FFCP PHASE1:Hg19::chr5:58335535..58335548,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-193bp_to_ENST00000515011,uc003jru.2_5end | |association_with_transcript=-193bp_to_ENST00000515011,uc003jru.2_5end | ||
|cluster_id=chr5:58335535..58335548,- | |||
|coexpression_cluster_id=C22 | |coexpression_cluster_id=C22 | ||
|description=CAGE_peak_42_at_PDE4D_5end | |description=CAGE_peak_42_at_PDE4D_5end | ||
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|ontology_enrichment_celltype=CL:0000791!1.18e-16!18;CL:0000789!1.18e-16!18;CL:0002420!1.18e-16!18;CL:0002419!1.18e-16!18;CL:0000790!1.18e-16!18;CL:0000084!4.09e-12!25;CL:0000827!4.09e-12!25;CL:0000624!4.65e-10!6;CL:0000625!6.81e-10!11;CL:0000838!4.15e-07!52;CL:0000542!7.27e-07!53;CL:0000051!7.27e-07!53 | |ontology_enrichment_celltype=CL:0000791!1.18e-16!18;CL:0000789!1.18e-16!18;CL:0002420!1.18e-16!18;CL:0002419!1.18e-16!18;CL:0000790!1.18e-16!18;CL:0000084!4.09e-12!25;CL:0000827!4.09e-12!25;CL:0000624!4.65e-10!6;CL:0000625!6.81e-10!11;CL:0000838!4.15e-07!52;CL:0000542!7.27e-07!53;CL:0000051!7.27e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.78e-26;18!CL:0000789;3.78e-26;18!CL:0002419;3.78e-26;18!CL:0000624;4.87e-26;6!CL:0000623;1.02e-18;3!CL:0000226;1.56e-18;3!CL:0000842;1.56e-18;3!CL:0000084;2.10e-18;25!CL:0000784;8.16e-18;3!CL:0000898;3.33e-09;3!CL:0000625;6.56e-09;11!CL:0000542;1.14e-08;53!CL:0000895;1.27e-07;1 | |ontology_enrichment_celltype_v019=CL:0000791;3.78e-26;18!CL:0000789;3.78e-26;18!CL:0002419;3.78e-26;18!CL:0000624;4.87e-26;6!CL:0000623;1.02e-18;3!CL:0000226;1.56e-18;3!CL:0000842;1.56e-18;3!CL:0000084;2.10e-18;25!CL:0000784;8.16e-18;3!CL:0000898;3.33e-09;3!CL:0000625;6.56e-09;11!CL:0000542;1.14e-08;53!CL:0000895;1.27e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.57e-26,18;CL:0000789,3.57e-26,18;CL:0002420,3.57e-26,18;CL:0002419,3.57e-26,18;CL:0000790,3.57e-26,18;CL:0000624,4.20e-26,6;CL:0000623,7.60e-19,3;CL:0000825,7.60e-19,3;CL:0000226,1.56e-18,3;CL:0000842,1.56e-18,3;CL:0000084,2.02e-18,25;CL:0000827,2.02e-18,25;CL:0000784,4.29e-18,3;CL:0000738,1.47e-16,136;CL:0000838,1.45e-14,52;CL:0000542,3.03e-14,53;CL:0000051,3.03e-14,53;CL:0002087,5.15e-13,115;CL:0000037,1.49e-12,168;CL:0000988,1.10e-11,177;CL:0000898,2.96e-09,3;CL:0000625,6.71e-09,11;CL:0002031,3.91e-08,120;CL:0000810,1.36e-07,1;CL:0000895,1.36e-07,1;CL:0002436,1.36e-07,1;CL:0002427,1.36e-07,1;CL:0002428,1.36e-07,1;CL:0002429,1.36e-07,1;CL:0002433,1.36e-07,1;CL:0002431,1.36e-07,1;CL:0002432,1.36e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;3.78e-26;18!CL:0000051;1.14e-08;53!CL:0002427;1.27e-07;1 | |ontology_enrichment_development_v019=CL:0000790;3.78e-26;18!CL:0000051;1.14e-08;53!CL:0002427;1.27e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.01e-13;2!UBERON:0005058;8.01e-13;2!UBERON:0009113;8.01e-13;2 | |ontology_enrichment_uberon_v019=UBERON:0002370;8.01e-13;2!UBERON:0005058;8.01e-13;2!UBERON:0009113;8.01e-13;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.97e-14,4;UBERON:0005058,2.97e-14,4;UBERON:0009113,2.97e-14,4;UBERON:0003295,2.97e-14,4;UBERON:0005562,2.97e-14,4;UBERON:0003351,1.15e-09,6;UBERON:0009722,6.71e-09,11;UBERON:0007690,6.71e-09,11;UBERON:0004177,2.39e-08,7;UBERON:0005057,2.39e-08,7 | |||
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| ||
|short_description=p42@PDE4D | |short_description=p42@PDE4D | ||
}} | }} |
Latest revision as of 07:12, 18 September 2015
Short description: | p42@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_42_at_PDE4D_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | -193bp_to_ENST00000515011, uc003jru.2_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.97e-14 | 4 |
hemolymphoid system gland | 2.97e-14 | 4 |
thymic region | 2.97e-14 | 4 |
pharyngeal gland | 2.97e-14 | 4 |
thymus primordium | 2.97e-14 | 4 |
pharyngeal epithelium | 1.15e-09 | 6 |
entire pharyngeal arch endoderm | 6.71e-09 | 11 |
early pharyngeal endoderm | 6.71e-09 | 11 |
hemopoietic organ | 2.39e-08 | 7 |
immune organ | 2.39e-08 | 7 |