FFCP PHASE1:Hg19::chr19:40194964..40194986,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56891 | |EntrezGene=56891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30054 | |HGNC=30054 | ||
|TSSclassifier=strong | |||
|UniProt=A8MPV8,Q8TCE9,B2R530 | |UniProt=A8MPV8,Q8TCE9,B2R530 | ||
|association_with_transcript=18bp_to_ENST00000360675,ENST00000392052,NM_020129,NM_203471,uc002omf.2,uc002omg.2_5end | |association_with_transcript=18bp_to_ENST00000360675,ENST00000392052,NM_020129,NM_203471,uc002omf.2,uc002omg.2_5end | ||
|cluster_id=chr19:40194964..40194986,+ | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_3_at_LGALS14_5end | |description=CAGE_peak_3_at_LGALS14_5end | ||
|id=chr19:40194964..40194986,+ | |id=chr19:40194964..40194986,+ | ||
|ontology_enrichment_celltype=CL:0002541!8.13e-23!3;CL:0000945!3.41e-10!24;CL:0000826!3.41e-10!24 | |ontology_enrichment_celltype=CL:0002541!8.13e-23!3;CL:0000945!3.41e-10!24;CL:0000826!3.41e-10!24 | ||
|ontology_enrichment_celltype_v019=CL:0002541;3.68e-59;3!CL:0000349;5.60e-10;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.07e-59,3;CL:0000349,5.69e-10,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.53e-21;1 | |||
|ontology_enrichment_disease=DOID:630!1.18e-08!1;DOID:0050177!1.18e-08!1;DOID:0050427!1.18e-08!1 | |ontology_enrichment_disease=DOID:630!1.18e-08!1;DOID:0050177!1.18e-08!1;DOID:0050427!1.18e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!8.13e-23!3;UBERON:0000920!8.13e-23!3;UBERON:0003124!2.90e-17!7;UBERON:0005631!1.06e-08!14;UBERON:0000158!1.06e-08!14;UBERON:0001882!4.07e-08!1;UBERON:0005403!4.07e-08!1 | |ontology_enrichment_uberon=UBERON:0000476!8.13e-23!3;UBERON:0000920!8.13e-23!3;UBERON:0003124!2.90e-17!7;UBERON:0005631!1.06e-08!14;UBERON:0000158!1.06e-08!14;UBERON:0001882!4.07e-08!1;UBERON:0005403!4.07e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.68e-59;3!UBERON:0000920;3.68e-59;3!UBERON:0005631;2.40e-18;10!UBERON:0000158;2.40e-18;10!UBERON:0000478;1.38e-13;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.07e-59,3;UBERON:0003124,2.50e-45,7;UBERON:0005631,5.90e-23,14;UBERON:0000158,5.90e-23,14;UBERON:0000478,1.40e-13,24 | |||
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|short_description=p3@LGALS14 | |short_description=p3@LGALS14 | ||
}} | }} |
Latest revision as of 00:13, 18 September 2015
Short description: | p3@LGALS14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LGALS14_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 18bp_to_ENST00000360675, ENST00000392052, NM_020129, NM_203471, uc002omf.2, uc002omg.2_5end |
EntrezGene: | LGALS14 |
HGNC: | 30054 |
UniProt: | A8MPV8Q8TCE9B2R530 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.07e-59 | 3 |
extraembryonic cell | 5.69e-10 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.07e-59 | 3 |
chorion | 2.50e-45 | 7 |
extraembryonic membrane | 5.90e-23 | 14 |
membranous layer | 5.90e-23 | 14 |
extraembryonic structure | 1.40e-13 | 24 |