FFCP PHASE1:Hg19::chr2:171572786..171572840,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:171572786..171572840,+
|short_description=p2@SP5
|description=CAGE_peak_2_at_SP5_5end
|association_with_transcript=63bp_to_BC069026_5end
|EntrezGene=38905...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=389058 | |EntrezGene=389058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=14529 | |HGNC=14529 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=63bp_to_BC069026_5end | |||
|cluster_id=chr2:171572786..171572840,+ | |||
|coexpression_cluster_id=C258 | |||
|description=CAGE_peak_2_at_SP5_5end | |||
|id=chr2:171572786..171572840,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.94e-12!5;CL:0000047!9.60e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.56e-32;5!CL:0000047;1.64e-13;2!CL:0002321;1.12e-10;15!CL:0000182;2.31e-09;12!CL:0002563;1.40e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.79e-32,5;CL:0000182,2.31e-09,12;CL:0000047,8.83e-08,8;CL:0002563,1.31e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.30e-10;11!UBERON:0009497;1.20e-08;13!UBERON:0000358;7.45e-08;1!UBERON:0001041;1.46e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;4.35e-08;1!DOID:1357;4.35e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,4.35e-08,1;DOID:1357,4.35e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003135!2.97e-14!11;UBERON:0000473!1.79e-12!8;UBERON:0003101!3.22e-11!22;UBERON:0000079!3.22e-11!22;UBERON:0007023!2.89e-07!115;UBERON:0006947!8.37e-07!3;UBERON:0004054!8.37e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;6.00e-14;49!UBERON:0001764;4.35e-08;1!UBERON:0001825;4.35e-08;1!UBERON:0002372;1.35e-07;1!UBERON:0001961;1.35e-07;1!UBERON:0001744;1.35e-07;1!UBERON:0001042;1.35e-07;1!UBERON:0001735;1.35e-07;1!UBERON:0001242;1.40e-07;4!UBERON:0001262;1.40e-07;4!UBERON:0004786;1.40e-07;4!UBERON:0004808;1.40e-07;4!UBERON:0001277;1.40e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,4.35e-08,1;UBERON:0001825,4.35e-08,1;UBERON:0001242,1.31e-07,4;UBERON:0001262,1.31e-07,4;UBERON:0004786,1.31e-07,4;UBERON:0004808,1.31e-07,4;UBERON:0001277,1.31e-07,4;UBERON:0002372,1.54e-07,1;UBERON:0001961,1.54e-07,1;UBERON:0001744,1.54e-07,1;UBERON:0001735,1.54e-07,1 | |||
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| ||
|short_description=p2@SP5 | |||
}} | }} |
Latest revision as of 03:23, 18 September 2015
Short description: | p2@SP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SP5_5end |
Coexpression cluster: | C258_hepatoblastoma_hepatocellular_signet_colon_Intestinal_Prostate_gastric |
Association with transcript: | 63bp_to_BC069026_5end |
EntrezGene: | SP5 |
HGNC: | 14529 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.79e-32 | 5 |
hepatocyte | 2.31e-09 | 12 |
neuronal stem cell | 8.83e-08 | 8 |
intestinal epithelial cell | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 4.35e-08 | 1 |
paranasal sinus | 4.35e-08 | 1 |
intestinal mucosa | 1.31e-07 | 4 |
wall of intestine | 1.31e-07 | 4 |
gastrointestinal system mucosa | 1.31e-07 | 4 |
gastrointestinal system epithelium | 1.31e-07 | 4 |
intestinal epithelium | 1.31e-07 | 4 |
tonsil | 1.54e-07 | 1 |
mucosa-associated lymphoid tissue | 1.54e-07 | 1 |
lymphoid tissue | 1.54e-07 | 1 |
tonsillar ring | 1.54e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 4.35e-08 | 1 |
maxillary sinus cancer | 4.35e-08 | 1 |