616;6.93e-27;53!UBERON:0002619;1.49e-26;22!UBERON:0002780;1.79e-26;41!UBERON:0001890;1.79e-26;41!UBERON:0001950;1.67e-24;20!UBERON:0000956;1.95e-22;25!UBERON:0000203;1.95e-22;25!UBERON:0000955;2.73e-18;68!UBERON:0001017;7.06e-18;75!UBERON:0007023;1.37e-17;114!UBERON:0001016;1.26e-15;83!UBERON:0004732;6.87e-14;13!UBERON:0004733;6.28e-13;12!UBERON:0002028;6.28e-13;12!UBERON:0000922;5.70e-12;49!UBERON:0000125;6.77e-12;9!UBERON:0002308;6.77e-12;9!UBERON:0002420;7.38e-12;9!UBERON:0007245;7.38e-12;9!UBERON:0010009;7.38e-12;9!UBERON:0010011;7.38e-12;9!UBERON:0000454;7.38e-12;9!UBERON:0009663;9.17e-10;7!UBERON:0002680;1.53e-09;9!UBERON:0001895;1.53e-09;9!UBERON:0001871;8.64e-09;6!UBERON:0000200;2.23e-08;6!UBERON:0002298;3.31e-08;6!UBERON:0001872;2.55e-07;5!UBERON:0002021;3.94e-07;5!UBERON:0000349;5.10e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.58e-63,114;UBERON:0001049,9.92e-52,56;UBERON:0005068,9.92e-52,56;UBERON:0006241,9.92e-52,56;UBERON:0007135,9.92e-52,56;UBERON:0000073,1.04e-48,53;UBERON:0002616,1.04e-48,53;UBERON:0001017,2.64e-43,81;UBERON:0002346,8.77e-43,86;UBERON:0003075,1.32e-42,82;UBERON:0007284,1.32e-42,82;UBERON:0000955,8.79e-42,68;UBERON:0006238,8.79e-42,68;UBERON:0001016,3.40e-41,89;UBERON:0002780,1.30e-36,41;UBERON:0001890,1.30e-36,41;UBERON:0003080,1.30e-36,41;UBERON:0006240,1.30e-36,41;UBERON:0001893,9.41e-33,34;UBERON:0003528,9.52e-33,34;UBERON:0002020,9.52e-33,34;UBERON:0010371,2.68e-32,104;UBERON:0001869,8.91e-31,32;UBERON:0002791,1.46e-30,32;UBERON:0010314,3.40e-27,132;UBERON:0003056,1.43e-26,61;UBERON:0002619,1.47e-26,22;UBERON:0001950,1.63e-24,20;UBERON:0000956,1.92e-22,25;UBERON:0000203,1.92e-22,25;UBERON:0004121,2.70e-21,171;UBERON:0000924,2.70e-21,171;UBERON:0006601,2.70e-21,171;UBERON:0003076,8.28e-16,15;UBERON:0003057,8.28e-16,15;UBERON:0011216,9.62e-15,223;UBERON:0004732,5.66e-14,13;UBERON:0004733,5.16e-13,12;UBERON:0002028,5.16e-13,12;UBERON:0007277,5.16e-13,12;UBERON:0000025,8.10e-13,192;UBERON:0000125,7.15e-12,9;UBERON:0002308,7.15e-12,9;UBERON:0002420,7.42e-12,9;UBERON:0007245,7.42e-12,9;UBERON:0010009,7.42e-12,9;UBERON:0010011,7.42e-12,9;UBERON:0000454,7.42e-12,9;UBERON:0009663,9.53e-10,7;UBERON:0002680,1.26e-09,9;UBERON:0001895,1.26e-09,9;UBERON:0010092,1.26e-09,9;UBERON:0004111,3.84e-09,240;UBERON:0001871,8.59e-09,6;UBERON:0000200,2.26e-08,6;UBERON:0002298,3.47e-08,6;UBERON:0001872,2.64e-07,5;UBERON:0002021,3.74e-07,5;UBERON:0000349,5.02e-07,5 | |||
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| |||
|short_description=p1@PDZD2 | |||
}} |
Latest revision as of 14:59, 17 September 2015
Short description: | p1@PDZD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDZD2_5end |
Coexpression cluster: | C751_heart_pineal_left_cerebellum_pons_putamen_Mesothelial |
Association with transcript: | -228bp_to_ENST00000382161, ENST00000438447, uc003jhl.2_5end |
EntrezGene: | PDZD2 |
HGNC: | 18486 |
UniProt: | E7EUJ3O15018 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data