FFCP PHASE1:Hg19::chr2:162273893..162273908,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10716 | |EntrezGene=10716 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11590 | |HGNC=11590 | ||
|TSSclassifier=strong | |||
|UniProt=F5H1Y7 | |UniProt=F5H1Y7 | ||
|association_with_transcript=-370bp_to_ENST00000539334_5end | |association_with_transcript=-370bp_to_ENST00000539334_5end | ||
|cluster_id=chr2:162273893..162273908,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_12_at_TBR1_5end | |description=CAGE_peak_12_at_TBR1_5end | ||
|id=chr2:162273893..162273908,+ | |id=chr2:162273893..162273908,+ | ||
|ontology_enrichment_celltype=CL:0000540!7.43e-08!6;CL:0000031!7.43e-08!6;CL:0000404!7.43e-08!6 | |ontology_enrichment_celltype=CL:0000540!7.43e-08!6;CL:0000031!7.43e-08!6;CL:0000404!7.43e-08!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.69e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;3.12e-99;20!UBERON:0002619;2.20e-90;22!UBERON:0000956;1.16e-79;25!UBERON:0000203;1.16e-79;25!UBERON:0001869;5.03e-63;32!UBERON:0001893;4.95e-58;34!UBERON:0002791;6.19e-55;32!UBERON:0003528;3.42e-50;34!UBERON:0002020;3.42e-50;34!UBERON:0002021;9.01e-43;5!UBERON:0001872;1.06e-41;5!UBERON:0002780;2.12e-35;41!UBERON:0001890;2.12e-35;41!UBERON:0000200;3.58e-35;6!UBERON:0001870;9.54e-26;3!UBERON:0000073;5.94e-22;53!UBERON:0002616;5.94e-22;53!UBERON:0001017;3.59e-18;75!UBERON:0002702;4.27e-18;2!UBERON:0000955;1.82e-17;68!UBERON:0001016;1.24e-13;83!UBERON:0002902;5.31e-10;1!UBERON:0009899;5.31e-10;1!UBERON:0002581;1.01e-09;1!UBERON:0007190;1.01e-09;1!UBERON:0002022;1.99e-09;1!UBERON:0007023;1.79e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.58e-99,20;UBERON:0002619,1.85e-90,22;UBERON:0000956,9.97e-80,25;UBERON:0000203,9.97e-80,25;UBERON:0001869,1.86e-70,32;UBERON:0001893,2.83e-66,34;UBERON:0002791,2.87e-62,32;UBERON:0003528,1.46e-58,34;UBERON:0002020,1.46e-58,34;UBERON:0002780,9.07e-55,41;UBERON:0001890,9.07e-55,41;UBERON:0003080,9.07e-55,41;UBERON:0006240,9.07e-55,41;UBERON:0002021,1.27e-42,5;UBERON:0000073,5.64e-42,53;UBERON:0002616,5.64e-42,53;UBERON:0001872,8.21e-42,5;UBERON:0001017,4.90e-41,81;UBERON:0000955,4.42e-40,68;UBERON:0006238,4.42e-40,68;UBERON:0001049,1.29e-39,56;UBERON:0005068,1.29e-39,56;UBERON:0006241,1.29e-39,56;UBERON:0007135,1.29e-39,56;UBERON:0001016,1.05e-36,89;UBERON:0003056,3.42e-36,61;UBERON:0000200,2.80e-35,6;UBERON:0003075,2.64e-26,82;UBERON:0007284,2.64e-26,82;UBERON:0001870,6.26e-26,3;UBERON:0002346,5.81e-25,86;UBERON:0010371,3.52e-20,104;UBERON:0007023,2.81e-18,114;UBERON:0002702,3.76e-18,2;UBERON:0004121,8.02e-18,171;UBERON:0000924,8.02e-18,171;UBERON:0006601,8.02e-18,171;UBERON:0010314,2.64e-15,132;UBERON:0011216,2.38e-14,223;UBERON:0002902,5.31e-10,1;UBERON:0009899,5.31e-10,1;UBERON:0002581,8.17e-10,1;UBERON:0007190,9.70e-10,1;UBERON:0000025,1.31e-09,192;UBERON:0002022,1.76e-09,1;UBERON:0004111,4.36e-07,240 | |||
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|short_description=p12@TBR1 | |short_description=p12@TBR1 | ||
}} | }} |
Latest revision as of 20:42, 17 September 2015
Short description: | p12@TBR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TBR1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -370bp_to_ENST00000539334_5end |
EntrezGene: | TBR1 |
HGNC: | 11590 |
UniProt: | F5H1Y7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data