FFCP PHASE1:Hg19::chr17:79919713..79919720,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147111 | |EntrezGene=147111 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27106 | |HGNC=27106 | ||
|TSSclassifier=strong | |||
|UniProt=C9JYG8 | |UniProt=C9JYG8 | ||
|association_with_transcript=0bp_to_ENST00000425009_5end | |association_with_transcript=0bp_to_ENST00000425009_5end | ||
|cluster_id=chr17:79919713..79919720,- | |||
|coexpression_cluster_id=C3699 | |||
|description=CAGE_peak_5_at_NOTUM_5end | |description=CAGE_peak_5_at_NOTUM_5end | ||
|id=chr17:79919713..79919720,- | |id=chr17:79919713..79919720,- | ||
|ontology_enrichment_celltype=CL:0002541!5.03e-11!3 | |ontology_enrichment_celltype=CL:0002541!5.03e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;4.06e-25;3!CL:0000182;4.52e-14;12!CL:0002253;2.17e-10;2!CL:0000349;3.62e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.82e-25,3;CL:0000182,4.52e-14,12;CL:0002253,2.27e-10,2;CL:0000349,3.52e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.74e-15;11!UBERON:0009497;4.85e-13;13!UBERON:0001041;5.73e-10;30!UBERON:0003104;1.57e-09;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;1.30e-19;1!DOID:1357;1.30e-19;1!DOID:3119;2.95e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.30e-19,1;DOID:1357,1.30e-19,1;DOID:3119,3.07e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0000476!5.03e-11!3;UBERON:0000920!5.03e-11!3;UBERON:0001049!5.45e-10!57;UBERON:0005068!5.45e-10!57;UBERON:0006241!5.45e-10!57;UBERON:0007135!5.45e-10!57;UBERON:0002616!1.55e-09!59;UBERON:0000955!1.04e-08!69;UBERON:0006238!1.04e-08!69;UBERON:0001893!1.80e-08!34;UBERON:0005631!2.53e-08!14;UBERON:0000158!2.53e-08!14;UBERON:0001950!3.19e-08!20;UBERON:0003124!4.30e-08!7;UBERON:0002780!4.35e-08!41;UBERON:0001890!4.35e-08!41;UBERON:0006240!4.35e-08!41;UBERON:0003080!7.65e-08!42;UBERON:0007023!1.07e-07!115;UBERON:0001869!1.49e-07!32;UBERON:0002619!2.14e-07!22;UBERON:0002791!3.72e-07!33;UBERON:0001017!8.78e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.06e-25;3!UBERON:0000920;4.06e-25;3!UBERON:0001764;1.30e-19;1!UBERON:0001825;1.30e-19;1!UBERON:0005631;7.69e-17;10!UBERON:0000158;7.69e-17;10!UBERON:0002107;4.05e-09;19!UBERON:0006925;4.05e-09;19!UBERON:0000478;2.25e-07;24!UBERON:0002423;4.60e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.82e-25,3;UBERON:0001764,1.30e-19,1;UBERON:0001825,1.30e-19,1;UBERON:0005631,3.07e-12,14;UBERON:0000158,3.07e-12,14;UBERON:0003124,2.30e-11,7;UBERON:0002107,4.05e-09,19;UBERON:0006925,4.05e-09,19;UBERON:0008836,4.05e-09,19;UBERON:0008835,5.93e-08,22;UBERON:0003894,5.93e-08,22;UBERON:0009854,1.24e-07,23;UBERON:0000478,2.20e-07,24;UBERON:0007499,4.60e-07,25;UBERON:0009497,4.60e-07,25;UBERON:0000015,4.60e-07,25;UBERON:0002423,4.60e-07,25;UBERON:0006235,4.60e-07,25;UBERON:0004161,4.60e-07,25;UBERON:0009856,8.20e-07,26 | |||
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| ||
|short_description=p5@NOTUM | |short_description=p5@NOTUM | ||
}} | }} |
Latest revision as of 09:58, 18 September 2015
Short description: | p5@NOTUM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NOTUM_5end |
Coexpression cluster: | C3699_small_chorionic_Saos2_maxillary_hepatocellular_amniotic_colon |
Association with transcript: | 0bp_to_ENST00000425009_5end |
EntrezGene: | NOTUM |
HGNC: | 27106 |
UniProt: | C9JYG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.82e-25 | 3 |
hepatocyte | 4.52e-14 | 12 |
epithelial cell of large intestine | 2.27e-10 | 2 |
extraembryonic cell | 3.52e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.82e-25 | 3 |
maxillary sinus | 1.30e-19 | 1 |
paranasal sinus | 1.30e-19 | 1 |
extraembryonic membrane | 3.07e-12 | 14 |
membranous layer | 3.07e-12 | 14 |
chorion | 2.30e-11 | 7 |
liver | 4.05e-09 | 19 |
digestive gland | 4.05e-09 | 19 |
liver bud | 4.05e-09 | 19 |
hepatic diverticulum | 5.93e-08 | 22 |
liver primordium | 5.93e-08 | 22 |
digestive tract diverticulum | 1.24e-07 | 23 |
extraembryonic structure | 2.20e-07 | 24 |
epithelial sac | 4.60e-07 | 25 |
epithelium of foregut-midgut junction | 4.60e-07 | 25 |
anatomical boundary | 4.60e-07 | 25 |
hepatobiliary system | 4.60e-07 | 25 |
foregut-midgut junction | 4.60e-07 | 25 |
septum transversum | 4.60e-07 | 25 |
sac | 8.20e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.30e-19 | 1 |
maxillary sinus cancer | 1.30e-19 | 1 |
gastrointestinal system cancer | 3.07e-12 | 14 |