FFCP PHASE1:Hg19::chr1:16482507..16482514,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1969 | |EntrezGene=1969 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3386 | |HGNC=3386 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000461614_5end | |association_with_transcript=32bp_to_ENST00000461614_5end | ||
|cluster_id=chr1:16482507..16482514,- | |||
|coexpression_cluster_id=C3898 | |coexpression_cluster_id=C3898 | ||
|description=CAGE_peak_3_at_EPHA2_5end | |description=CAGE_peak_3_at_EPHA2_5end | ||
|id=chr1:16482507..16482514,- | |id=chr1:16482507..16482514,- | ||
|ontology_enrichment_celltype=CL:0000066!1.06e-40!254;CL:0002321!1.35e-16!248;CL:0000220!1.93e-16!246;CL:0002076!3.84e-12!43;CL:0000076!4.66e-12!62;CL:0000223!1.40e-10!59;CL:0002368!1.64e-09!13;CL:1000507!3.27e-07!12;CL:1000494!3.27e-07!12;CL:0002202!3.58e-07!9;CL:0002632!3.58e-07!9;CL:1000449!3.84e-07!16;CL:1000497!7.69e-07!18;CL:0002518!7.69e-07!18 | |ontology_enrichment_celltype=CL:0000066!1.06e-40!254;CL:0002321!1.35e-16!248;CL:0000220!1.93e-16!246;CL:0002076!3.84e-12!43;CL:0000076!4.66e-12!62;CL:0000223!1.40e-10!59;CL:0002368!1.64e-09!13;CL:1000507!3.27e-07!12;CL:1000494!3.27e-07!12;CL:0002202!3.58e-07!9;CL:0002632!3.58e-07!9;CL:1000449!3.84e-07!16;CL:1000497!7.69e-07!18;CL:0002518!7.69e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.75e-15;13!CL:0002202;1.30e-12;9!CL:0002632;1.30e-12;9!CL:0002076;8.36e-11;42!CL:1000497;3.72e-09;17!CL:0002518;3.72e-09;17!CL:1000507;4.24e-09;10!CL:1000494;4.24e-09;10!CL:1000449;7.40e-09;15!CL:0000244;3.35e-07;4!CL:0000731;3.35e-07;4!CL:0000307;6.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.04e-29,253;CL:0002368,8.38e-16,13;CL:0002076,4.82e-14,42;CL:0002202,9.81e-13,9;CL:0002632,9.81e-13,9;CL:0000223,2.62e-10,58;CL:0002321,3.36e-10,250;CL:1000497,1.20e-09,17;CL:0002518,1.20e-09,17;CL:1000507,1.42e-09,10;CL:1000494,1.42e-09,10;CL:1000449,2.73e-09,15;CL:0000076,6.89e-08,63;CL:0000244,1.28e-07,4;CL:0000731,1.28e-07,4;CL:0000068,6.75e-07,3;CL:0000069,6.75e-07,3;CL:0000307,6.75e-07,3;CL:0000377,6.75e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;6.32e-07;3 | |||
|ontology_enrichment_disease=DOID:305!1.77e-12!106;DOID:0050687!1.50e-09!143 | |ontology_enrichment_disease=DOID:305!1.77e-12!106;DOID:0050687!1.50e-09!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.11e-13!659;UBERON:0000467!2.38e-13!625;UBERON:0000480!3.77e-13!626;UBERON:0000119!1.37e-12!312;UBERON:0000483!3.67e-12!309;UBERON:0000481!6.58e-12!347;UBERON:0004119!1.21e-11!169;UBERON:0000925!1.21e-11!169;UBERON:0006595!1.21e-11!169;UBERON:0000922!3.01e-11!612;UBERON:0003104!9.16e-11!238;UBERON:0009142!9.16e-11!238;UBERON:0005177!9.27e-11!107;UBERON:0000475!1.55e-10!365;UBERON:0001048!3.18e-10!168;UBERON:0002050!3.21e-10!605;UBERON:0005423!3.21e-10!605;UBERON:0000923!5.57e-10!604;UBERON:0005291!5.57e-10!604;UBERON:0006598!5.57e-10!604;UBERON:0002532!5.57e-10!604;UBERON:0006554!6.86e-10!44;UBERON:0000466!1.36e-09!126;UBERON:0001008!2.49e-09!45;UBERON:0000062!4.07e-09!511;UBERON:0000477!4.69e-09!286;UBERON:0003914!5.35e-09!118;UBERON:0000464!6.24e-09!104;UBERON:0000064!2.08e-08!219;UBERON:0001007!2.50e-08!155;UBERON:0001555!2.50e-08!155;UBERON:0007026!2.50e-08!155;UBERON:0000077!4.13e-08!130;UBERON:0003064!9.82e-08!37;UBERON:0001444!1.87e-07!48;UBERON:0005085!1.92e-07!29;UBERON:0004111!1.97e-07!241;UBERON:0000058!2.05e-07!26;UBERON:0002100!2.47e-07!216;UBERON:0009773!3.27e-07!12;UBERON:0001231!3.27e-07!12;UBERON:0004810!3.27e-07!12;UBERON:0000970!3.63e-07!20;UBERON:0004211!3.84e-07!16;UBERON:0001285!3.84e-07!16;UBERON:0007684!3.84e-07!16;UBERON:0003220!3.84e-07!16;UBERON:0004208!3.84e-07!16;UBERON:0001041!4.64e-07!98;UBERON:0000019!6.00e-07!19;UBERON:0000047!6.00e-07!19;UBERON:0004088!6.00e-07!19;UBERON:0003072!6.00e-07!19;UBERON:0003071!6.00e-07!19;UBERON:0004128!6.00e-07!19;UBERON:0000080!6.64e-07!18;UBERON:0002120!6.64e-07!18;UBERON:0004875!6.64e-07!18;UBERON:0005721!6.64e-07!18;UBERON:0005754!6.64e-07!18;UBERON:0007297!6.64e-07!18;UBERON:0006555!6.95e-07!17;UBERON:0005103!6.95e-07!17;UBERON:0000083!6.95e-07!17;UBERON:0009201!6.95e-07!17;UBERON:0004819!6.95e-07!17;UBERON:0006553!6.95e-07!17;UBERON:0003074!6.95e-07!17;UBERON:0003060!6.95e-07!17;UBERON:0000020!7.25e-07!23;UBERON:0004921!8.20e-07!129;UBERON:0004185!8.20e-07!129 | |ontology_enrichment_uberon=UBERON:0000468!1.11e-13!659;UBERON:0000467!2.38e-13!625;UBERON:0000480!3.77e-13!626;UBERON:0000119!1.37e-12!312;UBERON:0000483!3.67e-12!309;UBERON:0000481!6.58e-12!347;UBERON:0004119!1.21e-11!169;UBERON:0000925!1.21e-11!169;UBERON:0006595!1.21e-11!169;UBERON:0000922!3.01e-11!612;UBERON:0003104!9.16e-11!238;UBERON:0009142!9.16e-11!238;UBERON:0005177!9.27e-11!107;UBERON:0000475!1.55e-10!365;UBERON:0001048!3.18e-10!168;UBERON:0002050!3.21e-10!605;UBERON:0005423!3.21e-10!605;UBERON:0000923!5.57e-10!604;UBERON:0005291!5.57e-10!604;UBERON:0006598!5.57e-10!604;UBERON:0002532!5.57e-10!604;UBERON:0006554!6.86e-10!44;UBERON:0000466!1.36e-09!126;UBERON:0001008!2.49e-09!45;UBERON:0000062!4.07e-09!511;UBERON:0000477!4.69e-09!286;UBERON:0003914!5.35e-09!118;UBERON:0000464!6.24e-09!104;UBERON:0000064!2.08e-08!219;UBERON:0001007!2.50e-08!155;UBERON:0001555!2.50e-08!155;UBERON:0007026!2.50e-08!155;UBERON:0000077!4.13e-08!130;UBERON:0003064!9.82e-08!37;UBERON:0001444!1.87e-07!48;UBERON:0005085!1.92e-07!29;UBERON:0004111!1.97e-07!241;UBERON:0000058!2.05e-07!26;UBERON:0002100!2.47e-07!216;UBERON:0009773!3.27e-07!12;UBERON:0001231!3.27e-07!12;UBERON:0004810!3.27e-07!12;UBERON:0000970!3.63e-07!20;UBERON:0004211!3.84e-07!16;UBERON:0001285!3.84e-07!16;UBERON:0007684!3.84e-07!16;UBERON:0003220!3.84e-07!16;UBERON:0004208!3.84e-07!16;UBERON:0001041!4.64e-07!98;UBERON:0000019!6.00e-07!19;UBERON:0000047!6.00e-07!19;UBERON:0004088!6.00e-07!19;UBERON:0003072!6.00e-07!19;UBERON:0003071!6.00e-07!19;UBERON:0004128!6.00e-07!19;UBERON:0000080!6.64e-07!18;UBERON:0002120!6.64e-07!18;UBERON:0004875!6.64e-07!18;UBERON:0005721!6.64e-07!18;UBERON:0005754!6.64e-07!18;UBERON:0007297!6.64e-07!18;UBERON:0006555!6.95e-07!17;UBERON:0005103!6.95e-07!17;UBERON:0000083!6.95e-07!17;UBERON:0009201!6.95e-07!17;UBERON:0004819!6.95e-07!17;UBERON:0006553!6.95e-07!17;UBERON:0003074!6.95e-07!17;UBERON:0003060!6.95e-07!17;UBERON:0000020!7.25e-07!23;UBERON:0004921!8.20e-07!129;UBERON:0004185!8.20e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.02e-12;30!UBERON:0001008;1.02e-12;30!UBERON:0001801;1.08e-10;14!UBERON:0000019;2.31e-10;19!UBERON:0000047;2.31e-10;19!UBERON:0004088;2.31e-10;19!UBERON:0010230;2.31e-10;19!UBERON:0000970;1.09e-09;20!UBERON:0005910;1.60e-09;6!UBERON:0004211;4.24e-09;10!UBERON:0009773;4.24e-09;10!UBERON:0001231;4.24e-09;10!UBERON:0004810;4.24e-09;10!UBERON:0002104;4.41e-09;21!UBERON:0001456;4.41e-09;21!UBERON:0006555;7.40e-09;15!UBERON:0004819;7.40e-09;15!UBERON:0001285;7.40e-09;15!UBERON:0007684;7.40e-09;15!UBERON:0007196;1.98e-08;15!UBERON:0001558;1.98e-08;15!UBERON:0000365;2.32e-08;5!UBERON:0002113;3.39e-08;24!UBERON:0011143;3.39e-08;24!UBERON:0000020;4.96e-08;23!UBERON:0001032;1.42e-07;24!UBERON:0004456;1.42e-07;24!UBERON:0000489;2.32e-07;29!UBERON:0000486;2.33e-07;12 | |||
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| ||
|short_description=p3@EPHA2 | |short_description=p3@EPHA2 | ||
}} | }} |
Latest revision as of 09:34, 18 September 2015
Short description: | p3@EPHA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EPHA2_5end |
Coexpression cluster: | C3898_Alveolar_immature_serous_Bronchial_Tracheal_Keratinocyte_embryonic |
Association with transcript: | 32bp_to_ENST00000461614_5end |
EntrezGene: | EPHA2 |
HGNC: | 3386 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.04e-29 | 253 |
respiratory epithelial cell | 8.38e-16 | 13 |
endo-epithelial cell | 4.82e-14 | 42 |
epithelial cell of tracheobronchial tree | 9.81e-13 | 9 |
epithelial cell of lower respiratory tract | 9.81e-13 | 9 |
endodermal cell | 2.62e-10 | 58 |
embryonic cell | 3.36e-10 | 250 |
kidney cell | 1.20e-09 | 17 |
kidney epithelial cell | 1.20e-09 | 17 |
kidney tubule cell | 1.42e-09 | 10 |
nephron tubule epithelial cell | 1.42e-09 | 10 |
epithelial cell of nephron | 2.73e-09 | 15 |
squamous epithelial cell | 6.89e-08 | 63 |
transitional epithelial cell | 1.28e-07 | 4 |
urothelial cell | 1.28e-07 | 4 |
duct epithelial cell | 6.75e-07 | 3 |
branched duct epithelial cell | 6.75e-07 | 3 |
tracheal epithelial cell | 6.75e-07 | 3 |
tracheoblast | 6.75e-07 | 3 |