FFCP PHASE1:Hg19::chr11:34460253..34460267,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:34460253..34460267,+
|short_description=p5@CAT
|description=CAGE_peak_5_at_CAT_5end
|association_with_transcript=-204bp_to_ENST00000241052,NM_001752_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=847 | |EntrezGene=847 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1516 | |HGNC=1516 | ||
|TSSclassifier=strong | |||
|UniProt=P04040 | |UniProt=P04040 | ||
|association_with_transcript=-204bp_to_ENST00000241052,NM_001752_5end | |||
|cluster_id=chr11:34460253..34460267,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_5_at_CAT_5end | |||
|id=chr11:34460253..34460267,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.14e-28;2!CL:0000558;3.14e-28;2!CL:0002549;7.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.14e-28,2;CL:0000765,3.14e-28,2;CL:0000050,3.14e-28,2;CL:0000038,3.14e-28,2;CL:0000558,3.14e-28,2;CL:0000547,3.14e-28,2;CL:0000549,3.14e-28,2;CL:0000550,3.14e-28,2;CL:0000552,3.14e-28,2;CL:0002549,8.04e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!2.21e-17!31;DOID:1240!7.14e-13!39;DOID:1036!2.56e-10!8;DOID:2531!8.02e-09!51;DOID:0060083!8.02e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:8552;1.84e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,2.11e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.65e-07!15;UBERON:0000179!1.65e-07!15;UBERON:0000463!1.65e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.40e-14;15!UBERON:0000179;1.40e-14;15!UBERON:0000463;1.40e-14;15!UBERON:0002135;1.84e-14;1!UBERON:0002171;1.84e-14;1!UBERON:0006518;1.84e-14;1!UBERON:0008949;1.84e-14;1!UBERON:0000101;1.84e-14;1!UBERON:0002167;1.84e-14;1!UBERON:0005629;7.03e-08;2!UBERON:0002133;7.03e-08;2!UBERON:0005358;7.03e-08;2!UBERON:0001886;7.03e-08;2!UBERON:0004086;7.03e-08;2!UBERON:0005282;7.03e-08;2!UBERON:0005281;7.03e-08;2!UBERON:0002390;7.80e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.24e-14,15;UBERON:0000179,1.24e-14,15;UBERON:0000463,1.24e-14,15;UBERON:0002171,1.61e-14,1;UBERON:0006518,1.61e-14,1;UBERON:0008949,1.61e-14,1;UBERON:0000101,1.61e-14,1;UBERON:0002167,1.61e-14,1;UBERON:0002135,2.75e-14,1;UBERON:0007023,1.65e-08,114;UBERON:0005629,8.04e-08,2;UBERON:0005358,8.04e-08,2;UBERON:0001886,8.04e-08,2;UBERON:0004086,8.04e-08,2;UBERON:0005282,8.04e-08,2;UBERON:0005281,8.04e-08,2;UBERON:0002133,8.60e-08,2 | |||
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| ||
|short_description=p5@CAT | |||
}} | }} |
Latest revision as of 17:48, 17 September 2015
Short description: | p5@CAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CAT_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -204bp_to_ENST00000241052, NM_001752_5end |
EntrezGene: | CAT |
HGNC: | 1516 |
UniProt: | P04040 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.14e-28 | 2 |
erythroblast | 3.14e-28 | 2 |
megakaryocyte-erythroid progenitor cell | 3.14e-28 | 2 |
erythroid progenitor cell | 3.14e-28 | 2 |
reticulocyte | 3.14e-28 | 2 |
proerythroblast | 3.14e-28 | 2 |
basophilic erythroblast | 3.14e-28 | 2 |
polychromatophilic erythroblast | 3.14e-28 | 2 |
orthochromatic erythroblast | 3.14e-28 | 2 |
fibroblast of choroid plexus | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.24e-14 | 15 |
haemolymphatic fluid | 1.24e-14 | 15 |
organism substance | 1.24e-14 | 15 |
lower lobe of right lung | 1.61e-14 | 1 |
right lung lobe | 1.61e-14 | 1 |
lower lobe of lung | 1.61e-14 | 1 |
lobe of lung | 1.61e-14 | 1 |
right lung | 1.61e-14 | 1 |
mitral valve | 2.75e-14 | 1 |
adult organism | 1.65e-08 | 114 |
vascular plexus | 8.04e-08 | 2 |
ventricle of nervous system | 8.04e-08 | 2 |
choroid plexus | 8.04e-08 | 2 |
brain ventricle | 8.04e-08 | 2 |
ventricular system of brain | 8.04e-08 | 2 |
ventricular system of central nervous system | 8.04e-08 | 2 |
atrioventricular valve | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 2.11e-14 | 1 |