FFCP PHASE1:Hg19::chr21:36260463..36260480,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=861 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10471 | |||
|TSSclassifier=strong | |||
|UniProt=Q01196 | |||
|association_with_transcript=-286bp_to_D10570_5end | |||
|cluster_id=chr21:36260463..36260480,- | |||
|coexpression_cluster_id=C979 | |||
|description=CAGE_peak_9_at_RUNX1_5end | |||
|id=chr21:36260463..36260480,- | |||
|ontology_enrichment_celltype=CL:0002057!1.13e-19!42;CL:0000860!2.57e-17!45;CL:0002320!3.06e-15!365;CL:0000134!1.38e-14!358;CL:0002194!1.62e-14!63;CL:0000576!1.62e-14!63;CL:0000040!1.62e-14!63;CL:0000559!1.62e-14!63;CL:0000766!9.23e-14!76;CL:0000557!2.30e-13!71;CL:0000839!3.06e-13!70;CL:0002009!3.33e-13!65;CL:0002371!6.70e-13!591;CL:0000723!2.32e-12!436;CL:0000048!3.65e-12!430;CL:0000034!8.72e-12!444;CL:0000763!9.13e-12!112;CL:0000049!9.13e-12!112;CL:0000219!3.72e-11!390;CL:0000144!4.88e-11!625;CL:0000012!8.51e-11!682;CL:0000988!2.03e-10!182;CL:0000003!2.11e-10!722;CL:0000548!4.66e-10!679;CL:0000004!4.66e-10!679;CL:0000255!4.66e-10!679;CL:0000037!8.85e-10!172;CL:0000566!8.85e-10!172;CL:0000738!3.42e-09!140;CL:0002087!3.46e-09!119;CL:0000063!6.72e-09!578;CL:0002032!1.57e-08!165;CL:0000837!1.57e-08!165;CL:0002031!6.96e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.81e-30;33!CL:0002057;1.81e-30;33!CL:0000473;3.74e-21;39!CL:0000234;3.74e-21;39!CL:0000576;7.16e-15;48!CL:0000766;7.59e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.38e-28,42;CL:0002057,5.38e-28,42;CL:0000473,1.98e-24,48;CL:0000234,1.98e-24,48;CL:0000766,1.11e-20,72;CL:0000557,1.46e-20,67;CL:0002194,1.50e-20,59;CL:0000576,1.50e-20,59;CL:0000040,1.50e-20,59;CL:0000559,1.50e-20,59;CL:0000839,1.16e-19,66;CL:0002009,1.96e-19,61;CL:0000134,7.31e-18,354;CL:0002320,1.85e-17,361;CL:0000763,5.77e-16,108;CL:0000049,5.77e-16,108;CL:0000988,8.97e-15,177;CL:0002087,1.20e-14,115;CL:0000219,1.29e-14,386;CL:0000738,1.40e-14,136;CL:0000048,2.93e-14,427;CL:0000034,3.62e-14,441;CL:0000723,5.66e-14,433;CL:0000037,6.57e-14,168;CL:0002031,7.42e-14,120;CL:0002032,1.90e-13,161;CL:0000837,1.90e-13,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.69e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.18e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.68e-15!375;UBERON:0002371!6.76e-13!80;UBERON:0002390!1.26e-11!102;UBERON:0003061!1.26e-11!102;UBERON:0001474!2.95e-11!86;UBERON:0004765!6.68e-10!101;UBERON:0001434!6.68e-10!101;UBERON:0002193!2.21e-08!112;UBERON:0002405!2.68e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.41e-19,76;UBERON:0001474,3.54e-18,82;UBERON:0002384,1.16e-17,371;UBERON:0002390,1.18e-17,98;UBERON:0003061,1.18e-17,98;UBERON:0004765,6.13e-17,90;UBERON:0002405,7.59e-15,93;UBERON:0002193,1.71e-14,108;UBERON:0001434,1.84e-14,100;UBERON:0002204,3.30e-07,167 | |||
|phase1_expression=0.363356758541113,1.49870366723688,0.281908808191942,2.00146596706261,0.446961094427288,1.74467704820074,2.53299878168311,0,0.261185628199839,1.22866968250754,0.697801167972428,1.96597234917155,0.263766978228454,0.74259811776028,0.662794751455832,0,0,0,0.487932798790507,0.369363174230364,0.408001382488506,0.313454721478088,0,0.136874425072884,0.376627918784408,0,0,0,3.93364276848904,2.68680578668049,5.88301268601089,0,0,1.84877005083394,0,0,0.880801318004542,1.10799081706375,3.40925560699241,1.51907609501096,0.223915474239924,0.32389366601898,0.77272670290256,2.32637182047304,5.66813915533214,4.12392904019288,4.88100977501938,3.70051099219643,7.12324653058738,10.6446185159196,11.7833925003386,12.7700404139836,2.41321976515633,3.87290810150296,4.06279459783025,2.82363509313907,3.0019676506363,3.82029923556644,6.73384563215986,4.49300637906531,4.47535988059329,5.93732340336089,9.57425556583833,6.81959600852311,4.35313857942876,6.80862269629368,3.73693349397345,11.5574386018102,16.1659704710262,13.4657083717172,3.63239701580021,4.41933163185078,2.84816148696796,0.845021145247767,0.637812899895131,0.419317291016752,1.01095768031846,0.901061357049038,0.64290234678832,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0.764546456250458,2.64342657158052,2.80254281490768,0.263384084775077,1.57367816091066,1.17903228824749,1.02800749499755,1.33749196312542,0.651844533267181,0,0,1.78256731016278,3.24066498222321,0.443067789167242,4.60366568400527,1.40900451698243,1.8208308658383,0.493313713811028,0,0.869409257205157,0.889719378972363,0,0,1.92625882585863,1.14966148080576,0.68725489096526,1.26509846009751,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,1.20964045934839,1.33720097891754,0.144824403882799,0,0,0,1.0843174571537,0.50133791063589,1.15877215168659,7.95285947051099,4.37971383272372,1.22895262313288,0.221729397462564,0.702678285545008,0.392937226493138,1.09288586487763,0.370784442784429,0.97364218096405,1.21890816109487,1.32957960518865,11.9245312152671,0.571994910780128,5.57186251994347,0.198762407366705,0.860234595106124,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0.993943903390637,0.379891534993739,2.51577443545116,1.43418310374407,0.709336764396714,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0,0.756787138224657,0,0.937285727335186,0.624320153660641,0,0.149448680551801,0.117434498643765,0.647491777472526,0.140450806702248,0.408308342509787,0,1.03325781175765,0,0.247266929278557,0,0,0,0,0.554128230968366,0.877955241761676,0.30648779579902,0.300476117813194,0.226864366320042,1.25572744982203,0.85422955527427,1.69545520927649,2.10063767259082,2.67936576019941,0.772921620136887,2.04728541964749,0.843881661206331,1.07180705677318,1.26216887122057,1.84099797284599,0.969876340912871,2.4850671476163,0.705264687593482,0.339121184620975,0.966304265816484,0.818238361772504,2.00763216772303,0,0,0,0,0,0,3.12899064659632,0.643240938192885,0,0.464367928031979,0,0,0,0.241011029883482,0.441175890929576,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,0,0.4115740113314,0,0,0.982827216677626,0.590789906681404,0.882926198829301,0.122988438543114,0.514703430895577,0.768251997860379,1.1240175325762,0.703702806881416,0.925884451585296,0.325808305310325,0,0,0.579652024875384,0.469634776943287,0,0,0,1.58040879591855,0,0.492434012174795,0,0.297262324577456,0,1.00789276919316,0.567100388969546,0.716468181622786,0.290633938513962,1.53353071666084,36.9497428421958,3.78608266256872,0,0.288239906833923,0,0.126995788584338,0,1.17217447210047,0,0,0,0.571652865261156,0,0,0.22001485746285,4.52451005152222,0,0,1.86156681609409,0,0.257207374262142,0,0,1.57275793023962,2.17048642156577,0,0,1.06617584622764,0,0.301439377059586,0.871533458600294,0.399891964728228,0,0.502257091432126,2.10833939483032,0.718874566474748,0,0,0.868687840005475,1.02738161275192,0.716243852959582,1.45710687191585,1.37921532141349,0.862510299438069,1.41177339907723,1.01637849688985,1.30139853857622,0,0,1.27587750330633,0.749007023947182,0,0.414415513436035,0.858840442033979,2.50085260529839,0.542530047399471,1.45579603071565,1.07057393278297,0.946214490203608,0.35142424497814,0,0,0,0.664225598535437,0.553107505625109,1.12948698808508,0.587403472388222,0,1.24060815673732,0.862856803274467,1.06727557803444,0,1.66435439510497,0.30239029332968,1.24053903909388,2.30192959932094,0.561320188866147,1.79394808957981,1.02341449813341,1.12597744800525,0,0.308419387605311,1.24293207719189,0.9033987161519,0,0.581051892299796,0.120859449591622,1.40354529212299,0.736647911487171,0.574072240823034,0,0.917870904715969,0.902399225814824,0.770153371044148,0.784349769176855,0,0.422206515571503,0,0.170093705276516,0.215915916102139,0,1.08378575017541,0.501689773854853,0,0,0.223874754722178,0,0.261435451024901,0.256450125116389,0,0.325378394664303,0.618246069886334,0.0915694648183434,0.082509499920588,1.14853107599234,0.650060246036521,0,1.54673149267395,0.308097234229289,0,0.413509717453592,0.644521469209642,0.580066775656914,0.596586391912706,4.5406338179836,0.661139661443912,0.576570202095319,3.44554323735377,0.6069466851333,0.929691098594572,1.5740617341532,1.3940745403212,0,0,0,0,0.715624433709956,0,0.949138274156178,0,1.02359116524534,0.42793898803392,0.636406495851874,0.78494864019923,0.359744915166629,0.823611089208164,0.235624804691373,0.202182481573316,1.58510321173008,0.421258456238981,0.48763373908959,0.487426979262569,2.11300293513511,0.545999645631943,0.424216295861138,0,0,0.66343897524122,0.876901770507525,1.15755106853338,0.655894752046633,0.405820753925408,0.30982349809975,0,0.286822704408103,0.392996164052485,0,0,0.633322905892992,1.31717957183961,0.75894634753143,0,0.673554789078584,0,0,0.282431402330337,1.29151611801369,0,1.33029046061003,1.1486170010348,0,0.764637207142375,0,0,0,0,0,0.79312517629427,0,0,0.245040215981032,0,0.144269212976445,0.355709216742071,1.11598390910176,0.59873811429845,0,0.635020748171649,1.62310970137278,1.68478306868075,1.82587743226554,0.47003968731907,5.01268954180134,0,1.76646882614069,0.605399121573143,0,0.343505344755765,0.307240764308458,0.223676107892416,0.166849141711909,0,1.11362469558097,0,0.540911356951966,2.99764771198038,0,0.18714054040822,0.586032717087576,0,0.891547074219827,0,0.71623345421307,0,0.307160702099232,0.994147647766298,0.140669416410513,1.00177834520615,1.48323486804084,0,0.597743964753209,0.552567831062295,0,1.43176155503017,0.615424027305347,0.622079175323615,0.988551862620595,0.716084698702437,0.511572370226872,0.493217028184668,0,1.11136990144637,0,0,0,1.5625665665114,0.699679999969566,0.724999575434793,0,0.508507300585533,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0.697118721393016,0.230850775511391,0.91153644677601,0.23056390438806,0.807818799687949,0.108647371922008,0.957003479195758,0.641183153813036,0,5.10966490978682,1.2558420511602,0.831058409500782,0.451191321234361,0.392125068635479,0.671286347903371,0,0.317873157960757,0.210998064528027,0.163232808159148,0,0,0,0,0,2.37216902944498,2.34771483998355,3.13265848516366,0.134802265961354,0,0,0.182454789215666,0,0,0,0,0,1.26373159256976,0.300646838828985,0,1.32930774541437,0.661983911750998,1.56966459203613,0,0,0.138674673013139,0.173559738335131,0.195984794828755,0.609414446062818,0.52418000472609,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0,0,0.548167698587004,0,0,0,0.881747022766871,0.426905989478705,0.19980960958213,0.288180834308212,0,0.514784993585894,0.288109595976299,0.621262677827163,0.942776138467182,0.951329442515298,0.523014231561666,0,1.15580235960608,0,0.273810757783986,5.10986352267889,0.429765441419957,0,0.558564802544508,0,0.717873024576814,0,0,0,0,1.80149941771202,0,0.0787831823072236,0.0824158583811665,0.202210631562555,0.590564889088493,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,1.37280437475228,0.179287339332845,1.34340638123612,0.714695326373367,0,0,0,0,0.326587360109409,0,0.246277562248017,1.87426823963964,0.113312091520126,0,0,0,0,0,0,0.533937062838473,0.943225830597996,1.24271716604159,0,0.592834895693833,3.16660755790329,2.55336503108073,0.544017803369474,0,0.612691153526923,0.655745261419609,0.628216385000937,0,0,0,0,0.110929051536852,0.18628920882415,0,0.124980407962107,0.303298235083296,0.285465333544967,0.235265819698172,0,0,0.895528817321244,4.20683957725004,1.10961172300523,1.7046270474758,0.754703705257725,3.55924488638614,1.14420034198462,0,2.17612080815893,1.33069634990671,1.43367090447332,2.69881867298163,0.931577741257556,1.24411862352257,2.92425886013794,3.1304703708704,2.55437935295271,0.761610424337591,1.62748293281865,2.36403256963327,1.71856891267982,4.17630383890644,1.19428766609585,1.60011105865261,0.686791410365586,1.01024846629776,0,0.57785949122191,0.214441591374926,0.260994291965212,0.226705925512272,0.231522474323834,0,0.358177682162975,0,0.438568099157414,0,0.578742114812744,0,0.256241518587947,0,0.607719912354764,0,0.389720617678777,0.132864840313363,0.654261577023377,0,0.491545817507439,0.211312123358627,0.999936979274649,1.06691729694141,0,0,0.368211900503681,0.559518030877778,0,0,0,0,0,0,0,0,0,0.636008701306837,0.788617450012533,0,3.17408349321616,0.918736432059601,0.128458450192919,1.41696576325585,0.159633859057151,0,0,0.0691572524642179,0,0,0.490738592505128,0.353909170043221,0.733714394086716,0.808679663052368,0,0,0,0.225630985047772,1.41193548092464,0,0,0.327543835020193,1.33070477595341,0,0,0,0,0,0,0,0,0.894336993477167,0.535701835878287,0.672567444437648,0,0,0.0887023701626388,0.691403925334676,1.20041606606193,0.0679697329768317,0,0.945550727071746,0.556157009460346,0.078493092850514,0.157115589916002,0.280272163313789,0,0.431855182437243,0.9555033757741,0.0714765441766563,0,0,0,1.60342272946051,0,1.0243108625637,1.38251932362818,1.72090943528111,0.946656005844523,0.511280428554946,0.846774100381858,1.3746412112643,0.31020638566432,0,0,0.196300467230486,0.121917924982269,0,1.12929087541872,0,0.485710993059139,0.467878926924211,0.198950775161368,0,0.45178432815584,0,0.301925687133347,0.0771741581079447,0.218559560503957,0,0,0,0.785233868459781,0.297046400327086,0,0.679708458751268,0.0939839179798536,0.45120521581504,0,0.535661815816973,0,0.401206833445841,0,0,0,0,0,0,0,0.743990036333503,0.924351257262837,0.432626562123789,0,0.109265571963696,0.253397002022874,0,0,0.18378979906969,0.250707539292375,0.0757786982182394,0,0,0.103432995861895,0.639701945702943,0.476128862927481,0.775066918032073,0.434523000071005,0.560659312903067,0,0,0.653150243690884,0,0.26940821205835,1.29099969706817,1.33064142618405,1.13964576055364,0.320182037633146,1.9307228228694,0.269475606319761,0,0.122241444182866,0,0,0.603821380773079,0 | |||
|short_description=p9@RUNX1 | |||
}} |
Latest revision as of 06:36, 18 September 2015
Short description: | p9@RUNX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RUNX1_5end |
Coexpression cluster: | C979_Mast_CD14_Eosinophils_immature_Neutrophils_CD4_Basophils |
Association with transcript: | -286bp_to_D10570_5end |
EntrezGene: | RUNX1 |
HGNC: | 10471 |
UniProt: | Q01196 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.38e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.38e-28 | 42 |
defensive cell | 1.98e-24 | 48 |
phagocyte | 1.98e-24 | 48 |
myeloid leukocyte | 1.11e-20 | 72 |
granulocyte monocyte progenitor cell | 1.46e-20 | 67 |
monopoietic cell | 1.50e-20 | 59 |
monocyte | 1.50e-20 | 59 |
monoblast | 1.50e-20 | 59 |
promonocyte | 1.50e-20 | 59 |
myeloid lineage restricted progenitor cell | 1.16e-19 | 66 |
macrophage dendritic cell progenitor | 1.96e-19 | 61 |
mesenchymal cell | 7.31e-18 | 354 |
connective tissue cell | 1.85e-17 | 361 |
myeloid cell | 5.77e-16 | 108 |
common myeloid progenitor | 5.77e-16 | 108 |
hematopoietic cell | 8.97e-15 | 177 |
nongranular leukocyte | 1.20e-14 | 115 |
motile cell | 1.29e-14 | 386 |
leukocyte | 1.40e-14 | 136 |
multi fate stem cell | 2.93e-14 | 427 |
stem cell | 3.62e-14 | 441 |
somatic stem cell | 5.66e-14 | 433 |
hematopoietic stem cell | 6.57e-14 | 168 |
hematopoietic lineage restricted progenitor cell | 7.42e-14 | 120 |
hematopoietic oligopotent progenitor cell | 1.90e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.90e-13 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.41e-19 | 76 |
bone element | 3.54e-18 | 82 |
connective tissue | 1.16e-17 | 371 |
hematopoietic system | 1.18e-17 | 98 |
blood island | 1.18e-17 | 98 |
skeletal element | 6.13e-17 | 90 |
immune system | 7.59e-15 | 93 |
hemolymphoid system | 1.71e-14 | 108 |
skeletal system | 1.84e-14 | 100 |
musculoskeletal system | 3.30e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.18e-08 | 14 |