FFCP PHASE1:Hg19::chr2:64751475..64751556,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54812 | |EntrezGene=54812 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25951 | |HGNC=25951 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ULP2 | |UniProt=Q6ULP2 | ||
|association_with_transcript=10bp_to_ENST00000238855,ENST00000238856,ENST00000422803,uc002scz.2,uc002sda.2,uc002sdb.2_5end | |association_with_transcript=10bp_to_ENST00000238855,ENST00000238856,ENST00000422803,uc002scz.2,uc002sda.2,uc002sdb.2_5end | ||
|cluster_id=chr2:64751475..64751556,+ | |||
|coexpression_cluster_id=C509 | |||
|description=CAGE_peak_1_at_AFTPH_5end | |description=CAGE_peak_1_at_AFTPH_5end | ||
|id=chr2:64751475..64751556,+ | |id=chr2:64751475..64751556,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.80e-41!140;CL:0002031!1.11e-33!124;CL:0000037!3.28e-33!172;CL:0000566!3.28e-33!172;CL:0002032!1.57e-31!165;CL:0000837!1.57e-31!165;CL:0002087!7.42e-31!119;CL:0000988!2.06e-28!182;CL:0000766!2.57e-23!76;CL:0000557!3.76e-21!71;CL:0002057!1.86e-19!42;CL:0000839!3.64e-19!70;CL:0000860!7.06e-19!45;CL:0002009!2.26e-18!65;CL:0000763!6.48e-18!112;CL:0000049!6.48e-18!112;CL:0002194!3.32e-17!63;CL:0000576!3.32e-17!63;CL:0000040!3.32e-17!63;CL:0000559!3.32e-17!63;CL:0000542!5.82e-13!53;CL:0000051!5.82e-13!53;CL:0000838!5.95e-13!52;CL:0000945!3.87e-10!24;CL:0000826!3.87e-10!24;CL:0000236!3.25e-07!14 | |ontology_enrichment_celltype=CL:0000738!3.80e-41!140;CL:0002031!1.11e-33!124;CL:0000037!3.28e-33!172;CL:0000566!3.28e-33!172;CL:0002032!1.57e-31!165;CL:0000837!1.57e-31!165;CL:0002087!7.42e-31!119;CL:0000988!2.06e-28!182;CL:0000766!2.57e-23!76;CL:0000557!3.76e-21!71;CL:0002057!1.86e-19!42;CL:0000839!3.64e-19!70;CL:0000860!7.06e-19!45;CL:0002009!2.26e-18!65;CL:0000763!6.48e-18!112;CL:0000049!6.48e-18!112;CL:0002194!3.32e-17!63;CL:0000576!3.32e-17!63;CL:0000040!3.32e-17!63;CL:0000559!3.32e-17!63;CL:0000542!5.82e-13!53;CL:0000051!5.82e-13!53;CL:0000838!5.95e-13!52;CL:0000945!3.87e-10!24;CL:0000826!3.87e-10!24;CL:0000236!3.25e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.91e-17;33!CL:0002057;2.91e-17;33!CL:0000473;1.98e-13;39!CL:0000234;1.98e-13;39!CL:0000576;5.37e-12;48!CL:0000766;4.36e-11;69!CL:0002087;1.46e-10;104!CL:0000945;4.70e-10;24!CL:0000738;3.26e-09;136!CL:0000542;5.78e-08;53!CL:0000236;7.82e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.13e-41,136;CL:0002031,3.66e-34,120;CL:0000037,2.32e-33,168;CL:0002032,1.10e-31,161;CL:0000837,1.10e-31,161;CL:0002087,2.62e-31,115;CL:0000988,3.79e-29,177;CL:0000766,7.70e-24,72;CL:0000557,1.19e-21,67;CL:0000839,1.35e-19,66;CL:0000860,1.68e-19,42;CL:0002057,1.68e-19,42;CL:0002009,7.87e-19,61;CL:0000473,1.39e-18,48;CL:0000234,1.39e-18,48;CL:0000763,5.76e-18,108;CL:0000049,5.76e-18,108;CL:0002194,1.23e-17,59;CL:0000576,1.23e-17,59;CL:0000040,1.23e-17,59;CL:0000559,1.23e-17,59;CL:0000542,4.51e-13,53;CL:0000051,4.51e-13,53;CL:0000838,4.60e-13,52;CL:0000945,3.69e-10,24;CL:0000826,3.69e-10,24;CL:0000236,3.15e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.51e-14;42!CL:0000051;5.78e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.34e-23!102;UBERON:0003061!6.34e-23!102;UBERON:0007023!3.13e-22!115;UBERON:0002193!1.13e-19!112;UBERON:0002371!1.96e-17!80;UBERON:0001474!4.89e-15!86;UBERON:0002405!3.34e-14!115;UBERON:0004765!6.54e-11!101;UBERON:0001434!6.54e-11!101;UBERON:0001049!4.93e-10!57;UBERON:0005068!4.93e-10!57;UBERON:0006241!4.93e-10!57;UBERON:0007135!4.93e-10!57;UBERON:0003080!3.85e-09!42;UBERON:0002780!5.04e-09!41;UBERON:0001890!5.04e-09!41;UBERON:0006240!5.04e-09!41;UBERON:0002616!2.11e-07!59;UBERON:0002020!4.89e-07!34;UBERON:0003528!4.89e-07!34;UBERON:0001893!9.41e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.83e-07;41!UBERON:0001890;5.83e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.94e-23,98;UBERON:0003061,1.94e-23,98;UBERON:0007023,8.89e-22,114;UBERON:0002193,3.48e-20,108;UBERON:0002371,6.22e-18,76;UBERON:0002405,6.38e-17,93;UBERON:0001474,2.12e-15,82;UBERON:0004765,1.87e-12,90;UBERON:0001434,3.11e-10,100;UBERON:0001049,5.60e-10,56;UBERON:0005068,5.60e-10,56;UBERON:0006241,5.60e-10,56;UBERON:0007135,5.60e-10,56;UBERON:0000073,2.17e-09,53;UBERON:0002616,2.17e-09,53;UBERON:0002780,4.83e-09,41;UBERON:0001890,4.83e-09,41;UBERON:0003080,4.83e-09,41;UBERON:0006240,4.83e-09,41;UBERON:0003528,4.75e-07,34;UBERON:0002020,4.75e-07,34;UBERON:0001893,9.15e-07,34 | |||
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| ||
|short_description=p1@AFTPH | |short_description=p1@AFTPH | ||
}} | }} |
Latest revision as of 23:44, 17 September 2015
Short description: | p1@AFTPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AFTPH_5end |
Coexpression cluster: | C509_Neutrophils_Eosinophils_CD14_Whole_CD34_CD19_Peripheral |
Association with transcript: | 10bp_to_ENST00000238855, ENST00000238856, ENST00000422803, uc002scz.2, uc002sda.2, uc002sdb.2_5end |
EntrezGene: | AFTPH |
HGNC: | 25951 |
UniProt: | Q6ULP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.13e-41 | 136 |
hematopoietic lineage restricted progenitor cell | 3.66e-34 | 120 |
hematopoietic stem cell | 2.32e-33 | 168 |
hematopoietic oligopotent progenitor cell | 1.10e-31 | 161 |
hematopoietic multipotent progenitor cell | 1.10e-31 | 161 |
nongranular leukocyte | 2.62e-31 | 115 |
hematopoietic cell | 3.79e-29 | 177 |
myeloid leukocyte | 7.70e-24 | 72 |
granulocyte monocyte progenitor cell | 1.19e-21 | 67 |
myeloid lineage restricted progenitor cell | 1.35e-19 | 66 |
classical monocyte | 1.68e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.68e-19 | 42 |
macrophage dendritic cell progenitor | 7.87e-19 | 61 |
defensive cell | 1.39e-18 | 48 |
phagocyte | 1.39e-18 | 48 |
myeloid cell | 5.76e-18 | 108 |
common myeloid progenitor | 5.76e-18 | 108 |
monopoietic cell | 1.23e-17 | 59 |
monocyte | 1.23e-17 | 59 |
monoblast | 1.23e-17 | 59 |
promonocyte | 1.23e-17 | 59 |
lymphocyte | 4.51e-13 | 53 |
common lymphoid progenitor | 4.51e-13 | 53 |
lymphoid lineage restricted progenitor cell | 4.60e-13 | 52 |
lymphocyte of B lineage | 3.69e-10 | 24 |
pro-B cell | 3.69e-10 | 24 |
B cell | 3.15e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.94e-23 | 98 |
blood island | 1.94e-23 | 98 |
adult organism | 8.89e-22 | 114 |
hemolymphoid system | 3.48e-20 | 108 |
bone marrow | 6.22e-18 | 76 |
immune system | 6.38e-17 | 93 |
bone element | 2.12e-15 | 82 |
skeletal element | 1.87e-12 | 90 |
skeletal system | 3.11e-10 | 100 |
neural tube | 5.60e-10 | 56 |
neural rod | 5.60e-10 | 56 |
future spinal cord | 5.60e-10 | 56 |
neural keel | 5.60e-10 | 56 |
regional part of nervous system | 2.17e-09 | 53 |
regional part of brain | 2.17e-09 | 53 |
regional part of forebrain | 4.83e-09 | 41 |
forebrain | 4.83e-09 | 41 |
anterior neural tube | 4.83e-09 | 41 |
future forebrain | 4.83e-09 | 41 |
brain grey matter | 4.75e-07 | 34 |
gray matter | 4.75e-07 | 34 |
telencephalon | 9.15e-07 | 34 |