FFCP PHASE1:Hg19::chr2:172017393..172017509,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9874 | |EntrezGene=9874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11841 | |HGNC=11841 | ||
|TSSclassifier=strong | |||
|UniProt=B3KRP1,B3KR15,Q9UKI8 | |UniProt=B3KRP1,B3KR15,Q9UKI8 | ||
|association_with_transcript=0bp_to_ENST00000409443,ENST00000442919,NM_012290,uc002ugn.2,uc002ugo.2,uc002ugq.2_5end | |association_with_transcript=0bp_to_ENST00000409443,ENST00000442919,NM_012290,uc002ugn.2,uc002ugo.2,uc002ugq.2_5end | ||
|cluster_id=chr2:172017393..172017509,- | |||
|description=CAGE_peak_2_at_TLK1_5end | |description=CAGE_peak_2_at_TLK1_5end | ||
|id=chr2:172017393..172017509,- | |id=chr2:172017393..172017509,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.10e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.52e-29!115;UBERON:0001017!4.76e-17!82;UBERON:0000073!6.03e-17!94;UBERON:0001016!6.03e-17!94;UBERON:0005743!2.23e-16!86;UBERON:0001049!1.02e-15!57;UBERON:0005068!1.02e-15!57;UBERON:0006241!1.02e-15!57;UBERON:0007135!1.02e-15!57;UBERON:0003080!1.26e-15!42;UBERON:0002780!1.54e-15!41;UBERON:0001890!1.54e-15!41;UBERON:0006240!1.54e-15!41;UBERON:0000955!7.63e-15!69;UBERON:0006238!7.63e-15!69;UBERON:0001869!1.30e-13!32;UBERON:0001893!3.16e-13!34;UBERON:0002616!5.25e-13!59;UBERON:0002020!5.41e-13!34;UBERON:0003528!5.41e-13!34;UBERON:0002791!1.06e-12!33;UBERON:0002619!1.50e-12!22;UBERON:0001950!1.96e-11!20;UBERON:0000956!4.35e-11!25;UBERON:0000203!4.35e-11!25;UBERON:0002346!3.84e-10!90;UBERON:0000153!7.39e-10!129;UBERON:0007811!7.39e-10!129;UBERON:0003075!2.14e-09!86;UBERON:0007284!2.14e-09!86;UBERON:0000033!6.31e-09!123;UBERON:0003056!8.92e-09!61;UBERON:0000924!3.25e-08!173;UBERON:0006601!3.25e-08!173;UBERON:0004121!1.31e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.73e-12;22!UBERON:0001869;2.63e-12;32!UBERON:0001893;8.82e-12;34!UBERON:0002791;1.24e-11;32!UBERON:0003528;1.49e-11;34!UBERON:0002020;1.49e-11;34!UBERON:0002780;2.22e-11;41!UBERON:0001890;2.22e-11;41!UBERON:0001950;2.23e-11;20!UBERON:0000956;4.60e-11;25!UBERON:0000203;4.60e-11;25!UBERON:0000073;3.48e-09;53!UBERON:0002616;3.48e-09;53!UBERON:0007023;2.55e-08;114!UBERON:0001017;4.23e-08;75!UBERON:0000955;8.74e-08;68!UBERON:0001016;1.36e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.11e-28,114;UBERON:0001016,2.00e-17,89;UBERON:0001017,6.56e-17,81;UBERON:0001049,1.34e-15,56;UBERON:0005068,1.34e-15,56;UBERON:0006241,1.34e-15,56;UBERON:0007135,1.34e-15,56;UBERON:0002780,1.54e-15,41;UBERON:0001890,1.54e-15,41;UBERON:0003080,1.54e-15,41;UBERON:0006240,1.54e-15,41;UBERON:0000073,2.54e-15,53;UBERON:0002616,2.54e-15,53;UBERON:0000955,1.04e-14,68;UBERON:0006238,1.04e-14,68;UBERON:0001869,1.30e-13,32;UBERON:0001893,3.16e-13,34;UBERON:0003528,5.41e-13,34;UBERON:0002020,5.41e-13,34;UBERON:0002791,1.18e-12,32;UBERON:0002619,1.50e-12,22;UBERON:0001950,1.96e-11,20;UBERON:0000956,4.35e-11,25;UBERON:0000203,4.35e-11,25;UBERON:0011216,2.78e-10,223;UBERON:0002346,3.51e-09,86;UBERON:0003056,4.43e-09,61;UBERON:0003075,1.87e-08,82;UBERON:0007284,1.87e-08,82;UBERON:0004121,2.62e-07,171;UBERON:0000924,2.62e-07,171;UBERON:0006601,2.62e-07,171 | |||
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| ||
|short_description=p2@TLK1 | |short_description=p2@TLK1 | ||
}} | }} |
Latest revision as of 04:05, 18 September 2015
Short description: | p2@TLK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TLK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000409443, ENST00000442919, NM_012290, uc002ugn.2, uc002ugo.2, uc002ugq.2_5end |
EntrezGene: | TLK1 |
HGNC: | 11841 |
UniProt: | B3KRP1B3KR15Q9UKI8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.11e-28 | 114 |
nervous system | 2.00e-17 | 89 |
central nervous system | 6.56e-17 | 81 |
neural tube | 1.34e-15 | 56 |
neural rod | 1.34e-15 | 56 |
future spinal cord | 1.34e-15 | 56 |
neural keel | 1.34e-15 | 56 |
regional part of forebrain | 1.54e-15 | 41 |
forebrain | 1.54e-15 | 41 |
anterior neural tube | 1.54e-15 | 41 |
future forebrain | 1.54e-15 | 41 |
regional part of nervous system | 2.54e-15 | 53 |
regional part of brain | 2.54e-15 | 53 |
brain | 1.04e-14 | 68 |
future brain | 1.04e-14 | 68 |
cerebral hemisphere | 1.30e-13 | 32 |
telencephalon | 3.16e-13 | 34 |
brain grey matter | 5.41e-13 | 34 |
gray matter | 5.41e-13 | 34 |
regional part of telencephalon | 1.18e-12 | 32 |
regional part of cerebral cortex | 1.50e-12 | 22 |
neocortex | 1.96e-11 | 20 |
cerebral cortex | 4.35e-11 | 25 |
pallium | 4.35e-11 | 25 |
organ system subdivision | 2.78e-10 | 223 |
neurectoderm | 3.51e-09 | 86 |
pre-chordal neural plate | 4.43e-09 | 61 |
neural plate | 1.87e-08 | 82 |
presumptive neural plate | 1.87e-08 | 82 |
ectoderm-derived structure | 2.62e-07 | 171 |
ectoderm | 2.62e-07 | 171 |
presumptive ectoderm | 2.62e-07 | 171 |