FFCP PHASE1:Hg19::chr1:47489240..47489254,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=260293 | |EntrezGene=260293 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20244 | |HGNC=20244 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N118,Q5VVE5 | |UniProt=Q8N118,Q5VVE5 | ||
|association_with_transcript=0bp_to_ENST00000371901,NM_178033,uc001cqt.2_5end | |association_with_transcript=0bp_to_ENST00000371901,NM_178033,uc001cqt.2_5end | ||
|cluster_id=chr1:47489240..47489254,+ | |||
|description=CAGE_peak_2_at_CYP4X1_5end | |description=CAGE_peak_2_at_CYP4X1_5end | ||
|id=chr1:47489240..47489254,+ | |id=chr1:47489240..47489254,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.93e-16!24;CL:0000071!2.60e-10!18;CL:0002546!2.60e-10!18;CL:0000115!3.17e-09!35;CL:0005020!2.80e-08!6;CL:0002138!2.80e-08!6;CL:0005022!2.80e-08!6;CL:0002078!5.97e-08!44;CL:1000413!9.92e-08!9 | |ontology_enrichment_celltype=CL:0002139!1.93e-16!24;CL:0000071!2.60e-10!18;CL:0002546!2.60e-10!18;CL:0000115!3.17e-09!35;CL:0005020!2.80e-08!6;CL:0002138!2.80e-08!6;CL:0005022!2.80e-08!6;CL:0002078!5.97e-08!44;CL:1000413!9.92e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.48e-13;24!CL:0002138;4.81e-10;6!CL:0002549;6.92e-09;2!CL:0000115;7.02e-07;36 | |ontology_enrichment_celltype_v019=CL:0002139;3.48e-13;24!CL:0002138;4.81e-10;6!CL:0002549;6.92e-09;2!CL:0000115;7.02e-07;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.09e-13,24;CL:0005020,4.50e-10,6;CL:0002138,4.50e-10,6;CL:0005022,4.50e-10,6;CL:0002549,6.81e-09,2;CL:0000115,4.99e-08,36;CL:0002078,2.18e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;4.81e-10;6!UBERON:0006965;2.28e-08;2 | |ontology_enrichment_development_v019=CL:0005022;4.81e-10;6!UBERON:0006965;2.28e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.98e-27!115;UBERON:0000477!5.26e-19!286;UBERON:0004111!9.01e-16!241;UBERON:0002049!2.06e-13!79;UBERON:0007798!2.06e-13!79;UBERON:0001017!3.38e-13!82;UBERON:0005743!5.02e-13!86;UBERON:0000119!6.29e-13!312;UBERON:0001009!3.74e-12!113;UBERON:0000153!4.48e-12!129;UBERON:0007811!4.48e-12!129;UBERON:0000483!7.72e-12!309;UBERON:0004535!1.52e-11!110;UBERON:0002616!2.09e-11!59;UBERON:0000955!3.95e-11!69;UBERON:0006238!3.95e-11!69;UBERON:0000468!6.97e-11!659;UBERON:0000025!7.76e-11!194;UBERON:0003075!8.23e-11!86;UBERON:0007284!8.23e-11!86;UBERON:0000073!1.23e-10!94;UBERON:0001016!1.23e-10!94;UBERON:0000033!1.31e-10!123;UBERON:0002346!1.86e-10!90;UBERON:0001986!2.60e-10!18;UBERON:0004638!2.60e-10!18;UBERON:0004852!2.60e-10!18;UBERON:0001049!3.58e-09!57;UBERON:0005068!3.58e-09!57;UBERON:0006241!3.58e-09!57;UBERON:0007135!3.58e-09!57;UBERON:0000922!3.91e-09!612;UBERON:0000467!4.90e-09!625;UBERON:0000480!5.91e-09!626;UBERON:0006914!9.72e-09!25;UBERON:0004121!1.01e-08!169;UBERON:0000924!1.33e-08!173;UBERON:0006601!1.33e-08!173;UBERON:0000055!2.04e-08!69;UBERON:0002200!8.68e-08!11;UBERON:0006876!8.68e-08!11;UBERON:0003915!9.92e-08!9;UBERON:0004700!9.92e-08!9;UBERON:0001917!9.92e-08!9;UBERON:0000487!1.07e-07!22;UBERON:0000923!2.08e-07!604;UBERON:0005291!2.08e-07!604;UBERON:0006598!2.08e-07!604;UBERON:0002532!2.08e-07!604;UBERON:0002050!2.46e-07!605;UBERON:0005423!2.46e-07!605;UBERON:0000481!4.20e-07!347;UBERON:0002619!4.44e-07!22;UBERON:0001893!4.74e-07!34;UBERON:0001950!5.67e-07!20;UBERON:0001869!7.86e-07!32;UBERON:0002020!8.74e-07!34;UBERON:0003528!8.74e-07!34 | |ontology_enrichment_uberon=UBERON:0007023!2.98e-27!115;UBERON:0000477!5.26e-19!286;UBERON:0004111!9.01e-16!241;UBERON:0002049!2.06e-13!79;UBERON:0007798!2.06e-13!79;UBERON:0001017!3.38e-13!82;UBERON:0005743!5.02e-13!86;UBERON:0000119!6.29e-13!312;UBERON:0001009!3.74e-12!113;UBERON:0000153!4.48e-12!129;UBERON:0007811!4.48e-12!129;UBERON:0000483!7.72e-12!309;UBERON:0004535!1.52e-11!110;UBERON:0002616!2.09e-11!59;UBERON:0000955!3.95e-11!69;UBERON:0006238!3.95e-11!69;UBERON:0000468!6.97e-11!659;UBERON:0000025!7.76e-11!194;UBERON:0003075!8.23e-11!86;UBERON:0007284!8.23e-11!86;UBERON:0000073!1.23e-10!94;UBERON:0001016!1.23e-10!94;UBERON:0000033!1.31e-10!123;UBERON:0002346!1.86e-10!90;UBERON:0001986!2.60e-10!18;UBERON:0004638!2.60e-10!18;UBERON:0004852!2.60e-10!18;UBERON:0001049!3.58e-09!57;UBERON:0005068!3.58e-09!57;UBERON:0006241!3.58e-09!57;UBERON:0007135!3.58e-09!57;UBERON:0000922!3.91e-09!612;UBERON:0000467!4.90e-09!625;UBERON:0000480!5.91e-09!626;UBERON:0006914!9.72e-09!25;UBERON:0004121!1.01e-08!169;UBERON:0000924!1.33e-08!173;UBERON:0006601!1.33e-08!173;UBERON:0000055!2.04e-08!69;UBERON:0002200!8.68e-08!11;UBERON:0006876!8.68e-08!11;UBERON:0003915!9.92e-08!9;UBERON:0004700!9.92e-08!9;UBERON:0001917!9.92e-08!9;UBERON:0000487!1.07e-07!22;UBERON:0000923!2.08e-07!604;UBERON:0005291!2.08e-07!604;UBERON:0006598!2.08e-07!604;UBERON:0002532!2.08e-07!604;UBERON:0002050!2.46e-07!605;UBERON:0005423!2.46e-07!605;UBERON:0000481!4.20e-07!347;UBERON:0002619!4.44e-07!22;UBERON:0001893!4.74e-07!34;UBERON:0001950!5.67e-07!20;UBERON:0001869!7.86e-07!32;UBERON:0002020!8.74e-07!34;UBERON:0003528!8.74e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;6.92e-09;2!UBERON:0005358;6.92e-09;2!UBERON:0001886;6.92e-09;2!UBERON:0004086;6.92e-09;2!UBERON:0005282;6.92e-09;2!UBERON:0005281;6.92e-09;2!UBERON:0003127;7.75e-09;2!UBERON:0000341;2.12e-08;2!UBERON:0002360;8.75e-08;2!UBERON:0000094;8.75e-08;2!UBERON:0010743;8.75e-08;2!UBERON:0001473;1.56e-07;8!UBERON:0004536;1.56e-07;8!UBERON:0006558;1.56e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0005629;6.92e-09;2!UBERON:0005358;6.92e-09;2!UBERON:0001886;6.92e-09;2!UBERON:0004086;6.92e-09;2!UBERON:0005282;6.92e-09;2!UBERON:0005281;6.92e-09;2!UBERON:0003127;7.75e-09;2!UBERON:0000341;2.12e-08;2!UBERON:0002360;8.75e-08;2!UBERON:0000094;8.75e-08;2!UBERON:0010743;8.75e-08;2!UBERON:0001473;1.56e-07;8!UBERON:0004536;1.56e-07;8!UBERON:0006558;1.56e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.19e-13,78;UBERON:0007798,2.19e-13,78;UBERON:0004535,1.26e-11,109;UBERON:0001009,3.63e-11,112;UBERON:0000055,1.17e-09,68;UBERON:0005629,6.81e-09,2;UBERON:0005358,6.81e-09,2;UBERON:0001886,6.81e-09,2;UBERON:0004086,6.81e-09,2;UBERON:0005282,6.81e-09,2;UBERON:0005281,6.81e-09,2;UBERON:0003127,7.35e-09,2;UBERON:0000341,1.44e-08,2;UBERON:0002360,6.39e-08,2;UBERON:0000094,6.39e-08,2;UBERON:0010743,6.39e-08,2;UBERON:0001473,1.48e-07,8;UBERON:0004536,1.48e-07,8;UBERON:0006558,1.48e-07,8 | |||
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| ||
|short_description=p2@CYP4X1 | |short_description=p2@CYP4X1 | ||
}} | }} |
Latest revision as of 09:37, 18 September 2015
Short description: | p2@CYP4X1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CYP4X1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000371901, NM_178033, uc001cqt.2_5end |
EntrezGene: | CYP4X1 |
HGNC: | 20244 |
UniProt: | Q8N118Q5VVE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.09e-13 | 24 |
lymphangioblast | 4.50e-10 | 6 |
endothelial cell of lymphatic vessel | 4.50e-10 | 6 |
vascular lymphangioblast | 4.50e-10 | 6 |
fibroblast of choroid plexus | 6.81e-09 | 2 |
endothelial cell | 4.99e-08 | 36 |
meso-epithelial cell | 2.18e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.19e-13 | 78 |
vascular system | 2.19e-13 | 78 |
cardiovascular system | 1.26e-11 | 109 |
circulatory system | 3.63e-11 | 112 |
vessel | 1.17e-09 | 68 |
vascular plexus | 6.81e-09 | 2 |
ventricle of nervous system | 6.81e-09 | 2 |
choroid plexus | 6.81e-09 | 2 |
brain ventricle | 6.81e-09 | 2 |
ventricular system of brain | 6.81e-09 | 2 |
ventricular system of central nervous system | 6.81e-09 | 2 |
open tracheal system trachea | 7.35e-09 | 2 |
throat | 1.44e-08 | 2 |
meninx | 6.39e-08 | 2 |
membrane organ | 6.39e-08 | 2 |
meningeal cluster | 6.39e-08 | 2 |
lymphatic vessel | 1.48e-07 | 8 |
lymph vasculature | 1.48e-07 | 8 |
lymphatic part of lymphoid system | 1.48e-07 | 8 |