FFCP PHASE1:Hg19::chr11:5710834..5710848,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:5710834..5710848,+
|short_description=p7@TRIM22
|description=CAGE_peak_7_at_TRIM22_5end
|association_with_transcript=17bp_to_NM_001199573,NM_006074_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10346 | |EntrezGene=10346 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16379 | |HGNC=16379 | ||
|UniProt=B4DQS5, | |TSSclassifier=strong | ||
|UniProt=B4DQS5,Q8IYM9 | |||
|association_with_transcript=17bp_to_NM_001199573,NM_006074_5end | |||
|cluster_id=chr11:5710834..5710848,+ | |||
|description=CAGE_peak_7_at_TRIM22_5end | |||
|id=chr11:5710834..5710848,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.72e-11!180;CL:0000192!5.88e-09!42;CL:0000514!5.88e-09!42;CL:0000187!7.58e-08!54;CL:0000680!8.35e-08!57;CL:0000056!8.35e-08!57;CL:0000355!8.35e-08!57;CL:0000359!2.35e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.82e-08;23!CL:1000306;1.93e-08;4!CL:0002547;1.93e-08;4!CL:0002580;2.60e-07;3!CL:0002504;7.36e-07;3!CL:1000279;7.36e-07;3!CL:1000280;7.36e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.74e-10,76;CL:0002620,1.51e-08,23;CL:1000306,1.84e-08,4;CL:0002547,1.84e-08,4;CL:0000192,3.52e-08,43;CL:0000514,3.52e-08,43;CL:0002580,1.86e-07,3;CL:0002504,9.31e-07,3;CL:1000279,9.31e-07,3;CL:1000280,9.31e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.62e-10;5!DOID:450;2.62e-10;5!DOID:66;2.62e-10;5!DOID:423;2.62e-10;5!DOID:0080000;2.62e-10;5!DOID:11722;2.62e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.74e-10,5;DOID:450,1.74e-10,5;DOID:66,1.74e-10,5;DOID:423,1.74e-10,5;DOID:0080000,1.74e-10,5;DOID:11722,1.74e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.02e-08!61;UBERON:0002036!3.02e-08!61;UBERON:0003082!3.02e-08!61;UBERON:0002385!1.43e-07!63;UBERON:0001015!1.43e-07!63;UBERON:0000383!1.43e-07!63;UBERON:0000914!3.17e-07!83;UBERON:0002329!3.17e-07!83;UBERON:0003077!3.17e-07!83;UBERON:0003059!3.17e-07!83;UBERON:0007282!3.17e-07!83;UBERON:0009618!3.17e-07!83;UBERON:0007285!3.17e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.93e-08;4!UBERON:0000415;1.93e-08;4!UBERON:0007240;1.93e-08;4!UBERON:0005742;1.93e-08;4!UBERON:0005734;1.93e-08;4!UBERON:0004664;1.93e-08;4!UBERON:0004663;1.93e-08;4!UBERON:0001135;2.44e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.84e-08,4;UBERON:0007240,1.84e-08,4;UBERON:0005742,1.84e-08,4;UBERON:0005734,1.84e-08,4;UBERON:0004664,1.84e-08,4;UBERON:0004663,1.84e-08,4;UBERON:0001135,2.00e-07,15 | |||
|phase1_expression=2.72517568905835,0.642301571672949,1.9733616573436,0,0.446961094427288,0,0,0,0,0.491467873003018,0,0,0,0,0,1.34465029290355,1.20538905604795,1.46062018077475,1.95173119516203,0,0,0,0.572471974262113,0.410623275218653,0.376627918784408,0.534893840235659,0.410502947249729,0.157421562627358,0.393364276848904,0,0,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,0,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0.263384084775077,0.196709770113833,0,0,1.67186495390678,0.651844533267181,0.473447805734733,0,0.557052284425868,0,0.443067789167242,1.08321545506006,0.128091319725675,0.910415432919148,0.164437904603676,0,0.289803085735052,0.741432815810302,1.07016331235885,1.04535523804977,0.339928028092699,0.766440987203842,0.68725489096526,0.759059076058509,0.637130828648193,1.30216690771284,0.950452044448374,0.301150238155546,0.639933055772092,0,0.473554504088034,0,0.604820229674197,0,0.289648807765598,0,0,0,1.0843174571537,0,0.434539556882471,0.795285947051099,0,0.945348171640679,1.10864698731282,0.614843499851882,0.196468613246569,0.364295288292542,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0,1.03366703667732,0.35576626268671,0.66944122552934,0,0.760272105718513,0,0,0,0.357198913136319,0,0,0,0,0,0,0,0,1.98788780678127,1.51956613997496,3.70745706277013,1.72101972449288,1.06400514659507,0,0,0.49333509683432,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,0,0,0.448346041655403,0,0,0,1.22492502752936,0,0.206651562351531,0,0,0,0,0,0,0.277064115484183,0.438977620880838,1.83892677479412,0.45071417671979,0.226864366320042,1.61450672119976,2.56268866582281,2.11931901159562,1.80054657650641,1.13357782162283,2.31876486041066,0.930584281657949,1.5189869901714,0.974370051611986,1.26216887122057,3.03764665519588,0.80823028409406,1.06502877754984,0.604512589365842,1.86516651541536,0.193260853163297,1.09098448236334,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0,1.3725424823882,0.329250856225877,0,0,0.555530670951178,0,0,0,0.927443239800615,1.17408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0.234004265139238,0,0,2.18376766658517,0.992425680696705,0.268675568108545,0.581267877027924,0,0.492663237895943,0.616339038092582,0,0,0,0,0,0,0,0.102827492703324,0,1.71495859578347,0,0.43596006883328,0.1466765716419,5.30014034606889,0,0,2.39344304926383,1.04007436911366,0,0,0,0.428933980974443,0,0,0.325736184293735,1.77695974371273,0.791951872933429,1.80863626235752,4.35766729300147,1.09970290300263,0,0,0,1.4377491329495,0,0,0.434343920002738,0,0.179060963239896,0,0.788123040807709,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,2.07970861530807,2.49800584316026,2.68094105557689,1.52283839490527,0.300946099727719,0,1.03473071292505,0,0.368738337083406,2.78027566297865,0.195801157462741,0,0,0,0,0,0,0,2.23297027036899,4.910783145218,1.68396056659844,1.92208723883551,0.511707249066704,1.76939313257968,0,0.308419387605311,0.177561725313127,0.246381468041427,0,0.232420756919918,0,1.00253235151642,0.276242966807689,0.803701137152247,1.0925470080403,1.83574180943194,0,0.539107359730903,0,0,1.68882606228601,0,0,0.215915916102139,0,0,0,0,0,0,0,0,3.07740150139667,0.984043937099117,6.83294628795036,0.206082023295445,0,0,0,0,1.6068392984416,0.48335359146061,0.154048617114644,0,0.275673144969061,0.322260734604821,0.145016693914229,0.0852266274161009,0.445160178233687,0,0,0.638063562472921,0.10115778085555,0.929691098594572,2.51849877464512,0,0,0.532306030317022,0.869932992075073,0.37064843820784,1.14499909393593,0.744316738719335,2.53103539774981,1.5250415513906,0,0,0,0,3.77732160924961,1.64722217841633,1.06031162111118,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0.818999468447914,1.41405431953713,0,0,1.32687795048244,0.438450885253763,0,0.655894752046633,1.82619339266434,0.30982349809975,0.845086807596724,1.86434757865267,3.34046739444612,0.7133421029625,0.354761064070598,0,0,0,0,0.384888450902048,0,0,0,0.43050537267123,0,0,0.689170200620878,0.507447609232169,0,0,0.952927101831156,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0.324621940274555,0.280797178113459,0,0,0,0.846458889008016,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.844501632511974,0.19924798825107,0.828851746593443,0,0.511343412510774,0.123084805461069,6.84287092855976,0.0898683511473268,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.384751292518985,0,0,0,0,0,0.915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0,0,0.802577647298789,0,0,0,0,0,0,0.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| ||
|short_description=p7@TRIM22 | |||
}} | }} |
Latest revision as of 09:01, 18 September 2015
Short description: | p7@TRIM22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TRIM22_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_NM_001199573, NM_006074_5end |
EntrezGene: | TRIM22 |
HGNC: | 16379 |
UniProt: | B4DQS5Q8IYM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.74e-10 | 76 |
skin fibroblast | 1.51e-08 | 23 |
fibroblast of tunica adventitia of artery | 1.84e-08 | 4 |
fibroblast of the aortic adventitia | 1.84e-08 | 4 |
smooth muscle cell | 3.52e-08 | 43 |
smooth muscle myoblast | 3.52e-08 | 43 |
preadipocyte of the breast | 1.86e-07 | 3 |
enteric smooth muscle cell | 9.31e-07 | 3 |
smooth muscle cell of large intestine | 9.31e-07 | 3 |
smooth muscle cell of colon | 9.31e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.84e-08 | 4 |
tunica adventitia of artery | 1.84e-08 | 4 |
adventitia | 1.84e-08 | 4 |
tunica adventitia of blood vessel | 1.84e-08 | 4 |
aorta tunica adventitia | 1.84e-08 | 4 |
aorta wall | 1.84e-08 | 4 |
smooth muscle tissue | 2.00e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.74e-10 | 5 |
myotonic disease | 1.74e-10 | 5 |
muscle tissue disease | 1.74e-10 | 5 |
myopathy | 1.74e-10 | 5 |
muscular disease | 1.74e-10 | 5 |
myotonic dystrophy | 1.74e-10 | 5 |