FFCP PHASE1:Hg19::chr19:37019569..37019593,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:37019569..37019593,- to FFCP PHASE1:Hg19::chr19:37019569..37019593,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=339324 | |EntrezGene=339324 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13499 | |HGNC=13499 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000523638_5end | |||
|cluster_id=chr19:37019569..37019593,- | |||
|description=CAGE_peak_2_at_ZNF260_5end | |||
|id=chr19:37019569..37019593,- | |||
|ontology_enrichment_celltype=CL:0002319!4.21e-08!25 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.08e-16!235;DOID:14566!1.73e-15!239;DOID:0050687!6.30e-12!143;DOID:0050686!1.58e-09!137;DOID:305!1.07e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.76e-13,235;DOID:14566,5.58e-13,239;DOID:0050687,5.18e-09,143;DOID:0050686,1.49e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.64e-16!94;UBERON:0001016!4.64e-16!94;UBERON:0005743!4.51e-15!86;UBERON:0001017!5.68e-15!82;UBERON:0001049!2.53e-11!57;UBERON:0005068!2.53e-11!57;UBERON:0006241!2.53e-11!57;UBERON:0007135!2.53e-11!57;UBERON:0000955!8.38e-11!69;UBERON:0006238!8.38e-11!69;UBERON:0000924!3.74e-10!173;UBERON:0006601!3.74e-10!173;UBERON:0002346!4.51e-10!90;UBERON:0004121!1.57e-09!169;UBERON:0003075!2.18e-09!86;UBERON:0007284!2.18e-09!86;UBERON:0002616!3.12e-09!59;UBERON:0002780!8.32e-09!41;UBERON:0001890!8.32e-09!41;UBERON:0006240!8.32e-09!41;UBERON:0003080!3.91e-08!42;UBERON:0000033!2.98e-07!123;UBERON:0002020!4.26e-07!34;UBERON:0003528!4.26e-07!34;UBERON:0000153!4.67e-07!129;UBERON:0007811!4.67e-07!129;UBERON:0000956!5.99e-07!25;UBERON:0000203!5.99e-07!25;UBERON:0001893!6.58e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.93e-08;53!UBERON:0002616;1.93e-08;53!UBERON:0000956;2.38e-08;25!UBERON:0000203;2.38e-08;25!UBERON:0002780;1.23e-07;41!UBERON:0001890;1.23e-07;41!UBERON:0003528;2.78e-07;34!UBERON:0002020;2.78e-07;34!UBERON:0002791;2.97e-07;32!UBERON:0002619;3.90e-07;22!UBERON:0001016;4.35e-07;83!UBERON:0001869;6.55e-07;32!UBERON:0001893;9.68e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.37e-17,89;UBERON:0001017,2.92e-16,81;UBERON:0001049,3.51e-13,56;UBERON:0005068,3.51e-13,56;UBERON:0006241,3.51e-13,56;UBERON:0007135,3.51e-13,56;UBERON:0000073,1.23e-12,53;UBERON:0002616,1.23e-12,53;UBERON:0000955,1.44e-12,68;UBERON:0006238,1.44e-12,68;UBERON:0002346,1.80e-10,86;UBERON:0004121,2.47e-10,171;UBERON:0000924,2.47e-10,171;UBERON:0006601,2.47e-10,171;UBERON:0003075,3.07e-10,82;UBERON:0007284,3.07e-10,82;UBERON:0002780,3.53e-10,41;UBERON:0001890,3.53e-10,41;UBERON:0003080,3.53e-10,41;UBERON:0006240,3.53e-10,41;UBERON:0010371,2.67e-09,104;UBERON:0003056,3.54e-09,61;UBERON:0003528,1.01e-08,34;UBERON:0002020,1.01e-08,34;UBERON:0000956,1.31e-08,25;UBERON:0000203,1.31e-08,25;UBERON:0002791,4.10e-08,32;UBERON:0001893,4.48e-08,34;UBERON:0001869,6.82e-08,32;UBERON:0011216,2.06e-07,223;UBERON:0002619,2.72e-07,22 | |||
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| ||
|short_description=p2@ZNF260 | |||
}} | }} |
Latest revision as of 16:49, 17 September 2015
Short description: | p2@ZNF260 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZNF260_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000523638_5end |
EntrezGene: | ZNF260 |
HGNC: | 13499 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.37e-17 | 89 |
central nervous system | 2.92e-16 | 81 |
neural tube | 3.51e-13 | 56 |
neural rod | 3.51e-13 | 56 |
future spinal cord | 3.51e-13 | 56 |
neural keel | 3.51e-13 | 56 |
regional part of nervous system | 1.23e-12 | 53 |
regional part of brain | 1.23e-12 | 53 |
brain | 1.44e-12 | 68 |
future brain | 1.44e-12 | 68 |
neurectoderm | 1.80e-10 | 86 |
ectoderm-derived structure | 2.47e-10 | 171 |
ectoderm | 2.47e-10 | 171 |
presumptive ectoderm | 2.47e-10 | 171 |
neural plate | 3.07e-10 | 82 |
presumptive neural plate | 3.07e-10 | 82 |
regional part of forebrain | 3.53e-10 | 41 |
forebrain | 3.53e-10 | 41 |
anterior neural tube | 3.53e-10 | 41 |
future forebrain | 3.53e-10 | 41 |
ecto-epithelium | 2.67e-09 | 104 |
pre-chordal neural plate | 3.54e-09 | 61 |
brain grey matter | 1.01e-08 | 34 |
gray matter | 1.01e-08 | 34 |
cerebral cortex | 1.31e-08 | 25 |
pallium | 1.31e-08 | 25 |
regional part of telencephalon | 4.10e-08 | 32 |
telencephalon | 4.48e-08 | 34 |
cerebral hemisphere | 6.82e-08 | 32 |
organ system subdivision | 2.06e-07 | 223 |
regional part of cerebral cortex | 2.72e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.76e-13 | 235 |
disease of cellular proliferation | 5.58e-13 | 239 |
cell type cancer | 5.18e-09 | 143 |
organ system cancer | 1.49e-08 | 137 |