FFCP PHASE1:Hg19::chr13:95954034..95954041,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:95954034..95954041,-
|short_description=p5@ABCC4
|description=CAGE_peak_5_at_ABCC4_5end
|association_with_transcript=-347bp_to_ENST00000412704,ENST0000043...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10257 | |EntrezGene=10257 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=55 | |HGNC=55 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVZ4,B7Z3Q7,O15439,Q59GY6 | |UniProt=Q8IVZ4,B7Z3Q7,O15439,Q59GY6 | ||
|association_with_transcript=-347bp_to_ENST00000412704,ENST00000431522,ENST00000536256,NM_001105515,NM_005845,uc001vmd.3,uc001vme.2,uc001vmf.2,uc010afk.2,uc010afl.1,uc010afm.1,uc010tih.1_5end | |||
|cluster_id=chr13:95954034..95954041,- | |||
|description=CAGE_peak_5_at_ABCC4_5end | |||
|id=chr13:95954034..95954041,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;2.10e-10;2!CL:0000558;2.10e-10;2!CL:0001014;1.17e-09;2!CL:0001016;1.17e-09;2!CL:0000453;2.92e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.02e-10,2;CL:0000765,2.02e-10,2;CL:0000050,2.02e-10,2;CL:0000038,2.02e-10,2;CL:0000558,2.02e-10,2;CL:0000547,2.02e-10,2;CL:0000549,2.02e-10,2;CL:0000550,2.02e-10,2;CL:0000552,2.02e-10,2;CL:0001014,8.44e-10,2;CL:0001016,8.44e-10,2;CL:0000453,1.88e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;1.25e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.92e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0001046!1.29e-07!19;UBERON:0000162!8.96e-07!14;UBERON:0001353!8.96e-07!14;UBERON:0000163!8.96e-07!14;UBERON:0006866!8.96e-07!14;UBERON:0000164!8.96e-07!14;UBERON:0000931!8.96e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002367;1.96e-09;11!UBERON:0010147;1.96e-09;11!UBERON:0003937;1.26e-08;12!UBERON:0005399;1.26e-08;12!UBERON:0000077;9.66e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000162,2.18e-10,14;UBERON:0001353,2.18e-10,14;UBERON:0000163,2.18e-10,14;UBERON:0006866,2.18e-10,14;UBERON:0000164,2.18e-10,14;UBERON:0000931,2.18e-10,14;UBERON:0004122,1.18e-09,15;UBERON:0002367,1.56e-09,11;UBERON:0010147,1.56e-09,11;UBERON:0009846,1.56e-09,11;UBERON:0003353,1.56e-09,11;UBERON:0004902,1.56e-09,11;UBERON:0003820,1.56e-09,11;UBERON:0009847,1.56e-09,11;UBERON:0003937,1.03e-08,12;UBERON:0005399,1.03e-08,12;UBERON:0001046,1.71e-07,19 | |||
|phase1_expression=0.181678379270557,0,0.704772020479856,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.410623275218653,0.125542639594803,0.152826811495903,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.516833518338658,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0,0.264818361626438,0.573673241497627,0,1.12135520028461,0,0,0.622422070799533,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,2.37600571456411,0.741800787835671,0,0,0,0.125118519871964,0,0,0.30648779579902,1.65261864797256,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0,0,0,0,0.286804595389004,0,0,0.116193942869518,0.207322110030741,0.504641701751257,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0.220587945464788,0.653638332277218,0.474541238222193,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,5.10680917276711,0.414656231081544,0.576479813667846,0.37872730027914,0.317489471460845,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0.387815147273333,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0.519254429183621,0,1.32945394550784,0,0,1.83703117063371,0.728364672026868,1.18011973463482,0,0.0770153371044148,0,1.46139224653261,0.211103257785751,0,0,0,0,1.08378575017541,0,0,0,0.671624264166535,4.82371728621056,5.22870902049801,0,0,0,0,0.0915694648183434,0.330037999682352,0.574265537996172,0,0,0.290012154876366,0,0.307007349452259,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0.539617372749944,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0.818999468447914,2.68670320712054,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0.717056761020258,0.0982490410131212,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0.313359791546046,0,0.169291777801603,0.1605880751037,0,2.12923118845163,0.343505344755765,0,0,0,0.19538809540204,0,0,5.95002492647163,2.99764771198038,8.45922030527097,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0.659215496907038,0.211125408127993,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,1.38100767891707,2.3948309234694,0,0.969332746095218,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0.219385397153973,2.06983080686081,0.139423744278603,0.0769502585037971,1.02547850262301,0,0,0,0,0,0,0,0.784901281975124,2.6593869104025,0.451191321234361,0.392125068635479,0.503464760927528,1.51802986179348,4.60916079043098,0.421996129056054,0.163232808159148,0.989471500037586,0.216388639742091,0,0.884575645033392,0.611030144933625,0,0.123563938946503,0.313265848516366,0.808813595768125,0,0,0,0.391329237864179,0.242780379534093,0,0,0,0.189559738885464,0.300646838828985,0.622129148383483,0,0,0.313932918407225,0,0,0.554698692052555,0.520679215005393,0,0.34823682632161,0,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0.0969890164884194,0.176512253383001,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0.144090417154106,0,0,0,0,0,0.815425236441684,0.418411385249333,1.01998217636322,0,0,0.136905378891993,0,1.28929632425987,0,0,0.229160424011684,1.43574604915363,0,0,0.223171457441873,0.201550417460179,0.360299883542404,0,0,0,0,0.688992370603241,0.254019996197353,0,0.544813624446302,0,0.137539436597234,0,2.4747128070665,1.5476039091159,0.0607495566580247,0,0.630445658393585,0.367182116944987,0,0,0,0,0,0.5085370753095,0,0,0,0,3.3657933507229,0,1.81299346432201,0.146552233678082,0,0.129282956361551,0.26446520348538,0.855434189421647,0,0.427149650270779,0.943225830597996,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.372578417648301,6.22568857213039,0.124980407962107,0,0.570930667089935,0,0,0,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0.150257608997218,0.380805212168795,0.40687073320466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| ||
|short_description=p5@ABCC4 | |||
}} | }} |
Latest revision as of 05:53, 18 September 2015
Short description: | p5@ABCC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ABCC4_5end |
Coexpression cluster: | NA |
Association with transcript: | -347bp_to_ENST00000412704, ENST00000431522, ENST00000536256, NM_001105515, NM_005845, uc001vmd.3, uc001vme.2, uc001vmf.2, uc010afk.2, uc010afl.1, uc010afm.1, uc010tih.1_5end |
EntrezGene: | ABCC4 |
HGNC: | 55 |
UniProt: | Q8IVZ4B7Z3Q7O15439Q59GY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.02e-10 | 2 |
erythroblast | 2.02e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 2.02e-10 | 2 |
erythroid progenitor cell | 2.02e-10 | 2 |
reticulocyte | 2.02e-10 | 2 |
proerythroblast | 2.02e-10 | 2 |
basophilic erythroblast | 2.02e-10 | 2 |
polychromatophilic erythroblast | 2.02e-10 | 2 |
orthochromatic erythroblast | 2.02e-10 | 2 |
CD1a-positive Langerhans cell | 8.44e-10 | 2 |
immature CD1a-positive Langerhans cell | 8.44e-10 | 2 |
Langerhans cell | 1.88e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
cloaca | 2.18e-10 | 14 |
anal region | 2.18e-10 | 14 |
embryonic cloaca | 2.18e-10 | 14 |
terminal part of digestive tract | 2.18e-10 | 14 |
primitive urogenital sinus | 2.18e-10 | 14 |
proctodeum | 2.18e-10 | 14 |
genitourinary system | 1.18e-09 | 15 |
prostate gland | 1.56e-09 | 11 |
male accessory sex gland | 1.56e-09 | 11 |
embryonic cloacal epithelium | 1.56e-09 | 11 |
epithelium of hindgut | 1.56e-09 | 11 |
urogenital sinus epithelium | 1.56e-09 | 11 |
prostate bud | 1.56e-09 | 11 |
prostate field | 1.56e-09 | 11 |
sex gland | 1.03e-08 | 12 |
male reproductive gland | 1.03e-08 | 12 |
hindgut | 1.71e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.92e-08 | 31 |