FFCP PHASE1:Hg19::chr16:85932760..85932775,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3394 | |EntrezGene=3394 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5358 | |HGNC=5358 | ||
|TSSclassifier=strong | |||
|UniProt=Q02556 | |UniProt=Q02556 | ||
|association_with_transcript=0bp_to_NM_002163,uc002fjh.2_5end | |association_with_transcript=0bp_to_NM_002163,uc002fjh.2_5end | ||
|cluster_id=chr16:85932760..85932775,+ | |||
|coexpression_cluster_id=C1638 | |coexpression_cluster_id=C1638 | ||
|description=CAGE_peak_1_at_IRF8_5end | |description=CAGE_peak_1_at_IRF8_5end | ||
|id=chr16:85932760..85932775,+ | |id=chr16:85932760..85932775,+ | ||
|ontology_enrichment_celltype=CL:0000738!6.38e-46!140;CL:0002087!1.64e-44!119;CL:0002031!4.25e-41!124;CL:0000037!1.61e-36!172;CL:0000566!1.61e-36!172;CL:0002032!1.74e-33!165;CL:0000837!1.74e-33!165;CL:0002009!2.66e-33!65;CL:0002194!5.99e-32!63;CL:0000576!5.99e-32!63;CL:0000040!5.99e-32!63;CL:0000559!5.99e-32!63;CL:0000557!7.30e-32!71;CL:0000988!1.14e-31!182;CL:0000766!2.78e-29!76;CL:0002057!7.20e-29!42;CL:0000839!1.15e-28!70;CL:0000860!2.80e-25!45;CL:0000763!9.75e-21!112;CL:0000049!9.75e-21!112;CL:0000945!3.87e-13!24;CL:0000826!3.87e-13!24;CL:0000542!9.20e-12!53;CL:0000051!9.20e-12!53;CL:0000838!2.42e-11!52;CL:0000236!2.03e-09!14;CL:0000451!9.30e-07!10 | |ontology_enrichment_celltype=CL:0000738!6.38e-46!140;CL:0002087!1.64e-44!119;CL:0002031!4.25e-41!124;CL:0000037!1.61e-36!172;CL:0000566!1.61e-36!172;CL:0002032!1.74e-33!165;CL:0000837!1.74e-33!165;CL:0002009!2.66e-33!65;CL:0002194!5.99e-32!63;CL:0000576!5.99e-32!63;CL:0000040!5.99e-32!63;CL:0000559!5.99e-32!63;CL:0000557!7.30e-32!71;CL:0000988!1.14e-31!182;CL:0000766!2.78e-29!76;CL:0002057!7.20e-29!42;CL:0000839!1.15e-28!70;CL:0000860!2.80e-25!45;CL:0000763!9.75e-21!112;CL:0000049!9.75e-21!112;CL:0000945!3.87e-13!24;CL:0000826!3.87e-13!24;CL:0000542!9.20e-12!53;CL:0000051!9.20e-12!53;CL:0000838!2.42e-11!52;CL:0000236!2.03e-09!14;CL:0000451!9.30e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.06e-24;33!CL:0002057;7.06e-24;33!CL:0000576;3.10e-23;48!CL:0000473;3.49e-23;39!CL:0000234;3.49e-23;39!CL:0000766;8.13e-16;69!CL:0002087;4.41e-15;104!CL:0000945;1.04e-14;24!CL:0000738;4.28e-12;136!CL:0000236;9.77e-10;13!CL:0000763;1.96e-08;100!CL:0000542;3.58e-08;53!CL:0000451;2.23e-07;10!CL:0000988;9.37e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.46e-55,136;CL:0002087,1.10e-53,115;CL:0002031,3.04e-49,120;CL:0000037,1.60e-45,168;CL:0002009,3.77e-42,61;CL:0002032,6.60e-42,161;CL:0000837,6.60e-42,161;CL:0002194,1.31e-40,59;CL:0000576,1.31e-40,59;CL:0000040,1.31e-40,59;CL:0000559,1.31e-40,59;CL:0000988,1.87e-40,177;CL:0000557,2.58e-40,67;CL:0000766,2.77e-37,72;CL:0000839,7.24e-36,66;CL:0000473,8.50e-36,48;CL:0000234,8.50e-36,48;CL:0000860,5.49e-32,42;CL:0002057,5.49e-32,42;CL:0000763,2.79e-27,108;CL:0000049,2.79e-27,108;CL:0000945,1.05e-14,24;CL:0000826,1.05e-14,24;CL:0000542,4.98e-13,53;CL:0000051,4.98e-13,53;CL:0000838,1.47e-12,52;CL:0000236,1.90e-10,14;CL:0000451,2.37e-07,10;CL:0002393,3.55e-07,9;CL:0002397,3.55e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.77e-23;42!CL:0000051;3.58e-08;53!CL:0000049;5.56e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.23e-33!112;UBERON:0002390!5.03e-32!102;UBERON:0003061!5.03e-32!102;UBERON:0007023!1.01e-30!115;UBERON:0002371!8.36e-26!80;UBERON:0002405!2.05e-24!115;UBERON:0001474!1.32e-22!86;UBERON:0004765!2.69e-16!101;UBERON:0001434!2.69e-16!101;UBERON:0001049!8.63e-11!57;UBERON:0005068!8.63e-11!57;UBERON:0006241!8.63e-11!57;UBERON:0007135!8.63e-11!57;UBERON:0003080!3.88e-09!42;UBERON:0002780!8.02e-09!41;UBERON:0001890!8.02e-09!41;UBERON:0006240!8.02e-09!41;UBERON:0002616!7.65e-08!59;UBERON:0001893!1.13e-07!34;UBERON:0002020!1.37e-07!34;UBERON:0003528!1.37e-07!34;UBERON:0002791!1.90e-07!33;UBERON:0003081!3.34e-07!216;UBERON:0001869!5.61e-07!32 | |ontology_enrichment_uberon=UBERON:0002193!8.23e-33!112;UBERON:0002390!5.03e-32!102;UBERON:0003061!5.03e-32!102;UBERON:0007023!1.01e-30!115;UBERON:0002371!8.36e-26!80;UBERON:0002405!2.05e-24!115;UBERON:0001474!1.32e-22!86;UBERON:0004765!2.69e-16!101;UBERON:0001434!2.69e-16!101;UBERON:0001049!8.63e-11!57;UBERON:0005068!8.63e-11!57;UBERON:0006241!8.63e-11!57;UBERON:0007135!8.63e-11!57;UBERON:0003080!3.88e-09!42;UBERON:0002780!8.02e-09!41;UBERON:0001890!8.02e-09!41;UBERON:0006240!8.02e-09!41;UBERON:0002616!7.65e-08!59;UBERON:0001893!1.13e-07!34;UBERON:0002020!1.37e-07!34;UBERON:0003528!1.37e-07!34;UBERON:0002791!1.90e-07!33;UBERON:0003081!3.34e-07!216;UBERON:0001869!5.61e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.61e-09;114!UBERON:0002780;5.79e-07;41!UBERON:0001890;5.79e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.99e-40,108;UBERON:0002390,5.00e-40,98;UBERON:0003061,5.00e-40,98;UBERON:0002405,1.42e-35,93;UBERON:0002371,2.08e-33,76;UBERON:0007023,2.41e-33,114;UBERON:0001474,9.70e-30,82;UBERON:0004765,1.84e-24,90;UBERON:0001434,5.39e-20,100;UBERON:0003081,2.23e-11,203;UBERON:0001049,1.35e-10,56;UBERON:0005068,1.35e-10,56;UBERON:0006241,1.35e-10,56;UBERON:0007135,1.35e-10,56;UBERON:0000073,1.06e-09,53;UBERON:0002616,1.06e-09,53;UBERON:0002780,6.25e-09,41;UBERON:0001890,6.25e-09,41;UBERON:0003080,6.25e-09,41;UBERON:0006240,6.25e-09,41;UBERON:0001893,1.19e-07,34;UBERON:0003528,1.45e-07,34;UBERON:0002020,1.45e-07,34;UBERON:0002791,4.89e-07,32;UBERON:0001869,6.70e-07,32 | |||
|phase1_expression=0,0.642301571672949,0.281908808191942,0,0.446961094427288,0,12.6649939084155,0,0,0.491467873003018,0,0,0.791300934685361,0,0,16.8081286612944,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0,117.218164417357,93.3483702045883,104.921471491134,136.890768343419,94.0382025338171,179.277070800016,0,0,0,195.759615866422,127.667970773705,155.314632408134,178.940516955796,153.817591209599,176.863859633419,235.78299437464,185.914964294894,204.772576269178,86.511952073841,156.062764743478,190.913656154811,107.847073124238,189.13722849004,254.578636875775,914.574115192116,1235.20692688332,1210.31605256978,255.456549425834,400.845988505556,456.387259822932,73.9792394402436,93.3339033197833,128.317109618143,148.144603907517,230.427041440635,272.357615590392,937.767246430834,1004.10005246729,1066.4143258328,201.985630085494,417.028140147988,278.401545301022,937.660018738166,1191.06698567174,1142.41332314891,262.743384142882,703.778562372236,438.933331380507,153.582593148782,131.176853078432,203.159227497616,140.635446195412,142.517871306589,196.245941357135,79.2335427600671,66.8360035388943,130.056877480419,330.872939587287,338.059800371259,352.245664529968,309.379411360718,368.364308073131,344.85146397269,343.082288975343,341.55124412366,594.258339750264,431.61933418764,501.5424753003,42.2948251452883,113.22272972227,234.938603619369,2.55722701147983,2.75107533924415,2.87842098599313,0,3.2592226663359,0.946895611469467,0,0,0.883817722424512,0.886135578334485,0.270803863765016,0,0,0.493313713811028,0.552700035571697,0.869409257205157,2.22429844743091,8.29376567078111,4.18142095219907,0,1.53288197440768,1.03088233644789,1.51811815211702,4.14135038621326,1.30216690771284,2.85135613334512,17.6172889320994,10.6228887258167,8.74515085866421,6.62976305723247,1.64225599384209,4.43534835094411,3.7441627409691,2.89648807765598,0,8.71911117614727,0.255725123687061,0,0,0,0,0,0,0,0.790513071238134,15.1280832199858,0,0,46.085729898965,51.3682725032838,54.246847891697,2341.26245880554,1868.1353786079,1824.22778902949,0,0,0,0,0,0,0,0.516833518338658,0,1.33888245105868,2.01414658554573,0,5.85748938115607,0,0,0,0,0,0,0,0,3.9534125230819,15.511210565933,0,0,0,0,0,3.54668382198357,0,0,0,0.311211035399766,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0.103325781175765,0,0,1.82032272387605,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0.725627385107593,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,2.4694440679884,0,8.87285243752816,38.3302614504274,21.859226547212,0,17.5873467116652,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0,17.612706626851,18.0564349904878,17.3131278533484,0,0,120.15389897065,44.2268061113159,70.8970644117234,0,0,0,0,0,0,0,0,1.86595303986695,1.8735593944205,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,220.139042960555,185.835123829887,147.583757638122,0,0,0,0,0,0,0,35.4655368363469,23.9346608094064,53.9040752374943,0.254094624222463,0,0,1.67516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,110.620893975745,103.542816392936,92.1058823843725,0.606255142892519,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,20.9086847793506,0,0,0,0,0,0,0.15403067420883,0,0,0.316654886678627,0,0,0.215915916102139,3.08454505380579,0,0,1.52925763827023,0,0,0,0.261435451024901,0,0,0.325378394664303,23.9055147022716,0,0,0,0,0,0,0,0,0,0,0,1.02271952899321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.54907405947211,0.353437207037059,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,1.8589409885985,0,0,0,0,0,0.844430541190656,0,0,0,0,2.68120910214315,0,23.2535187918645,0,0,0,0,41.1032563478057,57.3477905356781,55.2557771558938,56.2226990080382,71.1656732439116,56.4171780737664,48.6028293514303,49.966886106539,0,4.81239927631679,0,57.4131811138471,0,0,0,0,1.7235483311913,0,0,0,70.7527505002896,0,0,0,154.646316324863,258.707224618923,161.395724084634,0,327.211413988508,332.830048543915,330.361300589579,39.6637833666142,0,0,0,0,0,21.7083026873535,45.4175355742871,0,0,0,0.47748896947538,7.12715233998333,0,5.96488588659779,27.149197367229,0,8.24019371133798,0,14.345855154077,135.102834694731,31.2396607339302,0,210.59810214389,0,0,0,220.487691567782,30.4808123418125,83.8190823214289,0,10.6626602070474,7.32867975478625,0,4.16684417736373,0,23.1999864139134,0,0,0,0,1.74962768029953,0,7.08593108651071,21.1043767594464,1.52581736317083,7.6299689352545,3.54657142744257,4.8264787373874,0,0,6.15602068030377,0,1.84451123510448,9.24503737420653,1.08647371922008,11.803042910081,14.5640173508961,30.9160170090808,0,0,0,0,0,0,0,0,0,0,18.0931931435444,0,25.8768102080411,27.4218449960351,33.6066579713494,0,0.123563938946503,0,31.3415268360148,16.8541305932746,12.8845445148937,147.605924475474,0.19566461893209,0,24.4642329766622,31.4575861726526,2.14250933141343,54.3404584804996,8.86908174545506,1.34794648816421,0,0,0.313932918407225,0,0,0,2.2562765983567,0,0,13.2792267863943,0,0,0,0,14.5483524732629,0,5.1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| 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| ||
|short_description=p1@IRF8 | |short_description=p1@IRF8 | ||
}} | }} |
Latest revision as of 06:10, 18 September 2015
Short description: | p1@IRF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IRF8_5end |
Coexpression cluster: | C1638_Dendritic_CD14_CD19_granulocyte_immature_acute_xeroderma |
Association with transcript: | 0bp_to_NM_002163, uc002fjh.2_5end |
EntrezGene: | IRF8 |
HGNC: | 5358 |
UniProt: | Q02556 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.99e-40 | 108 |
hematopoietic system | 5.00e-40 | 98 |
blood island | 5.00e-40 | 98 |
immune system | 1.42e-35 | 93 |
bone marrow | 2.08e-33 | 76 |
adult organism | 2.41e-33 | 114 |
bone element | 9.70e-30 | 82 |
skeletal element | 1.84e-24 | 90 |
skeletal system | 5.39e-20 | 100 |
lateral plate mesoderm | 2.23e-11 | 203 |
neural tube | 1.35e-10 | 56 |
neural rod | 1.35e-10 | 56 |
future spinal cord | 1.35e-10 | 56 |
neural keel | 1.35e-10 | 56 |
regional part of nervous system | 1.06e-09 | 53 |
regional part of brain | 1.06e-09 | 53 |
regional part of forebrain | 6.25e-09 | 41 |
forebrain | 6.25e-09 | 41 |
anterior neural tube | 6.25e-09 | 41 |
future forebrain | 6.25e-09 | 41 |
telencephalon | 1.19e-07 | 34 |
brain grey matter | 1.45e-07 | 34 |
gray matter | 1.45e-07 | 34 |
regional part of telencephalon | 4.89e-07 | 32 |
cerebral hemisphere | 6.70e-07 | 32 |