FFCP PHASE1:Hg19::chr3:4345063..4345087,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6419 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10762 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=75bp_to_uc003bpw.3,uc003bpy.3,uc011asq.1,uc011asr.1_5end | |||
|cluster_id=chr3:4345063..4345087,+ | |||
|description=CAGE_peak_2_at_SETMAR_5end | |||
|id=chr3:4345063..4345087,+ | |||
|ontology_enrichment_celltype=CL:0000542!9.54e-08!53;CL:0000051!9.54e-08!53;CL:0000838!1.57e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.35e-08,53;CL:0000051,9.35e-08,53;CL:0000838,1.55e-07,52;CL:0000037,3.10e-07,168 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.40e-08!51;DOID:0060083!2.40e-08!51;DOID:1240!3.05e-08!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.35e-08,39;DOID:2531,3.97e-08,51;DOID:0060083,3.97e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.35e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.28e-08,114 | |||
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| |||
|short_description=p2@SETMAR | |||
}} |
Latest revision as of 07:27, 18 September 2015
Short description: | p2@SETMAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SETMAR_5end |
Coexpression cluster: | NA |
Association with transcript: | 75bp_to_uc003bpw.3, uc003bpy.3, uc011asq.1, uc011asr.1_5end |
EntrezGene: | SETMAR |
HGNC: | 10762 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.35e-08 | 53 |
common lymphoid progenitor | 9.35e-08 | 53 |
lymphoid lineage restricted progenitor cell | 1.55e-07 | 52 |
hematopoietic stem cell | 3.10e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.28e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.35e-08 | 39 |
hematologic cancer | 3.97e-08 | 51 |
immune system cancer | 3.97e-08 | 51 |