FFCP PHASE1:Hg19::chr21:36259445..36259519,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=861 | |EntrezGene=861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10471 | |HGNC=10471 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000399240_5end | |association_with_transcript=0bp_to_ENST00000399240_5end | ||
|cluster_id=chr21:36259445..36259519,- | |||
|description=CAGE_peak_4_at_RUNX1_5end | |description=CAGE_peak_4_at_RUNX1_5end | ||
|id=chr21:36259445..36259519,- | |id=chr21:36259445..36259519,- | ||
|ontology_enrichment_celltype=CL:0002371!5.93e-22!591;CL:0000144!1.41e-20!625;CL:0000548!6.33e-17!679;CL:0000004!6.33e-17!679;CL:0000255!6.33e-17!679;CL:0000012!7.34e-17!682;CL:0000048!1.06e-14!430;CL:0000055!6.32e-14!180;CL:0000723!1.50e-13!436;CL:0000034!6.96e-12!444;CL:0002057!1.24e-11!42;CL:0002194!1.85e-10!63;CL:0000576!1.85e-10!63;CL:0000040!1.85e-10!63;CL:0000559!1.85e-10!63;CL:0002320!2.60e-10!365;CL:0000860!3.91e-10!45;CL:0002009!8.44e-10!65;CL:0000134!1.47e-09!358;CL:0000057!1.87e-09!75;CL:0000557!2.92e-09!71;CL:0000839!1.28e-08!70;CL:0000003!1.60e-08!722;CL:0000219!1.68e-08!390;CL:0000680!1.68e-07!57;CL:0000056!1.68e-07!57;CL:0000355!1.68e-07!57;CL:0000183!1.76e-07!59;CL:0000766!2.35e-07!76;CL:0000187!8.51e-07!54 | |ontology_enrichment_celltype=CL:0002371!5.93e-22!591;CL:0000144!1.41e-20!625;CL:0000548!6.33e-17!679;CL:0000004!6.33e-17!679;CL:0000255!6.33e-17!679;CL:0000012!7.34e-17!682;CL:0000048!1.06e-14!430;CL:0000055!6.32e-14!180;CL:0000723!1.50e-13!436;CL:0000034!6.96e-12!444;CL:0002057!1.24e-11!42;CL:0002194!1.85e-10!63;CL:0000576!1.85e-10!63;CL:0000040!1.85e-10!63;CL:0000559!1.85e-10!63;CL:0002320!2.60e-10!365;CL:0000860!3.91e-10!45;CL:0002009!8.44e-10!65;CL:0000134!1.47e-09!358;CL:0000057!1.87e-09!75;CL:0000557!2.92e-09!71;CL:0000839!1.28e-08!70;CL:0000003!1.60e-08!722;CL:0000219!1.68e-08!390;CL:0000680!1.68e-07!57;CL:0000056!1.68e-07!57;CL:0000355!1.68e-07!57;CL:0000183!1.76e-07!59;CL:0000766!2.35e-07!76;CL:0000187!8.51e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.16e-15;33!CL:0002057;9.16e-15;33!CL:0000473;2.75e-11;39!CL:0000234;2.75e-11;39!CL:0000576;3.96e-08;48!CL:0002620;7.82e-07;23!CL:0000134;8.44e-07;55 | |ontology_enrichment_celltype_v019=CL:0000860;9.16e-15;33!CL:0002057;9.16e-15;33!CL:0000473;2.75e-11;39!CL:0000234;2.75e-11;39!CL:0000576;3.96e-08;48!CL:0002620;7.82e-07;23!CL:0000134;8.44e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.34e-16,427;CL:0000723,3.50e-15,433;CL:0000034,1.11e-13,441;CL:0000860,5.78e-12,42;CL:0002057,5.78e-12,42;CL:0000473,2.36e-11,48;CL:0000234,2.36e-11,48;CL:0002320,3.07e-11,361;CL:0002194,4.18e-11,59;CL:0000576,4.18e-11,59;CL:0000040,4.18e-11,59;CL:0000559,4.18e-11,59;CL:0000134,1.97e-10,354;CL:0002009,5.32e-10,61;CL:0000219,8.67e-10,386;CL:0000057,1.27e-09,76;CL:0000557,2.24e-09,67;CL:0000839,3.63e-09,66;CL:0000766,5.09e-08,72;CL:0000680,6.84e-08,58;CL:0000056,6.84e-08,58;CL:0000355,6.84e-08,58;CL:0000187,3.75e-07,55;CL:0000192,7.47e-07,43;CL:0000514,7.47e-07,43;CL:0002620,8.89e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-09;42 | |ontology_enrichment_development_v019=CL:0002057;1.41e-09;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.30e-15!167;UBERON:0002371!2.37e-10!80;UBERON:0002384!3.79e-10!375;UBERON:0001474!2.08e-09!86;UBERON:0004765!2.59e-09!101;UBERON:0001434!2.59e-09!101;UBERON:0003081!1.54e-08!216;UBERON:0000926!1.88e-08!448;UBERON:0004120!1.88e-08!448;UBERON:0006603!1.88e-08!448;UBERON:0000486!1.15e-07!82;UBERON:0000914!1.18e-07!83;UBERON:0002329!1.18e-07!83;UBERON:0003077!1.18e-07!83;UBERON:0003059!1.18e-07!83;UBERON:0007282!1.18e-07!83;UBERON:0009618!1.18e-07!83;UBERON:0007285!1.18e-07!83;UBERON:0004290!2.40e-07!70;UBERON:0002390!2.67e-07!102;UBERON:0003061!2.67e-07!102 | |ontology_enrichment_uberon=UBERON:0002204!2.30e-15!167;UBERON:0002371!2.37e-10!80;UBERON:0002384!3.79e-10!375;UBERON:0001474!2.08e-09!86;UBERON:0004765!2.59e-09!101;UBERON:0001434!2.59e-09!101;UBERON:0003081!1.54e-08!216;UBERON:0000926!1.88e-08!448;UBERON:0004120!1.88e-08!448;UBERON:0006603!1.88e-08!448;UBERON:0000486!1.15e-07!82;UBERON:0000914!1.18e-07!83;UBERON:0002329!1.18e-07!83;UBERON:0003077!1.18e-07!83;UBERON:0003059!1.18e-07!83;UBERON:0007282!1.18e-07!83;UBERON:0009618!1.18e-07!83;UBERON:0007285!1.18e-07!83;UBERON:0004290!2.40e-07!70;UBERON:0002390!2.67e-07!102;UBERON:0003061!2.67e-07!102 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p4@RUNX1 | |short_description=p4@RUNX1 | ||
}} | }} |
Latest revision as of 06:34, 18 September 2015
Short description: | p4@RUNX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RUNX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000399240_5end |
EntrezGene: | RUNX1 |
HGNC: | 10471 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.34e-16 | 427 |
somatic stem cell | 3.50e-15 | 433 |
stem cell | 1.11e-13 | 441 |
classical monocyte | 5.78e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.78e-12 | 42 |
defensive cell | 2.36e-11 | 48 |
phagocyte | 2.36e-11 | 48 |
connective tissue cell | 3.07e-11 | 361 |
monopoietic cell | 4.18e-11 | 59 |
monocyte | 4.18e-11 | 59 |
monoblast | 4.18e-11 | 59 |
promonocyte | 4.18e-11 | 59 |
mesenchymal cell | 1.97e-10 | 354 |
macrophage dendritic cell progenitor | 5.32e-10 | 61 |
motile cell | 8.67e-10 | 386 |
fibroblast | 1.27e-09 | 76 |
granulocyte monocyte progenitor cell | 2.24e-09 | 67 |
myeloid lineage restricted progenitor cell | 3.63e-09 | 66 |
myeloid leukocyte | 5.09e-08 | 72 |
muscle precursor cell | 6.84e-08 | 58 |
myoblast | 6.84e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.84e-08 | 58 |
muscle cell | 3.75e-07 | 55 |
smooth muscle cell | 7.47e-07 | 43 |
smooth muscle myoblast | 7.47e-07 | 43 |
skin fibroblast | 8.89e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.22e-15 | 167 |
connective tissue | 2.85e-11 | 371 |
mesoderm | 4.95e-11 | 315 |
mesoderm-derived structure | 4.95e-11 | 315 |
presumptive mesoderm | 4.95e-11 | 315 |
bone marrow | 2.34e-10 | 76 |
skeletal system | 2.79e-09 | 100 |
bone element | 3.22e-09 | 82 |
skeletal element | 1.02e-08 | 90 |
multilaminar epithelium | 2.74e-08 | 83 |
epithelial vesicle | 5.25e-08 | 78 |
immune system | 5.49e-08 | 93 |
somite | 5.76e-08 | 71 |
presomitic mesoderm | 5.76e-08 | 71 |
presumptive segmental plate | 5.76e-08 | 71 |
dermomyotome | 5.76e-08 | 71 |
trunk paraxial mesoderm | 5.76e-08 | 71 |
dense mesenchyme tissue | 7.49e-08 | 73 |
paraxial mesoderm | 1.46e-07 | 72 |
presumptive paraxial mesoderm | 1.46e-07 | 72 |
lateral plate mesoderm | 3.76e-07 | 203 |
skeletal muscle tissue | 4.59e-07 | 62 |
striated muscle tissue | 4.59e-07 | 62 |
myotome | 4.59e-07 | 62 |
hematopoietic system | 6.31e-07 | 98 |
blood island | 6.31e-07 | 98 |