FFCP PHASE1:Hg19::chr9:6758138..6758160,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:6758138..6758160,+ to FFCP PHASE1:Hg19::chr9:6758138..6758160,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23081 | |EntrezGene=23081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17071 | |HGNC=17071 | ||
|TSSclassifier=strong | |||
|UniProt=F5GYH2 | |UniProt=F5GYH2 | ||
|association_with_transcript=20bp_to_ENST00000536108_5end | |||
|cluster_id=chr9:6758138..6758160,+ | |||
|description=CAGE_peak_7_at_KDM4C_5end | |||
|id=chr9:6758138..6758160,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.41e-20!140;CL:0002031!3.73e-19!124;CL:0000557!8.03e-19!71;CL:0002009!1.95e-18!65;CL:0000839!6.93e-18!70;CL:0002087!1.31e-17!119;CL:0000037!1.39e-17!172;CL:0000566!1.39e-17!172;CL:0002194!3.20e-17!63;CL:0000576!3.20e-17!63;CL:0000040!3.20e-17!63;CL:0000559!3.20e-17!63;CL:0002032!2.29e-16!165;CL:0000837!2.29e-16!165;CL:0000988!4.70e-16!182;CL:0000766!1.25e-15!76;CL:0000763!1.27e-14!112;CL:0000049!1.27e-14!112;CL:0000860!1.76e-13!45;CL:0002057!6.12e-13!42;CL:0000451!8.08e-08!10;CL:0000990!3.25e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.63e-10;33!CL:0002057;1.63e-10;33!CL:0000451;1.90e-10;10!CL:0000576;6.07e-10;48!CL:0000990;7.51e-10;8!CL:0000473;1.36e-09;39!CL:0000234;1.36e-09;39!CL:0000039;1.66e-08;7!CL:0000586;1.66e-08;7!CL:0000766;3.90e-07;69!CL:0000840;6.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.09e-23,67;CL:0002009,1.05e-22,61;CL:0000738,5.06e-22,136;CL:0000839,2.48e-21,66;CL:0002194,6.04e-21,59;CL:0000576,6.04e-21,59;CL:0000040,6.04e-21,59;CL:0000559,6.04e-21,59;CL:0000766,5.69e-20,72;CL:0002031,2.55e-19,120;CL:0002087,7.40e-18,115;CL:0000037,2.12e-17,168;CL:0000988,6.86e-17,177;CL:0000763,8.08e-17,108;CL:0000049,8.08e-17,108;CL:0002032,3.76e-16,161;CL:0000837,3.76e-16,161;CL:0000473,1.12e-14,48;CL:0000234,1.12e-14,48;CL:0000860,5.78e-14,42;CL:0002057,5.78e-14,42;CL:0000451,4.98e-11,10;CL:0000990,4.05e-10,8;CL:0000039,1.55e-08,7;CL:0000586,1.55e-08,7;CL:0000840,3.43e-07,5;CL:0001029,3.43e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.43e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.38e-17!102;UBERON:0003061!7.38e-17!102;UBERON:0002193!1.35e-16!112;UBERON:0001474!1.82e-16!86;UBERON:0002371!1.55e-15!80;UBERON:0004765!1.17e-12!101;UBERON:0001434!1.17e-12!101;UBERON:0002405!2.98e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.13e-20,98;UBERON:0003061,3.13e-20,98;UBERON:0001474,1.74e-19,82;UBERON:0002371,2.04e-19,76;UBERON:0002405,3.44e-18,93;UBERON:0002193,7.37e-18,108;UBERON:0004765,4.75e-16,90;UBERON:0001434,6.64e-14,100 | |||
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| ||
|short_description=p7@KDM4C | |||
}} | }} |
Latest revision as of 15:27, 17 September 2015
Short description: | p7@KDM4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_KDM4C_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000536108_5end |
EntrezGene: | KDM4C |
HGNC: | 17071 |
UniProt: | F5GYH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.09e-23 | 67 |
macrophage dendritic cell progenitor | 1.05e-22 | 61 |
leukocyte | 5.06e-22 | 136 |
myeloid lineage restricted progenitor cell | 2.48e-21 | 66 |
monopoietic cell | 6.04e-21 | 59 |
monocyte | 6.04e-21 | 59 |
monoblast | 6.04e-21 | 59 |
promonocyte | 6.04e-21 | 59 |
myeloid leukocyte | 5.69e-20 | 72 |
hematopoietic lineage restricted progenitor cell | 2.55e-19 | 120 |
nongranular leukocyte | 7.40e-18 | 115 |
hematopoietic stem cell | 2.12e-17 | 168 |
hematopoietic cell | 6.86e-17 | 177 |
myeloid cell | 8.08e-17 | 108 |
common myeloid progenitor | 8.08e-17 | 108 |
hematopoietic oligopotent progenitor cell | 3.76e-16 | 161 |
hematopoietic multipotent progenitor cell | 3.76e-16 | 161 |
defensive cell | 1.12e-14 | 48 |
phagocyte | 1.12e-14 | 48 |
classical monocyte | 5.78e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.78e-14 | 42 |
dendritic cell | 4.98e-11 | 10 |
conventional dendritic cell | 4.05e-10 | 8 |
germ line cell | 1.55e-08 | 7 |
germ cell | 1.55e-08 | 7 |
immature conventional dendritic cell | 3.43e-07 | 5 |
common dendritic progenitor | 3.43e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.13e-20 | 98 |
blood island | 3.13e-20 | 98 |
bone element | 1.74e-19 | 82 |
bone marrow | 2.04e-19 | 76 |
immune system | 3.44e-18 | 93 |
hemolymphoid system | 7.37e-18 | 108 |
skeletal element | 4.75e-16 | 90 |
skeletal system | 6.64e-14 | 100 |