FFCP PHASE1:Hg19::chr1:158969727..158969749,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:158969727..158969749,+ to FFCP PHASE1:Hg19::chr1:158969727..158969749,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3428 | |EntrezGene=3428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5395 | |HGNC=5395 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000359709,uc001ftf.1_5end | |||
|cluster_id=chr1:158969727..158969749,+ | |||
|description=CAGE_peak_11_at_IFI16_5end | |||
|id=chr1:158969727..158969749,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.27e-13!180;CL:0000057!5.58e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0002564;1.07e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,1.25e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!2.13e-13!173;UBERON:0006601!2.13e-13!173;UBERON:0000475!4.08e-13!365;UBERON:0004121!4.96e-13!169;UBERON:0000153!4.22e-11!129;UBERON:0007811!4.22e-11!129;UBERON:0000481!4.32e-11!347;UBERON:0000033!7.86e-11!123;UBERON:0000073!4.85e-10!94;UBERON:0001016!4.85e-10!94;UBERON:0007023!2.48e-09!115;UBERON:0000468!1.22e-08!659;UBERON:0005743!1.73e-08!86;UBERON:0001017!2.37e-08!82;UBERON:0002346!7.74e-08!90;UBERON:0000955!1.29e-07!69;UBERON:0006238!1.29e-07!69;UBERON:0003075!1.57e-07!86;UBERON:0007284!1.57e-07!86;UBERON:0001049!2.48e-07!57;UBERON:0005068!2.48e-07!57;UBERON:0006241!2.48e-07!57;UBERON:0007135!2.48e-07!57;UBERON:0002616!2.83e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;9.93e-08;5!UBERON:0002216;9.93e-08;5!UBERON:0011134;9.93e-08;5!UBERON:0002209;9.93e-08;5!UBERON:0002213;9.93e-08;5!UBERON:0007844;9.93e-08;5!UBERON:0011138;9.93e-08;5!UBERON:0001130;9.93e-08;5!UBERON:0001066;9.93e-08;5!UBERON:0001468;9.93e-08;5!UBERON:0002242;1.07e-07;3!UBERON:0004905;8.93e-07;8!UBERON:0000982;8.93e-07;8!UBERON:0004770;8.93e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.17e-07,5;UBERON:0002216,1.17e-07,5;UBERON:0011134,1.17e-07,5;UBERON:0002209,1.17e-07,5;UBERON:0002213,1.17e-07,5;UBERON:0005856,1.17e-07,5;UBERON:0005866,1.17e-07,5;UBERON:0005863,1.17e-07,5;UBERON:0007844,1.17e-07,5;UBERON:0011138,1.17e-07,5;UBERON:0001130,1.17e-07,5;UBERON:0001066,1.17e-07,5;UBERON:0001468,1.17e-07,5;UBERON:0002242,1.25e-07,3;UBERON:0003068,1.25e-07,3;UBERON:0002328,1.25e-07,3;UBERON:0004880,1.25e-07,3;UBERON:0004905,6.26e-07,8;UBERON:0000982,6.26e-07,8;UBERON:0004770,6.26e-07,8 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.845726424575827,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,3.34169152992126,0.994192127183747,0.672325146451775,0.602694528023977,0,0,0.369363174230364,0.204000691244253,0.626909442956176,0.572471974262113,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0.361439152384566,0.50133791063589,1.01392563272577,1.5905718941022,0.973269740605272,0.850813354476611,0.443458794925128,0.43917392846563,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,1.06729878806013,0,0,0,0,0,0,1.07159673940896,0,0,0,0,0.183201743930407,0,0,0,1.49091585508596,0.886413581652058,0.529636723252875,0.860509862246441,1.06400514659507,1.68203280042692,1.06748995729705,0,0.933633106199299,0.67355336034844,0.490385709340376,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0.448346041655403,0.352303495931295,0.161872944368132,0.280901613404497,2.24569588380383,0.245668634623536,2.6864703105699,3.56400857184616,0.989067717114227,0,0,0.336672227908132,0.750711119231785,0.554128230968366,1.31693286264251,0.30648779579902,0.600952235626387,0.113432183160021,0.179389635688862,1.2813443329114,1.48352330811693,0.300091096084402,1.44273540933814,0.772921620136887,0.744467425326359,0.337552664482532,0.974370051611986,1.26216887122057,1.28869858099219,3.55621325001386,0.710019185033229,0.201504196455281,0.508681776931463,0.386521706326594,0,0.286804595389004,0.121973706129595,0,0.464775771478074,0,0,0,1.56449532329816,0,1.38134921352481,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0,0.277765335475589,0,0,1.44331342025273,0.231860809950154,0.587043471179108,0,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0.268675568108545,0.290633938513962,0,0,0,0,0,0.12624243342638,0.063497894292169,0.763976851116555,0,0,0,0.300343057843917,0.571652865261156,0.336393253036082,0,0.4400297149257,0.258543431515556,0,0.845302752556,1.06375246633948,1.04007436911366,0.257207374262142,0,0.266422179016099,1.00084595560703,1.62786481617433,0,0,1.06617584622764,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,1.42636905040718,0,0.61642896765115,0.358121926479791,0,0,0,0,0.508189248444927,0,0,2.84777651068393,1.27587750330633,0,0,0,5.88919160251872,3.50119364741774,2.17012018959788,0.831883446123229,0.713715955188647,1.10391690523754,0.468565659970853,1.50473049863859,0,1.03473071292505,1.32845119707087,0,0.955719759148911,0.587403472388222,1.02943027143257,0,0,0,0,0,0.30239029332968,0.992431231275107,0.61384789315225,0.561320188866147,0.640695746278505,0,0.804269605718038,0,0,0.177561725313127,0.410635780069046,0,0.232420756919918,0,0,0,0.114814448164607,0.364182336013434,0.524497659837696,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62689197332152,0.515205058238611,0.183138929636687,0.82509499920588,0,0,0,1.7400729292582,0,0.767518373630648,0.137836572484531,4.18938954986267,0.870100163485371,0.255679882248303,1.78064071293475,0,0.192190067365106,0.255225424989168,0,0.464845549297286,0.31481234683064,0,0.924100740528266,0,0,0,0,0.744316738719335,0.632758849437452,0.190630193923825,0,1.28381696410176,0.636406495851874,0.78494864019923,1.07923474549989,0.274537029736055,0.589062011728432,0,0,0.421258456238981,0.48763373908959,0,0,1.09199929126389,0.424216295861138,1.13008116620243,1.10273068709225,0,0,0.578775534266688,3.27947376023316,0,0,0,1.29070216983646,1.17898849215745,0,0.709522128141196,0.844430541190656,1.97576935775941,0,0.349934720244983,0,0.670302275535787,0,0.470719003883896,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63714722689409,0,0,0,0.23874448473769,0.296964680832639,0,0,1.40669416410513,2.22617410045812,0,0,0.996239941255349,0,0,0.306806047506464,0,0,0,0,0,1.28236427328014,0,0,0,1.29875337426592,1.99613798001194,0,0,1.44999915086959,0.568967241427498,0.762760950878299,0,0,0.291604613383254,0.173624994933292,0.885741385813839,0.361789315876224,1.52581736317083,0.331737779793674,0,0.658156191461918,0,0.139423744278603,3.53971189117467,1.36730467016401,0,0,0,0.31900115973192,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973033209536731,0.611030144933625,0,0,0,0.808813595768125,0,0.468528891450678,0,1.17398771359254,0.485560759068186,0.789168805698781,0,1.83643656978294,2.33790344625405,0.300646838828985,0.103688191397247,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0.609414446062818,1.92199335066233,0,0,0.146178634172371,0,0.678923115418936,0.176512253383001,0,0.274083849293502,0,0.633107959558787,0,0.480952921509202,1.06726497369676,0.39961921916426,0,0,0,0.432164393964449,0.372757606696298,0.471388069233591,0.135904206073614,0.627617077873999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| 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| ||
|short_description=p11@IFI16 | |||
}} | }} |
Latest revision as of 21:50, 17 September 2015
Short description: | p11@IFI16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_IFI16_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000359709, uc001ftf.1_5end |
EntrezGene: | IFI16 |
HGNC: | 5395 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 1.25e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 1.17e-07 | 5 |
symphysis | 1.17e-07 | 5 |
nonsynovial joint | 1.17e-07 | 5 |
fibrous joint | 1.17e-07 | 5 |
cartilaginous joint | 1.17e-07 | 5 |
developing mesenchymal condensation | 1.17e-07 | 5 |
pre-cartilage condensation | 1.17e-07 | 5 |
cartilaginous condensation | 1.17e-07 | 5 |
cartilage element | 1.17e-07 | 5 |
post-cranial axial skeletal system | 1.17e-07 | 5 |
vertebral column | 1.17e-07 | 5 |
intervertebral disk | 1.17e-07 | 5 |
intervertebral joint | 1.17e-07 | 5 |
nucleus pulposus | 1.25e-07 | 3 |
axial mesoderm | 1.25e-07 | 3 |
notochord | 1.25e-07 | 3 |
chordamesoderm | 1.25e-07 | 3 |
articulation | 6.26e-07 | 8 |
skeletal joint | 6.26e-07 | 8 |
articular system | 6.26e-07 | 8 |