FFCP PHASE1:Hg19::chr4:55523948..55523989,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3815 | |EntrezGene=3815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6342 | |HGNC=6342 | ||
|TSSclassifier=strong | |||
|UniProt=P10721 | |UniProt=P10721 | ||
|association_with_transcript=-95bp_to_ENST00000288135,ENST00000412167_5end | |association_with_transcript=-95bp_to_ENST00000288135,ENST00000412167_5end | ||
|cluster_id=chr4:55523948..55523989,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_3_at_KIT_5end | |description=CAGE_peak_3_at_KIT_5end | ||
|id=chr4:55523948..55523989,+ | |id=chr4:55523948..55523989,+ | ||
|ontology_enrichment_celltype=CL:0002274!6.33e-13!5;CL:0000457!6.33e-13!5;CL:0002191!6.33e-13!5;CL:0000097!6.33e-13!5;CL:0000831!6.33e-13!5;CL:0002028!6.33e-13!5;CL:0000163!6.75e-07!9 | |ontology_enrichment_celltype=CL:0002274!6.33e-13!5;CL:0000457!6.33e-13!5;CL:0002191!6.33e-13!5;CL:0000097!6.33e-13!5;CL:0000831!6.33e-13!5;CL:0002028!6.33e-13!5;CL:0000163!6.75e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.44e-195;5!CL:0000163;4.60e-109;9!CL:0000151;1.65e-25;36!CL:0000766;2.35e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.45e-195,5;CL:0002028,2.45e-195,5;CL:0000163,4.60e-109,9;CL:0000151,5.37e-28,36;CL:0000839,2.11e-15,66;CL:0000557,3.48e-15,67;CL:0000766,3.42e-14,72;CL:0000763,1.03e-09,108;CL:0000049,1.03e-09,108;CL:0002031,8.28e-09,120;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.84e-18!115;UBERON:0005743!1.32e-13!86;UBERON:0001049!4.53e-13!57;UBERON:0005068!4.53e-13!57;UBERON:0006241!4.53e-13!57;UBERON:0007135!4.53e-13!57;UBERON:0000073!1.43e-12!94;UBERON:0001016!1.43e-12!94;UBERON:0002616!1.95e-12!59;UBERON:0001017!3.29e-12!82;UBERON:0000955!8.15e-12!69;UBERON:0006238!8.15e-12!69;UBERON:0002020!9.50e-12!34;UBERON:0003528!9.50e-12!34;UBERON:0002346!1.27e-11!90;UBERON:0001869!3.97e-11!32;UBERON:0002619!5.20e-11!22;UBERON:0003075!2.79e-10!86;UBERON:0007284!2.79e-10!86;UBERON:0001893!2.83e-10!34;UBERON:0000956!2.08e-09!25;UBERON:0000203!2.08e-09!25;UBERON:0000033!2.53e-09!123;UBERON:0000153!2.66e-09!129;UBERON:0007811!2.66e-09!129;UBERON:0002791!2.94e-09!33;UBERON:0002780!3.35e-09!41;UBERON:0001890!3.35e-09!41;UBERON:0006240!3.35e-09!41;UBERON:0003080!6.78e-09!42;UBERON:0000924!2.18e-08!173;UBERON:0006601!2.18e-08!173;UBERON:0001950!2.26e-08!20;UBERON:0003056!1.19e-07!61;UBERON:0004121!2.00e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!7.84e-18!115;UBERON:0005743!1.32e-13!86;UBERON:0001049!4.53e-13!57;UBERON:0005068!4.53e-13!57;UBERON:0006241!4.53e-13!57;UBERON:0007135!4.53e-13!57;UBERON:0000073!1.43e-12!94;UBERON:0001016!1.43e-12!94;UBERON:0002616!1.95e-12!59;UBERON:0001017!3.29e-12!82;UBERON:0000955!8.15e-12!69;UBERON:0006238!8.15e-12!69;UBERON:0002020!9.50e-12!34;UBERON:0003528!9.50e-12!34;UBERON:0002346!1.27e-11!90;UBERON:0001869!3.97e-11!32;UBERON:0002619!5.20e-11!22;UBERON:0003075!2.79e-10!86;UBERON:0007284!2.79e-10!86;UBERON:0001893!2.83e-10!34;UBERON:0000956!2.08e-09!25;UBERON:0000203!2.08e-09!25;UBERON:0000033!2.53e-09!123;UBERON:0000153!2.66e-09!129;UBERON:0007811!2.66e-09!129;UBERON:0002791!2.94e-09!33;UBERON:0002780!3.35e-09!41;UBERON:0001890!3.35e-09!41;UBERON:0006240!3.35e-09!41;UBERON:0003080!6.78e-09!42;UBERON:0000924!2.18e-08!173;UBERON:0006601!2.18e-08!173;UBERON:0001950!2.26e-08!20;UBERON:0003056!1.19e-07!61;UBERON:0004121!2.00e-07!169 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-13,76;UBERON:0001474,1.45e-12,82;UBERON:0004765,1.62e-11,90;UBERON:0002405,3.61e-11,93;UBERON:0002390,1.23e-10,98;UBERON:0003061,1.23e-10,98;UBERON:0001434,1.95e-10,100;UBERON:0002193,1.03e-09,108 | |||
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| ||
|short_description=p3@KIT | |short_description=p3@KIT | ||
}} | }} |
Latest revision as of 01:08, 18 September 2015
Short description: | p3@KIT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KIT_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -95bp_to_ENST00000288135, ENST00000412167_5end |
EntrezGene: | KIT |
HGNC: | 6342 |
UniProt: | P10721 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.45e-195 | 5 |
basophil mast progenitor cell | 2.45e-195 | 5 |
endocrine cell | 4.60e-109 | 9 |
secretory cell | 5.37e-28 | 36 |
myeloid lineage restricted progenitor cell | 2.11e-15 | 66 |
granulocyte monocyte progenitor cell | 3.48e-15 | 67 |
myeloid leukocyte | 3.42e-14 | 72 |
myeloid cell | 1.03e-09 | 108 |
common myeloid progenitor | 1.03e-09 | 108 |
hematopoietic lineage restricted progenitor cell | 8.28e-09 | 120 |
leukocyte | 7.64e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.72e-13 | 76 |
bone element | 1.45e-12 | 82 |
skeletal element | 1.62e-11 | 90 |
immune system | 3.61e-11 | 93 |
hematopoietic system | 1.23e-10 | 98 |
blood island | 1.23e-10 | 98 |
skeletal system | 1.95e-10 | 100 |
hemolymphoid system | 1.03e-09 | 108 |