FFCP PHASE1:Hg19::chr9:79307036..79307049,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:79307036..79307049,- to FFCP PHASE1:Hg19::chr9:79307036..79307049,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=158471 | |EntrezGene=158471 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25209 | |HGNC=25209 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_ENST00000488346_5end | |||
|cluster_id=chr9:79307036..79307049,- | |||
|description=CAGE_peak_8_at_PRUNE2_5end | |||
|id=chr9:79307036..79307049,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.52e-19;3!UBERON:0006601;3.61e-13;82!UBERON:0010122;1.61e-12;2!UBERON:0006222;2.83e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.75e-07;1!DOID:4549;1.75e-07;1!DOID:5861;1.75e-07;1!DOID:6496;1.75e-07;1!DOID:6193;2.83e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.75e-07,1;DOID:4549,1.75e-07,1;DOID:5861,1.75e-07,1;DOID:6496,1.75e-07,1;DOID:6193,3.60e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.78e-61!82;UBERON:0001049!3.03e-60!57;UBERON:0005068!3.03e-60!57;UBERON:0006241!3.03e-60!57;UBERON:0007135!3.03e-60!57;UBERON:0002616!5.58e-60!59;UBERON:0005743!1.29e-57!86;UBERON:0000955!7.60e-55!69;UBERON:0006238!7.60e-55!69;UBERON:0000073!3.72e-54!94;UBERON:0001016!3.72e-54!94;UBERON:0002780!6.04e-50!41;UBERON:0001890!6.04e-50!41;UBERON:0006240!6.04e-50!41;UBERON:0003080!1.73e-48!42;UBERON:0001893!6.08e-42!34;UBERON:0002020!9.57e-42!34;UBERON:0003528!9.57e-42!34;UBERON:0003075!3.28e-40!86;UBERON:0007284!3.28e-40!86;UBERON:0002791!3.44e-40!33;UBERON:0001869!2.34e-39!32;UBERON:0002346!1.02e-37!90;UBERON:0007023!1.95e-35!115;UBERON:0003056!7.99e-30!61;UBERON:0000153!4.30e-28!129;UBERON:0007811!4.30e-28!129;UBERON:0000956!5.14e-28!25;UBERON:0000203!5.14e-28!25;UBERON:0000033!7.91e-28!123;UBERON:0004121!1.93e-25!169;UBERON:0000924!1.97e-24!173;UBERON:0006601!1.97e-24!173;UBERON:0002619!2.81e-23!22;UBERON:0001950!3.73e-20!20;UBERON:0000025!7.37e-17!194;UBERON:0002420!8.04e-16!9;UBERON:0007245!8.04e-16!9;UBERON:0010009!8.04e-16!9;UBERON:0010011!8.04e-16!9;UBERON:0000454!8.04e-16!9;UBERON:0002308!2.40e-15!9;UBERON:0000125!2.40e-15!9;UBERON:0004111!1.62e-13!241;UBERON:0000477!1.14e-12!286;UBERON:0003076!1.16e-12!15;UBERON:0003057!1.16e-12!15;UBERON:0009663!1.21e-12!7;UBERON:0000200!1.19e-11!6;UBERON:0004733!3.70e-11!12;UBERON:0002028!3.70e-11!12;UBERON:0007277!3.70e-11!12;UBERON:0004732!3.91e-10!13;UBERON:0000349!5.93e-10!5;UBERON:0000483!1.10e-09!309;UBERON:0002680!1.80e-09!9;UBERON:0001895!1.80e-09!9;UBERON:0010092!1.80e-09!9;UBERON:0000119!1.99e-09!312;UBERON:0001894!3.10e-09!7;UBERON:0006222!3.10e-09!7;UBERON:0000369!1.01e-08!4;UBERON:0002435!1.01e-08!4;UBERON:0000204!1.01e-08!4;UBERON:0010082!1.01e-08!4;UBERON:0001871!3.84e-08!7;UBERON:0002298!1.51e-07!8;UBERON:0000064!2.69e-07!219;UBERON:0000475!3.87e-07!365;UBERON:0005383!6.60e-07!3;UBERON:0005382!6.60e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.55e-65;32!UBERON:0001893;1.28e-61;34!UBERON:0002791;2.26e-61;32!UBERON:0003528;1.13e-58;34!UBERON:0002020;1.13e-58;34!UBERON:0000956;1.45e-52;25!UBERON:0000203;1.45e-52;25!UBERON:0002619;3.49e-52;22!UBERON:0001950;1.18e-49;20!UBERON:0002780;9.93e-42;41!UBERON:0001890;9.93e-42;41!UBERON:0000073;4.84e-39;53!UBERON:0002616;4.84e-39;53!UBERON:0000369;9.26e-24;4!UBERON:0002435;9.26e-24;4!UBERON:0000204;9.26e-24;4!UBERON:0000200;1.06e-23;6!UBERON:0000955;1.67e-23;68!UBERON:0001017;6.67e-22;75!UBERON:0002021;4.16e-18;5!UBERON:0001870;4.47e-18;3!UBERON:0005383;4.47e-18;3!UBERON:0005382;4.47e-18;3!UBERON:0001016;1.47e-16;83!UBERON:0002680;2.42e-16;9!UBERON:0001895;2.42e-16;9!UBERON:0002420;5.11e-16;9!UBERON:0000125;5.11e-16;9!UBERON:0007245;5.11e-16;9!UBERON:0002308;5.11e-16;9!UBERON:0010009;5.11e-16;9!UBERON:0010011;5.11e-16;9!UBERON:0000454;5.11e-16;9!UBERON:0009663;1.17e-13;7!UBERON:0001873;1.61e-12;2!UBERON:0002702;1.61e-12;2!UBERON:0004733;3.36e-12;12!UBERON:0002028;3.36e-12;12!UBERON:0007023;3.71e-12;114!UBERON:0004732;3.04e-11;13!UBERON:0000349;3.19e-11;5!UBERON:0001872;7.53e-11;5!UBERON:0002037;7.84e-10;6!UBERON:0000988;2.11e-08;3!UBERON:0001871;9.74e-08;6!UBERON:0001882;2.03e-07;1!UBERON:0005403;2.03e-07;1!UBERON:0001874;2.83e-07;1!UBERON:0003112;2.83e-07;1!UBERON:0011158;2.83e-07;1!UBERON:0007190;2.83e-07;1!UBERON:0003128;2.83e-07;1!UBERON:0001703;2.83e-07;1!UBERON:0002241;2.83e-07;1!UBERON:0002581;6.48e-07;1!UBERON:0002902;6.48e-07;1!UBERON:0002022;6.48e-07;1!UBERON:0009899;6.48e-07;1!UBERON:0011216;6.88e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.25e-72,53;UBERON:0002616,1.25e-72,53;UBERON:0001869,4.39e-72,32;UBERON:0001049,1.58e-68,56;UBERON:0005068,1.58e-68,56;UBERON:0006241,1.58e-68,56;UBERON:0007135,1.58e-68,56;UBERON:0001893,1.03e-67,34;UBERON:0003528,1.73e-67,34;UBERON:0002020,1.73e-67,34;UBERON:0002791,4.66e-65,32;UBERON:0002780,1.61e-61,41;UBERON:0001890,1.61e-61,41;UBERON:0003080,1.61e-61,41;UBERON:0006240,1.61e-61,41;UBERON:0000955,8.23e-55,68;UBERON:0006238,8.23e-55,68;UBERON:0001017,9.04e-53,81;UBERON:0000956,1.71e-52,25;UBERON:0000203,1.71e-52,25;UBERON:0002619,4.02e-52,22;UBERON:0001950,1.39e-49,20;UBERON:0001016,4.60e-47,89;UBERON:0003075,2.19e-45,82;UBERON:0007284,2.19e-45,82;UBERON:0002346,4.73e-43,86;UBERON:0003056,3.47e-40,61;UBERON:0010371,9.58e-35,104;UBERON:0007023,1.84e-31,114;UBERON:0010314,1.40e-28,132;UBERON:0000200,5.20e-24,6;UBERON:0000369,5.66e-24,4;UBERON:0002435,5.66e-24,4;UBERON:0000204,5.66e-24,4;UBERON:0010082,5.66e-24,4;UBERON:0004121,3.22e-22,171;UBERON:0000924,3.22e-22,171;UBERON:0006601,3.22e-22,171;UBERON:0011216,1.42e-18,223;UBERON:0005383,2.65e-18,3;UBERON:0005382,2.65e-18,3;UBERON:0001870,4.23e-18,3;UBERON:0000025,6.45e-18,192;UBERON:0002021,8.57e-18,5;UBERON:0002680,2.14e-16,9;UBERON:0001895,2.14e-16,9;UBERON:0010092,2.14e-16,9;UBERON:0000125,4.04e-16,9;UBERON:0002308,4.04e-16,9;UBERON:0002420,4.73e-16,9;UBERON:0007245,4.73e-16,9;UBERON:0010009,4.73e-16,9;UBERON:0010011,4.73e-16,9;UBERON:0000454,4.73e-16,9;UBERON:0009663,8.91e-14,7;UBERON:0004111,3.19e-13,240;UBERON:0001873,1.14e-12,2;UBERON:0010122,1.14e-12,2;UBERON:0002702,1.44e-12,2;UBERON:0004733,3.06e-12,12;UBERON:0002028,3.06e-12,12;UBERON:0007277,3.06e-12,12;UBERON:0004732,2.80e-11,13;UBERON:0000349,3.94e-11,5;UBERON:0001872,4.84e-11,5;UBERON:0002037,7.63e-10,6;UBERON:0006215,7.63e-10,6;UBERON:0003076,9.67e-10,15;UBERON:0003057,9.67e-10,15;UBERON:0000483,3.69e-09,306;UBERON:0000119,5.13e-09,309;UBERON:0000988,1.88e-08,3;UBERON:0001871,1.10e-07,6;UBERON:0001882,2.10e-07,1;UBERON:0005403,2.10e-07,1;UBERON:0001874,2.37e-07,1;UBERON:0007190,2.84e-07,1;UBERON:0003112,3.40e-07,1;UBERON:0011158,3.40e-07,1;UBERON:0003128,3.40e-07,1;UBERON:0001703,3.40e-07,1;UBERON:0002241,3.40e-07,1;UBERON:0004761,3.40e-07,1;UBERON:0009617,3.40e-07,1;UBERON:0002581,4.31e-07,1;UBERON:0002022,5.45e-07,1;UBERON:0002902,8.18e-07,1;UBERON:0009899,8.18e-07,1 | |||
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| ||
|short_description=p8@PRUNE2 | |||
}} | }} |
Latest revision as of 21:51, 17 September 2015
Short description: | p8@PRUNE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PRUNE2_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_ENST00000488346_5end |
EntrezGene: | PRUNE2 |
HGNC: | 25209 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.75e-07 | 1 |
extraosseous chondrosarcoma | 1.75e-07 | 1 |
myxoid chondrosarcoma | 1.75e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 1.75e-07 | 1 |
epithelioid sarcoma | 3.60e-07 | 1 |