FFCP PHASE1:Hg19::chr1:158801218..158801220,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4332 | |EntrezGene=4332 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7183 | |HGNC=7183 | ||
|TSSclassifier=strong | |||
|UniProt=P41218,Q5VUU6 | |UniProt=P41218,Q5VUU6 | ||
|association_with_transcript=50bp_to_NM_002432,uc001fsz.1_5end | |association_with_transcript=50bp_to_NM_002432,uc001fsz.1_5end | ||
|cluster_id=chr1:158801218..158801220,+ | |||
|coexpression_cluster_id=C2533 | |||
|description=CAGE_peak_9_at_MNDA_5end | |description=CAGE_peak_9_at_MNDA_5end | ||
|id=chr1:158801218..158801220,+ | |id=chr1:158801218..158801220,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.10e-74!42;CL:0000766!5.88e-70!76;CL:0002009!3.23e-69!65;CL:0000860!1.56e-68!45;CL:0002194!3.11e-65!63;CL:0000576!3.11e-65!63;CL:0000040!3.11e-65!63;CL:0000559!3.11e-65!63;CL:0000557!2.47e-62!71;CL:0000839!1.58e-57!70;CL:0000738!7.11e-55!140;CL:0000763!1.92e-51!112;CL:0000049!1.92e-51!112;CL:0002087!1.56e-46!119;CL:0000037!2.26e-43!172;CL:0000566!2.26e-43!172;CL:0002031!3.53e-42!124;CL:0002032!9.25e-41!165;CL:0000837!9.25e-41!165;CL:0000988!4.22e-40!182;CL:0002393!3.06e-13!9;CL:0002397!3.06e-13!9;CL:0000134!1.51e-12!358;CL:0002320!5.20e-12!365;CL:0000094!2.96e-11!8;CL:0000219!3.93e-10!390;CL:0000775!2.71e-09!3;CL:0000875!2.92e-08!3;CL:0002396!2.92e-08!3;CL:0000081!5.90e-08!11;CL:0000048!6.39e-08!430;CL:0000767!1.01e-07!3;CL:0000842!1.06e-07!3;CL:0000723!1.30e-07!436;CL:0000034!3.26e-07!444 | |ontology_enrichment_celltype=CL:0002057!3.10e-74!42;CL:0000766!5.88e-70!76;CL:0002009!3.23e-69!65;CL:0000860!1.56e-68!45;CL:0002194!3.11e-65!63;CL:0000576!3.11e-65!63;CL:0000040!3.11e-65!63;CL:0000559!3.11e-65!63;CL:0000557!2.47e-62!71;CL:0000839!1.58e-57!70;CL:0000738!7.11e-55!140;CL:0000763!1.92e-51!112;CL:0000049!1.92e-51!112;CL:0002087!1.56e-46!119;CL:0000037!2.26e-43!172;CL:0000566!2.26e-43!172;CL:0002031!3.53e-42!124;CL:0002032!9.25e-41!165;CL:0000837!9.25e-41!165;CL:0000988!4.22e-40!182;CL:0002393!3.06e-13!9;CL:0002397!3.06e-13!9;CL:0000134!1.51e-12!358;CL:0002320!5.20e-12!365;CL:0000094!2.96e-11!8;CL:0000219!3.93e-10!390;CL:0000775!2.71e-09!3;CL:0000875!2.92e-08!3;CL:0002396!2.92e-08!3;CL:0000081!5.90e-08!11;CL:0000048!6.39e-08!430;CL:0000767!1.01e-07!3;CL:0000842!1.06e-07!3;CL:0000723!1.30e-07!436;CL:0000034!3.26e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.59e-37;33!CL:0002057;7.59e-37;33!CL:0000576;8.69e-32;48!CL:0000473;3.30e-25;39!CL:0000234;3.30e-25;39!CL:0000775;8.15e-24;3!CL:0000766;7.37e-21;69!CL:0002393;7.21e-12;6!CL:0002397;7.21e-12;6!CL:0000763;1.16e-09;100!CL:0000094;2.89e-09;8!CL:0000738;3.69e-07;136!CL:0000081;7.42e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.75e-53,42;CL:0002057,1.75e-53,42;CL:0000473,2.15e-46,48;CL:0000234,2.15e-46,48;CL:0000766,4.31e-41,72;CL:0002194,1.83e-36,59;CL:0000576,1.83e-36,59;CL:0000040,1.83e-36,59;CL:0000559,1.83e-36,59;CL:0002009,3.51e-35,61;CL:0000839,2.61e-32,66;CL:0000557,8.70e-32,67;CL:0000763,2.73e-26,108;CL:0000049,2.73e-26,108;CL:0000775,6.75e-24,3;CL:0000738,3.83e-20,136;CL:0002087,2.98e-17,115;CL:0002032,1.92e-16,161;CL:0000837,1.92e-16,161;CL:0002031,2.12e-16,120;CL:0000037,1.33e-15,168;CL:0000988,1.28e-14,177;CL:0002393,2.36e-13,9;CL:0002397,2.36e-13,9;CL:0000094,2.70e-09,8;CL:0000081,7.07e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.84e-32;42!CL:0000049;5.44e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.02e-74!102;UBERON:0003061!7.02e-74!102;UBERON:0002193!1.80e-68!112;UBERON:0002371!6.31e-54!80;UBERON:0001474!2.72e-49!86;UBERON:0002405!8.03e-41!115;UBERON:0004765!4.19e-40!101;UBERON:0001434!4.19e-40!101;UBERON:0003081!4.73e-29!216;UBERON:0002204!2.45e-19!167;UBERON:0000178!1.09e-18!15;UBERON:0000179!1.09e-18!15;UBERON:0000463!1.09e-18!15;UBERON:0002384!6.60e-12!375;UBERON:0000926!1.31e-07!448;UBERON:0004120!1.31e-07!448;UBERON:0006603!1.31e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.28e-17;15!UBERON:0000179;3.28e-17;15!UBERON:0000463;3.28e-17;15!UBERON:0002390;2.09e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.79e-39,98;UBERON:0003061,6.79e-39,98;UBERON:0002193,5.80e-35,108;UBERON:0002371,1.10e-27,76;UBERON:0001474,1.92e-25,82;UBERON:0004765,6.50e-23,90;UBERON:0002405,4.48e-22,93;UBERON:0001434,2.59e-20,100;UBERON:0000178,2.68e-17,15;UBERON:0000179,2.68e-17,15;UBERON:0000463,2.68e-17,15;UBERON:0003081,8.72e-17,203;UBERON:0002204,7.27e-11,167;UBERON:0000926,2.46e-09,315;UBERON:0004120,2.46e-09,315;UBERON:0006603,2.46e-09,315 | |||
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|short_description=p9@MNDA | |short_description=p9@MNDA | ||
}} | }} |
Latest revision as of 21:39, 17 September 2015
Short description: | p9@MNDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MNDA_5end |
Coexpression cluster: | C2533_CD14_Neutrophils_Whole_Eosinophils_blood_Peripheral_CD14CD16 |
Association with transcript: | 50bp_to_NM_002432, uc001fsz.1_5end |
EntrezGene: | MNDA |
HGNC: | 7183 |
UniProt: | P41218Q5VUU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.75e-53 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.75e-53 | 42 |
defensive cell | 2.15e-46 | 48 |
phagocyte | 2.15e-46 | 48 |
myeloid leukocyte | 4.31e-41 | 72 |
monopoietic cell | 1.83e-36 | 59 |
monocyte | 1.83e-36 | 59 |
monoblast | 1.83e-36 | 59 |
promonocyte | 1.83e-36 | 59 |
macrophage dendritic cell progenitor | 3.51e-35 | 61 |
myeloid lineage restricted progenitor cell | 2.61e-32 | 66 |
granulocyte monocyte progenitor cell | 8.70e-32 | 67 |
myeloid cell | 2.73e-26 | 108 |
common myeloid progenitor | 2.73e-26 | 108 |
neutrophil | 6.75e-24 | 3 |
leukocyte | 3.83e-20 | 136 |
nongranular leukocyte | 2.98e-17 | 115 |
hematopoietic oligopotent progenitor cell | 1.92e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.92e-16 | 161 |
hematopoietic lineage restricted progenitor cell | 2.12e-16 | 120 |
hematopoietic stem cell | 1.33e-15 | 168 |
hematopoietic cell | 1.28e-14 | 177 |
intermediate monocyte | 2.36e-13 | 9 |
CD14-positive, CD16-positive monocyte | 2.36e-13 | 9 |
granulocyte | 2.70e-09 | 8 |
blood cell | 7.07e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.79e-39 | 98 |
blood island | 6.79e-39 | 98 |
hemolymphoid system | 5.80e-35 | 108 |
bone marrow | 1.10e-27 | 76 |
bone element | 1.92e-25 | 82 |
skeletal element | 6.50e-23 | 90 |
immune system | 4.48e-22 | 93 |
skeletal system | 2.59e-20 | 100 |
blood | 2.68e-17 | 15 |
haemolymphatic fluid | 2.68e-17 | 15 |
organism substance | 2.68e-17 | 15 |
lateral plate mesoderm | 8.72e-17 | 203 |
musculoskeletal system | 7.27e-11 | 167 |
mesoderm | 2.46e-09 | 315 |
mesoderm-derived structure | 2.46e-09 | 315 |
presumptive mesoderm | 2.46e-09 | 315 |