FFCP PHASE1:Hg19::chr9:98279241..98279259,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5727 | |EntrezGene=5727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9585 | |HGNC=9585 | ||
|TSSclassifier=strong | |||
|UniProt=Q13635,F5H3A7,Q59FG5 | |UniProt=Q13635,F5H3A7,Q59FG5 | ||
|association_with_transcript=0bp_to_ENST00000375274,ENST00000437951,ENST00000544247,NM_001083602,NM_001083603,uc004avm.3,uc004avo.2,uc010mrr.2,uc010mrv.1,uc010mrw.1_5end | |association_with_transcript=0bp_to_ENST00000375274,ENST00000437951,ENST00000544247,NM_001083602,NM_001083603,uc004avm.3,uc004avo.2,uc010mrr.2,uc010mrv.1,uc010mrw.1_5end | ||
|cluster_id=chr9:98279241..98279259,- | |||
|description=CAGE_peak_6_at_PTCH1_5end | |description=CAGE_peak_6_at_PTCH1_5end | ||
|id=chr9:98279241..98279259,- | |id=chr9:98279241..98279259,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1036;7.51e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,7.32e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.71e-29!115;UBERON:0001049!1.63e-19!57;UBERON:0005068!1.63e-19!57;UBERON:0006241!1.63e-19!57;UBERON:0007135!1.63e-19!57;UBERON:0003075!2.88e-19!86;UBERON:0007284!2.88e-19!86;UBERON:0002346!5.55e-19!90;UBERON:0001017!6.67e-17!82;UBERON:0000955!1.79e-16!69;UBERON:0006238!1.79e-16!69;UBERON:0005743!3.04e-16!86;UBERON:0000073!5.10e-16!94;UBERON:0001016!5.10e-16!94;UBERON:0002616!9.79e-16!59;UBERON:0002780!3.20e-15!41;UBERON:0001890!3.20e-15!41;UBERON:0006240!3.20e-15!41;UBERON:0003080!1.49e-14!42;UBERON:0002020!1.73e-14!34;UBERON:0003528!1.73e-14!34;UBERON:0001893!2.81e-14!34;UBERON:0002791!1.15e-13!33;UBERON:0001869!3.31e-13!32;UBERON:0003056!6.08e-12!61;UBERON:0000153!1.62e-11!129;UBERON:0007811!1.62e-11!129;UBERON:0000033!3.94e-11!123;UBERON:0001950!9.77e-11!20;UBERON:0002619!1.11e-10!22;UBERON:0000924!2.80e-10!173;UBERON:0006601!2.80e-10!173;UBERON:0004121!3.28e-10!169;UBERON:0000956!3.68e-10!25;UBERON:0000203!3.68e-10!25;UBERON:0000059!7.92e-07!11 | |ontology_enrichment_uberon=UBERON:0007023!8.71e-29!115;UBERON:0001049!1.63e-19!57;UBERON:0005068!1.63e-19!57;UBERON:0006241!1.63e-19!57;UBERON:0007135!1.63e-19!57;UBERON:0003075!2.88e-19!86;UBERON:0007284!2.88e-19!86;UBERON:0002346!5.55e-19!90;UBERON:0001017!6.67e-17!82;UBERON:0000955!1.79e-16!69;UBERON:0006238!1.79e-16!69;UBERON:0005743!3.04e-16!86;UBERON:0000073!5.10e-16!94;UBERON:0001016!5.10e-16!94;UBERON:0002616!9.79e-16!59;UBERON:0002780!3.20e-15!41;UBERON:0001890!3.20e-15!41;UBERON:0006240!3.20e-15!41;UBERON:0003080!1.49e-14!42;UBERON:0002020!1.73e-14!34;UBERON:0003528!1.73e-14!34;UBERON:0001893!2.81e-14!34;UBERON:0002791!1.15e-13!33;UBERON:0001869!3.31e-13!32;UBERON:0003056!6.08e-12!61;UBERON:0000153!1.62e-11!129;UBERON:0007811!1.62e-11!129;UBERON:0000033!3.94e-11!123;UBERON:0001950!9.77e-11!20;UBERON:0002619!1.11e-10!22;UBERON:0000924!2.80e-10!173;UBERON:0006601!2.80e-10!173;UBERON:0004121!3.28e-10!169;UBERON:0000956!3.68e-10!25;UBERON:0000203!3.68e-10!25;UBERON:0000059!7.92e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0004907;1.31e-11;5!UBERON:0000160;5.94e-11;17!UBERON:0000059;1.21e-10;11!UBERON:0005409;2.28e-10;22!UBERON:0002619;7.29e-10;22!UBERON:0003528;1.72e-09;34!UBERON:0002020;1.72e-09;34!UBERON:0001052;7.15e-09;4!UBERON:0001950;1.08e-08;20!UBERON:0000956;1.55e-08;25!UBERON:0000203;1.55e-08;25!UBERON:0002791;3.25e-08;32!UBERON:0001869;3.63e-08;32!UBERON:0000073;2.27e-07;53!UBERON:0002616;2.27e-07;53!UBERON:0002771;2.53e-07;2!UBERON:0004921;4.93e-07;33!UBERON:0001893;9.46e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004907,1.45e-11,5;UBERON:0007023,3.26e-11,114;UBERON:0000160,5.34e-11,17;UBERON:0000059,1.03e-10,11;UBERON:0001049,1.19e-10,56;UBERON:0005068,1.19e-10,56;UBERON:0006241,1.19e-10,56;UBERON:0007135,1.19e-10,56;UBERON:0003075,1.77e-10,82;UBERON:0007284,1.77e-10,82;UBERON:0003528,1.87e-10,34;UBERON:0002020,1.87e-10,34;UBERON:0011216,6.14e-10,223;UBERON:0002619,8.07e-10,22;UBERON:0000073,8.11e-10,53;UBERON:0002616,8.11e-10,53;UBERON:0002346,8.80e-10,86;UBERON:0002791,1.91e-09,32;UBERON:0001869,1.91e-09,32;UBERON:0000955,4.18e-09,68;UBERON:0006238,4.18e-09,68;UBERON:0001016,4.20e-09,89;UBERON:0005409,5.04e-09,25;UBERON:0001052,7.20e-09,4;UBERON:0001893,8.84e-09,34;UBERON:0001950,1.41e-08,20;UBERON:0000956,1.69e-08,25;UBERON:0000203,1.69e-08,25;UBERON:0010371,2.83e-08,104;UBERON:0001017,3.34e-08,81;UBERON:0002780,5.84e-07,41;UBERON:0001890,5.84e-07,41;UBERON:0003080,5.84e-07,41;UBERON:0006240,5.84e-07,41;UBERON:0003056,6.20e-07,61;UBERON:0002771,6.64e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0.893922188854576,0,0,0,0,0.245733936501509,0,0,0,0.37129905888014,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0.14828656316206,0,0,0.113309342697566,0,0,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.639933055772092,0,0.236777252044017,0,0,0.802320587350522,0.144824403882799,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0,0,0.087834785693126,0.785874452986276,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0.302714855289863,0,0,0,0,0,0.117434498643765,0.485618833104395,0.280901613404497,0.204154171254893,0,0.516628905878827,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0.646584227275248,0,0,0.169560592310488,0,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0,0.25248486685276,0.063497894292169,0.763976851116555,1.17217447210047,0,0.308482478109971,0.600686115687835,1.71495859578347,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.394061520403854,0.431255149719035,0.256686072559497,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0,0,0,0,0,1.03473071292505,0.664225598535437,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.412164046590889,6.50143200210238,6.35323149388527,0,0,0,0,0.154048617114644,0.307007349452259,0.137836572484531,0.322260734604821,0.435050081742686,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,1.46290121726877,0,0,0.9554993798559,0.141405431953713,1.13008116620243,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,1.13841952129715,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0.764637207142375,0,0.476463550915578,0,0,0.540031437238115,1.58625035258854,0.213648142254946,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0.970884173996107,0,0,0,0,0,0.994147647766298,1.96937182974718,0.111308705022906,0,0,0,1.38141957765574,4.28285671352269,0.20453736500431,0,0,0,0,0,0.295930216910801,0,0,1.93866549219044,0.463840490809256,0,0,0,0,0.227586896570999,0,0,0.344743373241465,0,0.694499979733169,0,0.964771509003264,0,2.87506075821184,1.47773809476774,0.658156191461918,0,0,1.07730361905316,0,0,0,0,0,0.0915975934018623,0,0,0,0,2.03036094555463,1.56850027454192,2.51732380463764,1.3282761290693,0,0,0,0,4.760550074326,0.995261931078505,1.41532103205343,1.83309043480088,0.296521128680622,0.370691816839509,0.417687798021821,0.471807930864739,0.802577647298789,0.468528891450678,0,0,0.242780379534093,0,0,0.91821828489147,0.31593289814244,0,0.311064574191741,0,0,0,0,0,0,0,0,0.174118413160805,0.34945333648406,0,0,0.365446585430928,0.164230914106418,0.0969890164884194,0.264768380074501,2.25980740780532,0.274083849293502,0,0.50648636764703,0.195551382734803,0,1.28071796843612,0,0,0.572682980829578,1.54435498075768,0,0,0,0.135904206073614,0,0.305994652908965,0,1.20084057741958,0.958337652243951,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0.223171457441873,0.268733889946905,0,0,0,0,0.0674035438541849,0.295282444544246,0,0,1.90684768556206,0,0,0,0,0,1.21499113316049,0,0.236417121897595,0.734364233889974,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,0,1.0342636508924,0.92562821219883,0,0,0.427149650270779,7.54580664478397,2.89967338743037,0,0.197611631897944,0,0,0,0,0,0,1.88464915500281,0,1.09823638411767,0.876336514945499,0,0.998361463831671,1.4903136705932,0.276697269872462,0,0.303298235083296,0,0,0.936669811613763,1.44921028610825,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0.385239660814607,0,0.260994291965212,0,0,0,0,0.926404341482917,0,0,0,0,0,0.345430341731199,0,1.10606748921385,0,0,0,0.327609848846413,0,0,0,1.38699248602383,0,0,0,0,0.62207726003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| ||
|short_description=p6@PTCH1 | |short_description=p6@PTCH1 | ||
}} | }} |
Latest revision as of 11:00, 18 September 2015
Short description: | p6@PTCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PTCH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000375274, ENST00000437951, ENST00000544247, NM_001083602, NM_001083603, uc004avm.3, uc004avo.2, uc010mrr.2, uc010mrv.1, uc010mrw.1_5end |
EntrezGene: | PTCH1 |
HGNC: | 9585 |
UniProt: | Q13635F5H3A7Q59FG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower digestive tract | 1.45e-11 | 5 |
adult organism | 3.26e-11 | 114 |
intestine | 5.34e-11 | 17 |
large intestine | 1.03e-10 | 11 |
neural tube | 1.19e-10 | 56 |
neural rod | 1.19e-10 | 56 |
future spinal cord | 1.19e-10 | 56 |
neural keel | 1.19e-10 | 56 |
neural plate | 1.77e-10 | 82 |
presumptive neural plate | 1.77e-10 | 82 |
brain grey matter | 1.87e-10 | 34 |
gray matter | 1.87e-10 | 34 |
organ system subdivision | 6.14e-10 | 223 |
regional part of cerebral cortex | 8.07e-10 | 22 |
regional part of nervous system | 8.11e-10 | 53 |
regional part of brain | 8.11e-10 | 53 |
neurectoderm | 8.80e-10 | 86 |
regional part of telencephalon | 1.91e-09 | 32 |
cerebral hemisphere | 1.91e-09 | 32 |
brain | 4.18e-09 | 68 |
future brain | 4.18e-09 | 68 |
nervous system | 4.20e-09 | 89 |
gastrointestinal system | 5.04e-09 | 25 |
rectum | 7.20e-09 | 4 |
telencephalon | 8.84e-09 | 34 |
neocortex | 1.41e-08 | 20 |
cerebral cortex | 1.69e-08 | 25 |
pallium | 1.69e-08 | 25 |
ecto-epithelium | 2.83e-08 | 104 |
central nervous system | 3.34e-08 | 81 |
regional part of forebrain | 5.84e-07 | 41 |
forebrain | 5.84e-07 | 41 |
anterior neural tube | 5.84e-07 | 41 |
future forebrain | 5.84e-07 | 41 |
pre-chordal neural plate | 6.20e-07 | 61 |
middle temporal gyrus | 6.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 7.32e-07 | 8 |