FFCP PHASE1:Hg19::chr17:7750438..7750461,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23135 | |EntrezGene=23135 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29012 | |HGNC=29012 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-402bp_to_uc002gix.2_5end | |association_with_transcript=-402bp_to_uc002gix.2_5end | ||
|cluster_id=chr17:7750438..7750461,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_15_at_KDM6B_5end | |description=CAGE_peak_15_at_KDM6B_5end | ||
|id=chr17:7750438..7750461,+ | |id=chr17:7750438..7750461,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.75e-32!42;CL:0000860!7.18e-29!45;CL:0000738!8.55e-22!140;CL:0000557!9.25e-22!71;CL:0002009!7.56e-21!65;CL:0000766!1.65e-20!76;CL:0000839!2.04e-19!70;CL:0002087!3.04e-19!119;CL:0002194!5.74e-19!63;CL:0000576!5.74e-19!63;CL:0000040!5.74e-19!63;CL:0000559!5.74e-19!63;CL:0002031!6.76e-19!124;CL:0000037!1.25e-14!172;CL:0000566!1.25e-14!172;CL:0000988!6.15e-14!182;CL:0002032!9.01e-14!165;CL:0000837!9.01e-14!165;CL:0000763!1.43e-12!112;CL:0000049!1.43e-12!112 | |ontology_enrichment_celltype=CL:0002057!6.75e-32!42;CL:0000860!7.18e-29!45;CL:0000738!8.55e-22!140;CL:0000557!9.25e-22!71;CL:0002009!7.56e-21!65;CL:0000766!1.65e-20!76;CL:0000839!2.04e-19!70;CL:0002087!3.04e-19!119;CL:0002194!5.74e-19!63;CL:0000576!5.74e-19!63;CL:0000040!5.74e-19!63;CL:0000559!5.74e-19!63;CL:0002031!6.76e-19!124;CL:0000037!1.25e-14!172;CL:0000566!1.25e-14!172;CL:0000988!6.15e-14!182;CL:0002032!9.01e-14!165;CL:0000837!9.01e-14!165;CL:0000763!1.43e-12!112;CL:0000049!1.43e-12!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.32e-93;33!CL:0002057;2.32e-93;33!CL:0000473;3.09e-64;39!CL:0000234;3.09e-64;39!CL:0000576;1.11e-40;48!CL:0000766;1.82e-31;69!CL:0000763;3.73e-14;100!CL:0002087;7.74e-14;104!CL:0000738;4.44e-11;136!CL:0000775;1.24e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.49e-78,42;CL:0002057,1.49e-78,42;CL:0000473,2.94e-68,48;CL:0000234,2.94e-68,48;CL:0000766,2.88e-57,72;CL:0002009,4.73e-57,61;CL:0000557,1.11e-56,67;CL:0002194,7.73e-54,59;CL:0000576,7.73e-54,59;CL:0000040,7.73e-54,59;CL:0000559,7.73e-54,59;CL:0000839,1.16e-52,66;CL:0000763,2.80e-40,108;CL:0000049,2.80e-40,108;CL:0000738,7.52e-34,136;CL:0002031,8.10e-33,120;CL:0002087,1.49e-28,115;CL:0002032,5.87e-28,161;CL:0000837,5.87e-28,161;CL:0000037,1.28e-26,168;CL:0000988,4.73e-25,177;CL:0000775,1.55e-10,3;CL:0000134,2.67e-10,354;CL:0002320,5.21e-10,361;CL:0000219,5.48e-09,386;CL:0000048,1.23e-08,427;CL:0000723,1.89e-08,433;CL:0000034,3.28e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.34e-59;42!CL:0000049;1.92e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.02e-17!80;UBERON:0001474!1.75e-17!86;UBERON:0002390!1.36e-16!102;UBERON:0003061!1.36e-16!102;UBERON:0002193!2.04e-14!112;UBERON:0004765!1.43e-13!101;UBERON:0001434!1.43e-13!101;UBERON:0002405!3.37e-11!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.40e-49,76;UBERON:0001474,1.06e-45,82;UBERON:0004765,2.52e-41,90;UBERON:0002405,7.11e-40,93;UBERON:0002390,1.18e-37,98;UBERON:0003061,1.18e-37,98;UBERON:0001434,7.96e-37,100;UBERON:0002193,8.09e-34,108;UBERON:0002204,1.95e-22,167;UBERON:0003081,1.04e-17,203;UBERON:0000926,7.55e-10,315;UBERON:0004120,7.55e-10,315;UBERON:0006603,7.55e-10,315;UBERON:0002384,1.30e-09,371 | |||
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|short_description=p15@KDM6B | |short_description=p15@KDM6B | ||
}} | }} |
Latest revision as of 01:43, 18 September 2015
Short description: | p15@KDM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_KDM6B_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -402bp_to_uc002gix.2_5end |
EntrezGene: | KDM6B |
HGNC: | 29012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.49e-78 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.49e-78 | 42 |
defensive cell | 2.94e-68 | 48 |
phagocyte | 2.94e-68 | 48 |
myeloid leukocyte | 2.88e-57 | 72 |
macrophage dendritic cell progenitor | 4.73e-57 | 61 |
granulocyte monocyte progenitor cell | 1.11e-56 | 67 |
monopoietic cell | 7.73e-54 | 59 |
monocyte | 7.73e-54 | 59 |
monoblast | 7.73e-54 | 59 |
promonocyte | 7.73e-54 | 59 |
myeloid lineage restricted progenitor cell | 1.16e-52 | 66 |
myeloid cell | 2.80e-40 | 108 |
common myeloid progenitor | 2.80e-40 | 108 |
leukocyte | 7.52e-34 | 136 |
hematopoietic lineage restricted progenitor cell | 8.10e-33 | 120 |
nongranular leukocyte | 1.49e-28 | 115 |
hematopoietic oligopotent progenitor cell | 5.87e-28 | 161 |
hematopoietic multipotent progenitor cell | 5.87e-28 | 161 |
hematopoietic stem cell | 1.28e-26 | 168 |
hematopoietic cell | 4.73e-25 | 177 |
neutrophil | 1.55e-10 | 3 |
mesenchymal cell | 2.67e-10 | 354 |
connective tissue cell | 5.21e-10 | 361 |
motile cell | 5.48e-09 | 386 |
multi fate stem cell | 1.23e-08 | 427 |
somatic stem cell | 1.89e-08 | 433 |
stem cell | 3.28e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.40e-49 | 76 |
bone element | 1.06e-45 | 82 |
skeletal element | 2.52e-41 | 90 |
immune system | 7.11e-40 | 93 |
hematopoietic system | 1.18e-37 | 98 |
blood island | 1.18e-37 | 98 |
skeletal system | 7.96e-37 | 100 |
hemolymphoid system | 8.09e-34 | 108 |
musculoskeletal system | 1.95e-22 | 167 |
lateral plate mesoderm | 1.04e-17 | 203 |
mesoderm | 7.55e-10 | 315 |
mesoderm-derived structure | 7.55e-10 | 315 |
presumptive mesoderm | 7.55e-10 | 315 |
connective tissue | 1.30e-09 | 371 |