FFCP PHASE1:Hg19::chr13:50018344..50018397,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:50018344..50018397,+ to FFCP PHASE1:Hg19::chr13:50018344..50018397,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83852 | |EntrezGene=83852 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20263 | |HGNC=20263 | ||
|TSSclassifier=strong | |||
|UniProt=Q96T68 | |UniProt=Q96T68 | ||
|association_with_transcript=-31bp_to_ENST00000354234,NM_031915,uc001vcy.3,uc001vcz.2,uc010adg.2,uc010adh.2_5end | |||
|cluster_id=chr13:50018344..50018397,+ | |||
|description=CAGE_peak_3_at_SETDB2_5end | |||
|id=chr13:50018344..50018397,+ | |||
|ontology_enrichment_celltype=CL:0000557!2.36e-16!71;CL:0002057!1.28e-15!42;CL:0002194!1.55e-15!63;CL:0000576!1.55e-15!63;CL:0000040!1.55e-15!63;CL:0000559!1.55e-15!63;CL:0002009!2.20e-15!65;CL:0000766!2.59e-15!76;CL:0000763!3.23e-15!112;CL:0000049!3.23e-15!112;CL:0000839!6.51e-15!70;CL:0000860!1.01e-12!45;CL:0002032!4.47e-09!165;CL:0000837!4.47e-09!165;CL:0000037!7.03e-09!172;CL:0000566!7.03e-09!172;CL:0000738!2.62e-08!140;CL:0000988!1.02e-07!182;CL:0002031!1.44e-07!124;CL:0002087!2.21e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000576;8.25e-13;48!CL:0000473;5.41e-11;39!CL:0000234;5.41e-11;39!CL:0000860;1.44e-10;33!CL:0002057;1.44e-10;33!CL:0000766;1.45e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.58e-20,67;CL:0002194,3.98e-20,59;CL:0000576,3.98e-20,59;CL:0000040,3.98e-20,59;CL:0000559,3.98e-20,59;CL:0000766,5.10e-20,72;CL:0002009,1.48e-19,61;CL:0000839,7.75e-19,66;CL:0000763,2.61e-18,108;CL:0000049,2.61e-18,108;CL:0000473,6.87e-18,48;CL:0000234,6.87e-18,48;CL:0000860,2.79e-16,42;CL:0002057,2.79e-16,42;CL:0002032,3.86e-11,161;CL:0000837,3.86e-11,161;CL:0000037,6.73e-11,168;CL:0000738,9.28e-11,136;CL:0002087,1.31e-09,115;CL:0000988,1.33e-09,177;CL:0002031,1.64e-09,120;CL:0000219,3.48e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.61e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.70e-24!57;UBERON:0005068!1.70e-24!57;UBERON:0006241!1.70e-24!57;UBERON:0007135!1.70e-24!57;UBERON:0005743!1.51e-22!86;UBERON:0002616!3.92e-22!59;UBERON:0001017!1.16e-21!82;UBERON:0000073!2.25e-21!94;UBERON:0001016!2.25e-21!94;UBERON:0002780!2.87e-20!41;UBERON:0001890!2.87e-20!41;UBERON:0006240!2.87e-20!41;UBERON:0003080!6.54e-20!42;UBERON:0000955!5.29e-19!69;UBERON:0006238!5.29e-19!69;UBERON:0007023!3.01e-18!115;UBERON:0001893!7.88e-18!34;UBERON:0003075!8.00e-18!86;UBERON:0007284!8.00e-18!86;UBERON:0002346!8.34e-18!90;UBERON:0002020!1.01e-17!34;UBERON:0003528!1.01e-17!34;UBERON:0002791!2.94e-17!33;UBERON:0001869!1.03e-16!32;UBERON:0003056!6.34e-15!61;UBERON:0002371!5.98e-14!80;UBERON:0000956!1.24e-13!25;UBERON:0000203!1.24e-13!25;UBERON:0004765!1.71e-13!101;UBERON:0001434!1.71e-13!101;UBERON:0002619!2.08e-13!22;UBERON:0001474!2.67e-13!86;UBERON:0002390!1.99e-12!102;UBERON:0003061!1.99e-12!102;UBERON:0001950!3.43e-12!20;UBERON:0000153!2.93e-11!129;UBERON:0007811!2.93e-11!129;UBERON:0000033!4.37e-11!123;UBERON:0002193!1.51e-10!112;UBERON:0000924!2.17e-10!173;UBERON:0006601!2.17e-10!173;UBERON:0004121!3.41e-10!169;UBERON:0002405!7.37e-08!115;UBERON:0002204!9.99e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.62e-16;34!UBERON:0003528;2.50e-16;34!UBERON:0002020;2.50e-16;34!UBERON:0001869;3.37e-16;32!UBERON:0002791;3.75e-16;32!UBERON:0002780;8.41e-16;41!UBERON:0001890;8.41e-16;41!UBERON:0000956;1.33e-14;25!UBERON:0000203;1.33e-14;25!UBERON:0002619;1.69e-14;22!UBERON:0000073;2.10e-14;53!UBERON:0002616;2.10e-14;53!UBERON:0001950;3.66e-13;20!UBERON:0001017;5.89e-09;75!UBERON:0000955;1.70e-08;68!UBERON:0001016;5.27e-08;83 | |||
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| ||
|short_description=p3@SETDB2 | |||
}} | }} |
Latest revision as of 16:56, 17 September 2015
Short description: | p3@SETDB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SETDB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -31bp_to_ENST00000354234, NM_031915, uc001vcy.3, uc001vcz.2, uc010adg.2, uc010adh.2_5end |
EntrezGene: | SETDB2 |
HGNC: | 20263 |
UniProt: | Q96T68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.58e-20 | 67 |
monopoietic cell | 3.98e-20 | 59 |
monocyte | 3.98e-20 | 59 |
monoblast | 3.98e-20 | 59 |
promonocyte | 3.98e-20 | 59 |
myeloid leukocyte | 5.10e-20 | 72 |
macrophage dendritic cell progenitor | 1.48e-19 | 61 |
myeloid lineage restricted progenitor cell | 7.75e-19 | 66 |
myeloid cell | 2.61e-18 | 108 |
common myeloid progenitor | 2.61e-18 | 108 |
defensive cell | 6.87e-18 | 48 |
phagocyte | 6.87e-18 | 48 |
classical monocyte | 2.79e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.79e-16 | 42 |
hematopoietic oligopotent progenitor cell | 3.86e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.86e-11 | 161 |
hematopoietic stem cell | 6.73e-11 | 168 |
leukocyte | 9.28e-11 | 136 |
nongranular leukocyte | 1.31e-09 | 115 |
hematopoietic cell | 1.33e-09 | 177 |
hematopoietic lineage restricted progenitor cell | 1.64e-09 | 120 |
motile cell | 3.48e-07 | 386 |