FFCP PHASE1:Hg19::chr3:23958661..23958672,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:23958661..23958672,+ to FFCP PHASE1:Hg19::chr3:23958661..23958672,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6138 | |EntrezGene=6138 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10306 | |HGNC=10306 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003ccq.2_5end | |||
|cluster_id=chr3:23958661..23958672,+ | |||
|coexpression_cluster_id=C2409 | |||
|description=CAGE_peak_3_at_RPL15_5end | |||
|id=chr3:23958661..23958672,+ | |||
|ontology_enrichment_celltype=CL:0000012!8.02e-39!682;CL:0000548!2.32e-38!679;CL:0000004!2.32e-38!679;CL:0000255!2.32e-38!679;CL:0002321!7.21e-32!248;CL:0000220!1.93e-31!246;CL:0000144!4.54e-31!625;CL:0000055!7.41e-25!180;CL:0000003!2.59e-23!722;CL:0002371!3.10e-23!591;CL:0000222!1.35e-22!119;CL:0000066!3.24e-17!254;CL:0000393!6.21e-17!60;CL:0000211!6.21e-17!60;CL:0000183!2.52e-16!59;CL:0000680!2.60e-16!57;CL:0000056!2.60e-16!57;CL:0000355!2.60e-16!57;CL:0000187!2.43e-15!54;CL:0000192!4.97e-14!42;CL:0000514!4.97e-14!42;CL:0000359!1.15e-12!32;CL:0000063!6.95e-11!578;CL:0000057!7.82e-08!75;CL:0000076!9.53e-08!62;CL:0000213!1.36e-07!57;CL:0000215!1.36e-07!57;CL:0000221!2.69e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.79e-12;32!CL:0000192;9.41e-10;43!CL:0000187;8.24e-09;55!CL:0000393;1.38e-08;61!CL:0000211;1.38e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.74e-32,250;CL:0000222,1.85e-22,121;CL:0000066,1.90e-17,253;CL:0000393,2.08e-16,61;CL:0000211,2.08e-16,61;CL:0000680,8.78e-16,58;CL:0000056,8.78e-16,58;CL:0000355,8.78e-16,58;CL:0000187,8.11e-15,55;CL:0000192,1.90e-13,43;CL:0000514,1.90e-13,43;CL:0000359,1.15e-12,32;CL:0000076,4.19e-08,63;CL:0000213,8.27e-08,58;CL:0000215,8.27e-08,58;CL:0000221,1.22e-07,72;CL:0000057,1.88e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;9.41e-10;43!CL:0000355;2.84e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.53e-15!79;UBERON:0007798!2.53e-15!79;UBERON:0000486!4.88e-15!82;UBERON:0004290!8.38e-15!70;UBERON:0000914!1.81e-14!83;UBERON:0002329!1.81e-14!83;UBERON:0003077!1.81e-14!83;UBERON:0003059!1.81e-14!83;UBERON:0007282!1.81e-14!83;UBERON:0009618!1.81e-14!83;UBERON:0007285!1.81e-14!83;UBERON:0001637!5.67e-14!42;UBERON:0003509!5.67e-14!42;UBERON:0004572!5.67e-14!42;UBERON:0005256!7.81e-14!143;UBERON:0003914!1.92e-13!118;UBERON:0000490!7.76e-13!138;UBERON:0001134!1.24e-12!61;UBERON:0002036!1.24e-12!61;UBERON:0003082!1.24e-12!61;UBERON:0000055!1.61e-12!69;UBERON:0004872!2.18e-12!84;UBERON:0001981!3.83e-12!60;UBERON:0007500!3.83e-12!60;UBERON:0004537!3.83e-12!60;UBERON:0006965!3.83e-12!60;UBERON:0002385!3.65e-11!63;UBERON:0001015!3.65e-11!63;UBERON:0000383!3.65e-11!63;UBERON:0000119!1.23e-10!312;UBERON:0004573!2.71e-10!33;UBERON:0004571!2.71e-10!33;UBERON:0004535!2.94e-10!110;UBERON:0000483!4.40e-10!309;UBERON:0002100!4.77e-10!216;UBERON:0001009!5.82e-09!113;UBERON:0003104!5.85e-08!238;UBERON:0009142!5.85e-08!238;UBERON:0000475!1.58e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.11e-10;42!UBERON:0003509;4.11e-10;42!UBERON:0004572;4.11e-10;42!UBERON:0007500;2.65e-09;56!UBERON:0001981;2.65e-09;56!UBERON:0004537;2.65e-09;56!UBERON:0004573;3.32e-09;33!UBERON:0004571;3.32e-09;33!UBERON:0003914;1.95e-08;74!UBERON:0000055;1.15e-07;65!UBERON:0002049;1.26e-07;75!UBERON:0007798;1.26e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.51e-16,78;UBERON:0002049,6.21e-16,78;UBERON:0007798,6.21e-16,78;UBERON:0000486,1.13e-14,83;UBERON:0000490,1.27e-14,148;UBERON:0002329,2.11e-14,71;UBERON:0003059,2.11e-14,71;UBERON:0007282,2.11e-14,71;UBERON:0004290,2.11e-14,71;UBERON:0009618,2.11e-14,71;UBERON:0001637,5.66e-14,42;UBERON:0003509,5.66e-14,42;UBERON:0004572,5.66e-14,42;UBERON:0003077,5.90e-14,72;UBERON:0007285,5.90e-14,72;UBERON:0007524,7.44e-14,73;UBERON:0003914,9.40e-14,117;UBERON:0000055,4.26e-13,68;UBERON:0004872,6.63e-13,83;UBERON:0007500,9.23e-13,59;UBERON:0001981,9.23e-13,59;UBERON:0004537,9.23e-13,59;UBERON:0006965,9.23e-13,59;UBERON:0001134,3.04e-12,62;UBERON:0002036,3.04e-12,62;UBERON:0003082,3.04e-12,62;UBERON:0005256,2.17e-11,122;UBERON:0000119,2.58e-11,309;UBERON:0002385,8.10e-11,64;UBERON:0001015,8.10e-11,64;UBERON:0000383,8.10e-11,64;UBERON:0000483,9.65e-11,306;UBERON:0004535,1.19e-10,109;UBERON:0004573,2.71e-10,33;UBERON:0004571,2.71e-10,33;UBERON:0003104,2.75e-10,160;UBERON:0009142,2.75e-10,160;UBERON:0002100,4.63e-10,199;UBERON:0001009,2.62e-09,112 | |||
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| ||
|short_description=p3@RPL15 | |||
}} | }} |
Latest revision as of 19:49, 17 September 2015
Short description: | p3@RPL15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RPL15_5end |
Coexpression cluster: | C2409_embryonic_Mallassezderived_acute_Endothelial_Smooth_mucinous_iPS |
Association with transcript: | 0bp_to_uc003ccq.2_5end |
EntrezGene: | RPL15 |
HGNC: | 10306 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.74e-32 | 250 |
mesodermal cell | 1.85e-22 | 121 |
epithelial cell | 1.90e-17 | 253 |
electrically responsive cell | 2.08e-16 | 61 |
electrically active cell | 2.08e-16 | 61 |
muscle precursor cell | 8.78e-16 | 58 |
myoblast | 8.78e-16 | 58 |
multi-potent skeletal muscle stem cell | 8.78e-16 | 58 |
muscle cell | 8.11e-15 | 55 |
smooth muscle cell | 1.90e-13 | 43 |
smooth muscle myoblast | 1.90e-13 | 43 |
vascular associated smooth muscle cell | 1.15e-12 | 32 |
squamous epithelial cell | 4.19e-08 | 63 |
lining cell | 8.27e-08 | 58 |
barrier cell | 8.27e-08 | 58 |
ectodermal cell | 1.22e-07 | 72 |
fibroblast | 1.88e-07 | 76 |