FFCP PHASE1:Hg19::chr5:43290247..43290260,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3157 | |EntrezGene=3157 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5007 | |HGNC=5007 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-286bp_to_AL050004_5end | |association_with_transcript=-286bp_to_AL050004_5end | ||
|cluster_id=chr5:43290247..43290260,- | |||
|description=CAGE_peak_7_at_HMGCS1_5end | |description=CAGE_peak_7_at_HMGCS1_5end | ||
|id=chr5:43290247..43290260,- | |id=chr5:43290247..43290260,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.83e-13;3!CL:0000067;1.83e-13;3!CL:0005012;1.83e-13;3!CL:0002304;1.83e-13;3 | |ontology_enrichment_celltype_v019=CL:0000064;1.83e-13;3!CL:0000067;1.83e-13;3!CL:0005012;1.83e-13;3!CL:0002304;1.83e-13;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,6.06e-14,3;CL:0000067,6.06e-14,3;CL:0005012,6.06e-14,3;CL:0002304,6.06e-14,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!1.65e-12!239;DOID:162!2.56e-12!235;DOID:0050687!1.57e-07!143;DOID:305!1.77e-07!106;DOID:0050686!3.31e-07!137;DOID:2531!3.82e-07!51;DOID:0060083!3.82e-07!51 | |ontology_enrichment_disease=DOID:14566!1.65e-12!239;DOID:162!2.56e-12!235;DOID:0050687!1.57e-07!143;DOID:305!1.77e-07!106;DOID:0050686!3.31e-07!137;DOID:2531!3.82e-07!51;DOID:0060083!3.82e-07!51 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.83e-13;3!UBERON:0001775;1.83e-13;3!UBERON:0000488;3.25e-10;4!UBERON:0007625;9.32e-10;11!UBERON:0006876;2.10e-09;11!UBERON:0002203;6.04e-07;6!UBERON:0001768;6.04e-07;6!UBERON:0002200;6.04e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0001778;1.83e-13;3!UBERON:0001775;1.83e-13;3!UBERON:0000488;3.25e-10;4!UBERON:0007625;9.32e-10;11!UBERON:0006876;2.10e-09;11!UBERON:0002203;6.04e-07;6!UBERON:0001768;6.04e-07;6!UBERON:0002200;6.04e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,6.06e-14,3;UBERON:0001775,6.06e-14,3;UBERON:0000488,1.43e-10,4;UBERON:0007625,6.11e-10,11;UBERON:0006876,1.52e-09,11;UBERON:0002203,3.54e-07,6;UBERON:0001768,3.54e-07,6;UBERON:0002200,3.54e-07,6 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,1.11389717664042,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0.572471974262113,0.410623275218653,4.01736446703369,0.0764134057479513,0.246301768349837,0.157421562627358,0,0.383829398097213,0,0.919421224478927,0,0,0.309868802321207,0.710846162437108,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0,0.306083892370903,0,1.27867425159808,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0,0,0,0.632924774881769,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,2.43806866313962,0,0.12786256184353,0,0,0,0,0,1.51255707462509,1.99556457716308,2.3715392137144,0.0654895377488563,0.364295288292542,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.337834441449967,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,0,0,0,0,0,0,0,0.653847612453835,0,0,0,0,0,1.04614076386261,0.469737994575059,0.809364721840658,0.702254033511242,0,1.10550885580591,0.206651562351531,0,0,0,0,0.505008341862199,0.250237039743928,0.277064115484183,0,0,0.150238058906597,0.226864366320042,0,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0.57978255948989,0.545492241181669,0.286804595389004,0.609868530647977,0,0.580969714347592,0.10366105501537,0.756962552626885,0.72995471815166,0,0,0,0,2.16563844500876,0.709840800239063,0.168584690078102,0.482022059766964,0.220587945464788,0.217879444092406,0.71181185733329,0.134831308160164,0.588664395376038,0.769494313892781,0,0,0,0,7.60530208930985,0.982827216677626,2.36315962672562,0.882926198829301,0.491953754172454,0.343135620597051,0.548751427043128,0,4.82539067575828,1.20364978706088,0,0,0,0.231860809950154,0,0.144366447761074,0.925971025153221,0.380508304469197,0,0,0.246217006087397,0,0.743155811443641,0,0.16798212819886,0.567100388969546,0.0895585227028483,0.581267877027924,0.383382679165211,0,0.088048434013226,0.207328115540772,0,0,0.380987365753014,0,0,0,0.308482478109971,0.300343057843917,1.42913216315289,0,0,0.1466765716419,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.599837947092342,0,0,0,0,0,0,0,0.205476322550383,0,0.336255431980582,0,0,0.513372145118994,0,0,0.773288812777695,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.695068915744663,0,0,0,0.431428401637234,0,0,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0.116210378459959,1.32945394550784,0.601519410909855,0.368323955743585,0.114814448164607,0.182091168006717,0.393373244878272,0.451199612907412,0.770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,2.3080511260475,0,0,0.206082023295445,0.54941678891006,0.165018999841176,0.574265537996172,0,0,0,0.616194468458578,0.767518373630648,0.137836572484531,1.18162269355101,0.725083469571143,0.767039646744908,0.178064071293475,0,0,0.765676274967505,0,0,0,0,0,0,0,0,0,1.116475108079,0,1.14378116354295,0,0.42793898803392,0,0,0.539617372749944,0.54907405947211,1.06031162111118,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,1.00387946542836,0.392996164052485,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0,0.427296284509893,0,0.735120647943095,1.85803175125719,0.28853842595289,0.142283686696828,0.637705090915289,0.199579371432817,0,0.635020748171649,0.649243880549111,0.842391534340376,0,0.47003968731907,0,0.169291777801603,0.321176150207399,0.403599414382095,0.851692475380653,0.343505344755765,0,0,0,0.390776190804081,0.278406173895242,1.23087398947712,0.270455678475983,0.33307196799782,1.4098700508785,0.37428108081644,0,0.242721043499027,0.111443384277478,0,0,0,0,0.994147647766298,0.703347082052564,0,0.494411622680279,0,0.19924798825107,0,0.755798243562828,0,0.246169610922139,0,0,0.895105873378046,0,0,0,0,0,0.0927680981618513,1.99613798001194,0.520855522170466,0.349839999984783,0,0.1137934482855,0,1.18193840883968,2.75794698593172,0.583209226766509,0.520874984799877,0,0,0,0.221158519862449,0.591095237907095,0.219385397153973,0,0.139423744278603,0.0769502585037971,0.113942055847001,0.23056390438806,0,0.217294743844016,0,0,0,0,0.156980256395025,0.664846727600626,1.1279783030859,1.56850027454192,0.167821586975843,0.37950746544837,0,1.47698645169619,0.326465616318295,0.282706142867882,0,0,0.176915129006678,0,0.593042257361244,0.86494757262552,0.313265848516366,0,0,0.234264445725339,1.64209310294099,0,0.242780379534093,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0.284609546029793,0.138674673013139,1.04135843001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| ||
|short_description=p7@HMGCS1 | |short_description=p7@HMGCS1 | ||
}} | }} |
Latest revision as of 00:27, 18 September 2015
Short description: | p7@HMGCS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HMGCS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -286bp_to_AL050004_5end |
EntrezGene: | HMGCS1 |
HGNC: | 5007 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 6.06e-14 | 3 |
ciliated epithelial cell | 6.06e-14 | 3 |
multi-ciliated epithelial cell | 6.06e-14 | 3 |
non-pigmented ciliary epithelial cell | 6.06e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 6.06e-14 | 3 |
ciliary body | 6.06e-14 | 3 |
atypical epithelium | 1.43e-10 | 4 |
pigment epithelium of eye | 6.11e-10 | 11 |
vasculature of organ | 1.52e-09 | 11 |
vasculature of eye | 3.54e-07 | 6 |
uvea | 3.54e-07 | 6 |
vasculature of head | 3.54e-07 | 6 |