FFCP PHASE1:Hg19::chr12:46663812..46663851,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81539 | |EntrezGene=81539 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13447 | |HGNC=13447 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000546519_5end | |association_with_transcript=-12bp_to_ENST00000546519_5end | ||
|cluster_id=chr12:46663812..46663851,- | |||
|description=CAGE_peak_19_at_SLC38A1_5end | |description=CAGE_peak_19_at_SLC38A1_5end | ||
|id=chr12:46663812..46663851,- | |id=chr12:46663812..46663851,- | ||
|ontology_enrichment_celltype=CL:0000542!1.09e-25!53;CL:0000051!1.09e-25!53;CL:0000838!8.84e-25!52;CL:0000791!1.05e-15!18;CL:0000789!1.05e-15!18;CL:0002420!1.05e-15!18;CL:0002419!1.05e-15!18;CL:0000790!1.05e-15!18;CL:0000084!1.15e-15!25;CL:0000827!1.15e-15!25;CL:0000625!3.01e-10!11;CL:0000945!1.46e-08!24;CL:0000826!1.46e-08!24;CL:0002087!8.81e-08!119;CL:0000738!6.23e-07!140;CL:0000080!9.68e-07!6 | |ontology_enrichment_celltype=CL:0000542!1.09e-25!53;CL:0000051!1.09e-25!53;CL:0000838!8.84e-25!52;CL:0000791!1.05e-15!18;CL:0000789!1.05e-15!18;CL:0002420!1.05e-15!18;CL:0002419!1.05e-15!18;CL:0000790!1.05e-15!18;CL:0000084!1.15e-15!25;CL:0000827!1.15e-15!25;CL:0000625!3.01e-10!11;CL:0000945!1.46e-08!24;CL:0000826!1.46e-08!24;CL:0002087!8.81e-08!119;CL:0000738!6.23e-07!140;CL:0000080!9.68e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.29e-27;18!CL:0000789;4.29e-27;18!CL:0002419;4.29e-27;18!CL:0000625;1.31e-25;11!CL:0000084;4.77e-22;25!CL:0000542;3.94e-14;53!CL:0000945;6.11e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.34e-28,53;CL:0000051,1.34e-28,53;CL:0000791,5.11e-27,18;CL:0000789,5.11e-27,18;CL:0002420,5.11e-27,18;CL:0002419,5.11e-27,18;CL:0000790,5.11e-27,18;CL:0000838,1.56e-26,52;CL:0000625,1.20e-25,11;CL:0000084,4.08e-22,25;CL:0000827,4.08e-22,25;CL:0000988,3.22e-12,177;CL:0002087,4.38e-10,115;CL:0000738,1.11e-09,136;CL:0000037,2.73e-09,168;CL:0002031,1.86e-08,120;CL:0002032,3.95e-08,161;CL:0000837,3.95e-08,161;CL:0000945,4.78e-07,24;CL:0000826,4.78e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;4.29e-27;18!CL:0000051;3.94e-14;53 | |||
|ontology_enrichment_disease=DOID:0060058!5.40e-08!10 | |ontology_enrichment_disease=DOID:0060058!5.40e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:5409;5.38e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,6.93e-09,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81404456212093,6.07544361929599,6.76912719297642,0,0.383829398097213,0,0,0,0,0.46480320348181,0.284338464974843,0,0,0,0.651032612147555,0,0.971680998056939,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0.889509253863555,0.426730222566507,0.800791974072025,0,1.98313461835459,0,0,0,0,0,0.560508562981536,0,1.180258620683,2.35806457649499,0.822405995998037,0.501559486172034,2.60737813306872,1.89379122293893,1.94826728407911,0.445641827540694,0.294605907474837,0.221533894583621,0.270803863765016,0.384273959177026,0.260118695119756,0.493313713811028,0.552700035571697,0.289803085735052,1.77943875794473,1.87278579662799,1.04535523804977,0.453237370790265,0.383220493601921,1.03088233644789,0.253019692019503,1.59282707162048,1.95325036156926,3.8018081777935,1.05402583354441,1.02389288923535,0,1.89421801635213,3.28451198768419,0.604820229674197,1.33720097891754,2.60683926989038,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.0654895377488563,0,0.741568885568859,0.324547393654683,0,0,0.476981248610684,1.14398982156026,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0.760272105718513,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0.365921118388786,0.795178609928912,0.813357600086629,0.414644220061482,1.00928340350251,1.45990943630332,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,3.97316789473185,0,0,0.109750285408626,0,0.603173834469785,0.0925884451585296,0,0,1.44331342025273,0,0,0.288732895522148,0,0,0,0.858486162094873,0,0,0,0,0,0,0.626909658919938,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.985153801009636,1.07813787429759,0.385029108839245,0,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0.902399225814824,0.462092022626489,0,1.46139224653261,0.527758144464379,0,0,0,1.54227252690289,0,1.00337954770971,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0.476463550915578,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0,1.30062222588003,0,0,1.91311527274587,0.399158742865633,0.383010740264733,1.05836791361941,0,0,0,0,0,1.35433422241283,0,0,0,0,0,0,0,0,1.9488432172667,0,0,0,0,0.18714054040822,0,0.485442086998054,0.891547074219827,0,0,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0,0.738508832766417,0,1.16828856491525,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.349839999984783,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0.10893846351899,0,0,0,0.69169171316418,0.897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,3.58696709697646,0,0.424059214301822,6.92443647174692,0,0.0884575645033392,0,1.48260564340311,1.85345908419754,1.25306339406546,0.134802265961354,0,0,3.64909578431332,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0.664653872707185,0.330991955875499,0,0,0.569219092059585,0,0,0,0.435296032902013,0.34945333648406,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0.343609788497747,0,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,2.37085329784197,0,0.136203406111576,0.964518890790115,0.687697182986169,1.24632101408756,0,0,0.0607495566580247,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,1.48849806543585,0.395223263795889,0.487170393523584,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.0620964029413835,0,0.37494122388632,0,0,0,0,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0.265729680626726,0.327130788511688,0,0,0,0.39997479170986,0,0,0,0,0,0,1.66262682694747,0,0,0.218419276384028,0,0,0,0,0,1.57723490002507,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0.0679697329768317,0.131545547125698,0,0.556157009460346,0.078493092850514,0.157115589916002,0.560544326627578,0,0.431855182437243,0.47775168788705,0,0,1.27865567904938,0.347716544605159,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.111855431797792,0.98150233615243,0.853425474875886,0,0,0,0,0.467878926924211,0,1.18920090777569,0,8.13559823916176,1.35866559210006,0,0.218559560503957,0.940634592723046,0,0.235676547101626,0.196308467114945,0,0,0,0.187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| ||
|short_description=p19@SLC38A1 | |short_description=p19@SLC38A1 | ||
}} | }} |
Latest revision as of 10:56, 18 September 2015
Short description: | p19@SLC38A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SLC38A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000546519_5end |
EntrezGene: | SLC38A1 |
HGNC: | 13447 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.34e-28 | 53 |
common lymphoid progenitor | 1.34e-28 | 53 |
mature alpha-beta T cell | 5.11e-27 | 18 |
alpha-beta T cell | 5.11e-27 | 18 |
immature T cell | 5.11e-27 | 18 |
mature T cell | 5.11e-27 | 18 |
immature alpha-beta T cell | 5.11e-27 | 18 |
lymphoid lineage restricted progenitor cell | 1.56e-26 | 52 |
CD8-positive, alpha-beta T cell | 1.20e-25 | 11 |
T cell | 4.08e-22 | 25 |
pro-T cell | 4.08e-22 | 25 |
hematopoietic cell | 3.22e-12 | 177 |
nongranular leukocyte | 4.38e-10 | 115 |
leukocyte | 1.11e-09 | 136 |
hematopoietic stem cell | 2.73e-09 | 168 |
hematopoietic lineage restricted progenitor cell | 1.86e-08 | 120 |
hematopoietic oligopotent progenitor cell | 3.95e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.95e-08 | 161 |
lymphocyte of B lineage | 4.78e-07 | 24 |
pro-B cell | 4.78e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 6.93e-09 | 4 |