FFCP PHASE1:Hg19::chr9:95820966..95821019,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=203328 | |EntrezGene=203328 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28391 | |HGNC=28391 | ||
|TSSclassifier=strong | |||
|UniProt=Q96L08 | |UniProt=Q96L08 | ||
|association_with_transcript=0bp_to_ENST00000375472,NM_145006,uc004atb.2,uc004atc.2_5end | |association_with_transcript=0bp_to_ENST00000375472,NM_145006,uc004atb.2,uc004atc.2_5end | ||
|cluster_id=chr9:95820966..95821019,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_SUSD3_5end | |description=CAGE_peak_1_at_SUSD3_5end | ||
|id=chr9:95820966..95821019,+ | |id=chr9:95820966..95821019,+ | ||
|ontology_enrichment_celltype=CL:0000037!3.97e-22!172;CL:0000566!3.97e-22!172;CL:0002032!3.37e-21!165;CL:0000837!3.37e-21!165;CL:0000738!5.74e-21!140;CL:0000988!1.51e-19!182;CL:0002087!3.35e-18!119;CL:0000542!5.11e-18!53;CL:0000051!5.11e-18!53;CL:0000838!1.21e-17!52;CL:0002031!1.54e-17!124;CL:0000945!1.34e-13!24;CL:0000826!1.34e-13!24;CL:0000791!3.61e-10!18;CL:0000789!3.61e-10!18;CL:0002420!3.61e-10!18;CL:0002419!3.61e-10!18;CL:0000790!3.61e-10!18;CL:0000236!2.19e-08!14;CL:0000625!2.28e-07!11;CL:0000763!5.36e-07!112;CL:0000049!5.36e-07!112;CL:0002320!7.39e-07!365;CL:0000134!8.37e-07!358 | |ontology_enrichment_celltype=CL:0000037!3.97e-22!172;CL:0000566!3.97e-22!172;CL:0002032!3.37e-21!165;CL:0000837!3.37e-21!165;CL:0000738!5.74e-21!140;CL:0000988!1.51e-19!182;CL:0002087!3.35e-18!119;CL:0000542!5.11e-18!53;CL:0000051!5.11e-18!53;CL:0000838!1.21e-17!52;CL:0002031!1.54e-17!124;CL:0000945!1.34e-13!24;CL:0000826!1.34e-13!24;CL:0000791!3.61e-10!18;CL:0000789!3.61e-10!18;CL:0002420!3.61e-10!18;CL:0002419!3.61e-10!18;CL:0000790!3.61e-10!18;CL:0000236!2.19e-08!14;CL:0000625!2.28e-07!11;CL:0000763!5.36e-07!112;CL:0000049!5.36e-07!112;CL:0002320!7.39e-07!365;CL:0000134!8.37e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.10e-14;24!CL:0000542;2.17e-11;53!CL:0000791;2.07e-10;18!CL:0000789;2.07e-10;18!CL:0002419;2.07e-10;18!CL:0000236;3.44e-08;13!CL:0000625;9.66e-08;11!CL:0002087;7.12e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.24e-26,168;CL:0002032,1.62e-25,161;CL:0000837,1.62e-25,161;CL:0000738,7.11e-25,136;CL:0000988,1.09e-23,177;CL:0002087,6.12e-22,115;CL:0002031,8.45e-21,120;CL:0000542,1.92e-19,53;CL:0000051,1.92e-19,53;CL:0000838,4.79e-19,52;CL:0000945,2.33e-14,24;CL:0000826,2.33e-14,24;CL:0000791,2.11e-10,18;CL:0000789,2.11e-10,18;CL:0002420,2.11e-10,18;CL:0002419,2.11e-10,18;CL:0000790,2.11e-10,18;CL:0000763,4.32e-09,108;CL:0000049,4.32e-09,108;CL:0000236,8.08e-09,14;CL:0000625,9.74e-08,11;CL:0000766,4.10e-07,72;CL:0002320,6.30e-07,361;CL:0000134,7.24e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;2.17e-11;53!CL:0000790;2.07e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.16e-08!102;UBERON:0003061!1.16e-08!102;UBERON:0002193!1.11e-07!112 | |ontology_enrichment_uberon=UBERON:0002390!1.16e-08!102;UBERON:0003061!1.16e-08!102;UBERON:0002193!1.11e-07!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.76e-10,98;UBERON:0003061,2.76e-10,98;UBERON:0002193,2.03e-09,108 | |||
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| ||
|short_description=p1@SUSD3 | |short_description=p1@SUSD3 | ||
}} | }} |
Latest revision as of 08:10, 18 September 2015
Short description: | p1@SUSD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SUSD3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000375472, NM_145006, uc004atb.2, uc004atc.2_5end |
EntrezGene: | SUSD3 |
HGNC: | 28391 |
UniProt: | Q96L08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.24e-26 | 168 |
hematopoietic oligopotent progenitor cell | 1.62e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.62e-25 | 161 |
leukocyte | 7.11e-25 | 136 |
hematopoietic cell | 1.09e-23 | 177 |
nongranular leukocyte | 6.12e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 8.45e-21 | 120 |
lymphocyte | 1.92e-19 | 53 |
common lymphoid progenitor | 1.92e-19 | 53 |
lymphoid lineage restricted progenitor cell | 4.79e-19 | 52 |
lymphocyte of B lineage | 2.33e-14 | 24 |
pro-B cell | 2.33e-14 | 24 |
mature alpha-beta T cell | 2.11e-10 | 18 |
alpha-beta T cell | 2.11e-10 | 18 |
immature T cell | 2.11e-10 | 18 |
mature T cell | 2.11e-10 | 18 |
immature alpha-beta T cell | 2.11e-10 | 18 |
myeloid cell | 4.32e-09 | 108 |
common myeloid progenitor | 4.32e-09 | 108 |
B cell | 8.08e-09 | 14 |
CD8-positive, alpha-beta T cell | 9.74e-08 | 11 |
myeloid leukocyte | 4.10e-07 | 72 |
connective tissue cell | 6.30e-07 | 361 |
mesenchymal cell | 7.24e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.76e-10 | 98 |
blood island | 2.76e-10 | 98 |
hemolymphoid system | 2.03e-09 | 108 |