FFCP PHASE1:Hg19::chr1:159796620..159796645,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56833 | |EntrezGene=56833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21391 | |HGNC=21391 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENST00000368104_5end | |association_with_transcript=19bp_to_ENST00000368104_5end | ||
|cluster_id=chr1:159796620..159796645,+ | |||
|coexpression_cluster_id=C1153 | |||
|description=CAGE_peak_3_at_SLAMF8_5end | |description=CAGE_peak_3_at_SLAMF8_5end | ||
|id=chr1:159796620..159796645,+ | |id=chr1:159796620..159796645,+ | ||
|ontology_enrichment_celltype=CL:0002009!2.66e-35!65;CL:0000557!1.42e-33!71;CL:0002194!5.07e-33!63;CL:0000576!5.07e-33!63;CL:0000040!5.07e-33!63;CL:0000559!5.07e-33!63;CL:0000839!1.10e-30!70;CL:0000766!3.81e-28!76;CL:0002057!1.67e-25!42;CL:0000860!5.15e-23!45;CL:0002031!1.26e-16!124;CL:0000763!6.10e-16!112;CL:0000049!6.10e-16!112;CL:0002087!2.31e-15!119;CL:0000738!3.78e-14!140;CL:0002032!4.85e-09!165;CL:0000837!4.85e-09!165;CL:0000840!1.40e-08!5;CL:0001029!1.40e-08!5;CL:0000037!1.42e-08!172;CL:0000566!1.42e-08!172;CL:0000988!2.55e-07!182 | |ontology_enrichment_celltype=CL:0002009!2.66e-35!65;CL:0000557!1.42e-33!71;CL:0002194!5.07e-33!63;CL:0000576!5.07e-33!63;CL:0000040!5.07e-33!63;CL:0000559!5.07e-33!63;CL:0000839!1.10e-30!70;CL:0000766!3.81e-28!76;CL:0002057!1.67e-25!42;CL:0000860!5.15e-23!45;CL:0002031!1.26e-16!124;CL:0000763!6.10e-16!112;CL:0000049!6.10e-16!112;CL:0002087!2.31e-15!119;CL:0000738!3.78e-14!140;CL:0002032!4.85e-09!165;CL:0000837!4.85e-09!165;CL:0000840!1.40e-08!5;CL:0001029!1.40e-08!5;CL:0000037!1.42e-08!172;CL:0000566!1.42e-08!172;CL:0000988!2.55e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000473;4.06e-23;39!CL:0000234;4.06e-23;39!CL:0000235;8.91e-23;6!CL:0000840;2.82e-15;5!CL:0000860;5.48e-14;33!CL:0002057;5.48e-14;33!CL:0002619;3.81e-12;3!CL:0000576;1.41e-11;48!CL:0000990;4.57e-10;8!CL:0000766;1.80e-08;69!CL:0001014;3.26e-08;2!CL:0001016;3.26e-08;2!CL:0000451;3.61e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,8.98e-37,61;CL:0000557,6.86e-33,67;CL:0002194,2.36e-32,59;CL:0000576,2.36e-32,59;CL:0000040,2.36e-32,59;CL:0000559,2.36e-32,59;CL:0000839,2.84e-28,66;CL:0000766,2.11e-25,72;CL:0000473,4.55e-23,48;CL:0000234,4.55e-23,48;CL:0000235,9.12e-23,6;CL:0000763,7.52e-18,108;CL:0000049,7.52e-18,108;CL:0002031,1.03e-16,120;CL:0000840,2.79e-15,5;CL:0001029,2.79e-15,5;CL:0002087,7.70e-15,115;CL:0000738,6.17e-14,136;CL:0002619,3.75e-12,3;CL:0000860,1.05e-11,42;CL:0002057,1.05e-11,42;CL:0002032,1.01e-10,161;CL:0000837,1.01e-10,161;CL:0000990,4.53e-10,8;CL:0000037,5.32e-10,168;CL:0000988,3.70e-09,177;CL:0001014,3.21e-08,2;CL:0001016,3.21e-08,2;CL:0000451,3.59e-08,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.45e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.82e-28!80;UBERON:0002390!2.96e-26!102;UBERON:0003061!2.96e-26!102;UBERON:0001474!5.53e-26!86;UBERON:0002193!1.22e-24!112;UBERON:0007023!3.05e-24!115;UBERON:0002405!1.72e-22!115;UBERON:0004765!1.33e-19!101;UBERON:0001434!1.33e-19!101;UBERON:0002204!4.28e-11!167;UBERON:0003081!1.63e-10!216;UBERON:0000062!4.93e-10!511;UBERON:0000467!5.82e-09!625;UBERON:0000480!6.95e-09!626;UBERON:0000468!3.24e-08!659;UBERON:0000923!7.84e-08!604;UBERON:0005291!7.84e-08!604;UBERON:0006598!7.84e-08!604;UBERON:0002532!7.84e-08!604;UBERON:0002050!9.27e-08!605;UBERON:0005423!9.27e-08!605;UBERON:0000922!1.24e-07!612;UBERON:0002420!1.87e-07!9;UBERON:0007245!1.87e-07!9;UBERON:0010009!1.87e-07!9;UBERON:0010011!1.87e-07!9;UBERON:0000454!1.87e-07!9;UBERON:0000479!3.84e-07!787;UBERON:0002308!5.14e-07!9;UBERON:0000125!5.14e-07!9 | |ontology_enrichment_uberon=UBERON:0002371!7.82e-28!80;UBERON:0002390!2.96e-26!102;UBERON:0003061!2.96e-26!102;UBERON:0001474!5.53e-26!86;UBERON:0002193!1.22e-24!112;UBERON:0007023!3.05e-24!115;UBERON:0002405!1.72e-22!115;UBERON:0004765!1.33e-19!101;UBERON:0001434!1.33e-19!101;UBERON:0002204!4.28e-11!167;UBERON:0003081!1.63e-10!216;UBERON:0000062!4.93e-10!511;UBERON:0000467!5.82e-09!625;UBERON:0000480!6.95e-09!626;UBERON:0000468!3.24e-08!659;UBERON:0000923!7.84e-08!604;UBERON:0005291!7.84e-08!604;UBERON:0006598!7.84e-08!604;UBERON:0002532!7.84e-08!604;UBERON:0002050!9.27e-08!605;UBERON:0005423!9.27e-08!605;UBERON:0000922!1.24e-07!612;UBERON:0002420!1.87e-07!9;UBERON:0007245!1.87e-07!9;UBERON:0010009!1.87e-07!9;UBERON:0010011!1.87e-07!9;UBERON:0000454!1.87e-07!9;UBERON:0000479!3.84e-07!787;UBERON:0002308!5.14e-07!9;UBERON:0000125!5.14e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0004177;3.65e-11;5!UBERON:0005057;3.65e-11;5!UBERON:0002370;1.55e-07;2!UBERON:0005058;1.55e-07;2!UBERON:0009113;1.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,3.78e-34,93;UBERON:0002193,2.81e-28,108;UBERON:0002371,3.33e-28,76;UBERON:0002390,8.44e-28,98;UBERON:0003061,8.44e-28,98;UBERON:0001474,1.20e-25,82;UBERON:0004765,9.07e-23,90;UBERON:0001434,8.12e-20,100;UBERON:0003081,3.66e-13,203;UBERON:0002204,4.21e-10,167;UBERON:0000926,1.01e-08,315;UBERON:0004120,1.01e-08,315;UBERON:0006603,1.01e-08,315;UBERON:0004177,5.04e-08,7;UBERON:0005057,5.04e-08,7 | |||
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| ||
|short_description=p3@SLAMF8 | |short_description=p3@SLAMF8 | ||
}} | }} |
Latest revision as of 23:34, 17 September 2015
Short description: | p3@SLAMF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLAMF8_5end |
Coexpression cluster: | C1153_Monocytederived_CD14_Dendritic_Macrophage_acute_spleen_lymph |
Association with transcript: | 19bp_to_ENST00000368104_5end |
EntrezGene: | SLAMF8 |
HGNC: | 21391 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immune system | 3.78e-34 | 93 |
hemolymphoid system | 2.81e-28 | 108 |
bone marrow | 3.33e-28 | 76 |
hematopoietic system | 8.44e-28 | 98 |
blood island | 8.44e-28 | 98 |
bone element | 1.20e-25 | 82 |
skeletal element | 9.07e-23 | 90 |
skeletal system | 8.12e-20 | 100 |
lateral plate mesoderm | 3.66e-13 | 203 |
musculoskeletal system | 4.21e-10 | 167 |
mesoderm | 1.01e-08 | 315 |
mesoderm-derived structure | 1.01e-08 | 315 |
presumptive mesoderm | 1.01e-08 | 315 |
hemopoietic organ | 5.04e-08 | 7 |
immune organ | 5.04e-08 | 7 |