FFCP PHASE1:Hg19::chr8:38758845..38758875,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59339 | |EntrezGene=59339 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14336 | |HGNC=14336 | ||
|TSSclassifier=strong | |||
|UniProt=E5RGP3 | |UniProt=E5RGP3 | ||
|association_with_transcript=0bp_to_ENST00000519640_5end | |association_with_transcript=0bp_to_ENST00000519640_5end | ||
|cluster_id=chr8:38758845..38758875,+ | |||
|coexpression_cluster_id=C4752 | |coexpression_cluster_id=C4752 | ||
|description=CAGE_peak_3_at_PLEKHA2_5end | |description=CAGE_peak_3_at_PLEKHA2_5end | ||
|id=chr8:38758845..38758875,+ | |id=chr8:38758845..38758875,+ | ||
|ontology_enrichment_celltype=CL:0000860;3.44e-13;33!CL:0002057;3.44e-13;33!CL:0000473;4.10e-12;39!CL:0000234;4.10e-12;39!CL:0000576;2.07e-10;48!CL:0000766;2.50e-10;69!CL:0000236;6.30e-08;13!CL:0002087;1.04e-07;104 | |ontology_enrichment_celltype=CL:0000738!1.11e-29!140;CL:0002087!9.92e-25!119;CL:0002031!4.15e-23!124;CL:0000766!1.25e-22!76;CL:0000037!6.42e-21!172;CL:0000566!6.42e-21!172;CL:0000988!1.05e-19!182;CL:0002032!8.15e-19!165;CL:0000837!8.15e-19!165;CL:0000557!1.05e-18!71;CL:0000860!2.32e-17!45;CL:0002009!1.03e-16!65;CL:0002194!1.23e-16!63;CL:0000576!1.23e-16!63;CL:0000040!1.23e-16!63;CL:0000559!1.23e-16!63;CL:0000839!2.46e-16!70;CL:0002057!7.43e-16!42;CL:0000763!1.97e-11!112;CL:0000049!1.97e-11!112;CL:0000542!1.25e-07!53;CL:0000051!1.25e-07!53;CL:0000236!1.77e-07!14;CL:0000838!2.36e-07!52 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;3.44e-13;33!CL:0002057;3.44e-13;33!CL:0000473;4.10e-12;39!CL:0000234;4.10e-12;39!CL:0000576;2.07e-10;48!CL:0000766;2.50e-10;69!CL:0000236;6.30e-08;13!CL:0002087;1.04e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.93e-27,136;CL:0002087,2.31e-22,115;CL:0002031,3.89e-21,120;CL:0000766,7.71e-21,72;CL:0000037,1.96e-19,168;CL:0000988,4.86e-19,177;CL:0000473,8.92e-18,48;CL:0000234,8.92e-18,48;CL:0002032,1.74e-17,161;CL:0000837,1.74e-17,161;CL:0000557,6.60e-17,67;CL:0000860,2.45e-16,42;CL:0002057,2.45e-16,42;CL:0000839,6.50e-15,66;CL:0002009,6.75e-15,61;CL:0002194,8.36e-15,59;CL:0000576,8.36e-15,59;CL:0000040,8.36e-15,59;CL:0000559,8.36e-15,59;CL:0000763,1.27e-10,108;CL:0000049,1.27e-10,108;CL:0000236,1.12e-07,14;CL:0000542,3.15e-07,53;CL:0000051,3.15e-07,53;CL:0000838,5.96e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;2.81e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.75e-18!102;UBERON:0003061!1.75e-18!102;UBERON:0002371!2.34e-18!80;UBERON:0001474!1.37e-16!86;UBERON:0002193!2.10e-14!112;UBERON:0004765!3.34e-12!101;UBERON:0001434!3.34e-12!101;UBERON:0002204!3.79e-10!167;UBERON:0002405!1.94e-09!115;UBERON:0003081!2.66e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.31e-16,98;UBERON:0003061,1.31e-16,98;UBERON:0002371,2.70e-16,76;UBERON:0001474,1.29e-14,82;UBERON:0004765,4.17e-14,90;UBERON:0002193,3.15e-13,108;UBERON:0002405,4.72e-13,93;UBERON:0001434,6.61e-11,100;UBERON:0002204,5.67e-09,167;UBERON:0003081,9.56e-07,203 | |||
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| ||
|short_description=p3@PLEKHA2 | |short_description=p3@PLEKHA2 | ||
}} | }} |
Latest revision as of 04:20, 18 September 2015
Short description: | p3@PLEKHA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLEKHA2_5end |
Coexpression cluster: | C4752_Mast_Basophils_CD8_Neutrophils_CD34_Eosinophils_Natural |
Association with transcript: | 0bp_to_ENST00000519640_5end |
EntrezGene: | PLEKHA2 |
HGNC: | 14336 |
UniProt: | E5RGP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.93e-27 | 136 |
nongranular leukocyte | 2.31e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 3.89e-21 | 120 |
myeloid leukocyte | 7.71e-21 | 72 |
hematopoietic stem cell | 1.96e-19 | 168 |
hematopoietic cell | 4.86e-19 | 177 |
defensive cell | 8.92e-18 | 48 |
phagocyte | 8.92e-18 | 48 |
hematopoietic oligopotent progenitor cell | 1.74e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.74e-17 | 161 |
granulocyte monocyte progenitor cell | 6.60e-17 | 67 |
classical monocyte | 2.45e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.45e-16 | 42 |
myeloid lineage restricted progenitor cell | 6.50e-15 | 66 |
macrophage dendritic cell progenitor | 6.75e-15 | 61 |
monopoietic cell | 8.36e-15 | 59 |
monocyte | 8.36e-15 | 59 |
monoblast | 8.36e-15 | 59 |
promonocyte | 8.36e-15 | 59 |
myeloid cell | 1.27e-10 | 108 |
common myeloid progenitor | 1.27e-10 | 108 |
B cell | 1.12e-07 | 14 |
lymphocyte | 3.15e-07 | 53 |
common lymphoid progenitor | 3.15e-07 | 53 |
lymphoid lineage restricted progenitor cell | 5.96e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.31e-16 | 98 |
blood island | 1.31e-16 | 98 |
bone marrow | 2.70e-16 | 76 |
bone element | 1.29e-14 | 82 |
skeletal element | 4.17e-14 | 90 |
hemolymphoid system | 3.15e-13 | 108 |
immune system | 4.72e-13 | 93 |
skeletal system | 6.61e-11 | 100 |
musculoskeletal system | 5.67e-09 | 167 |
lateral plate mesoderm | 9.56e-07 | 203 |