FFCP PHASE1:Hg19::chr12:47473339..47473356,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:47473339..47473356,+ to FFCP PHASE1:Hg19::chr12:47473339..47473356,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91523 | |EntrezGene=91523 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28255 | |HGNC=28255 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_ENST00000546455,uc001rpn.2_5end | |||
|cluster_id=chr12:47473339..47473356,+ | |||
|description=CAGE_peak_4_at_FAM113B_5end | |||
|id=chr12:47473339..47473356,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.79e-07!18;CL:0000789!2.79e-07!18;CL:0002420!2.79e-07!18;CL:0002419!2.79e-07!18;CL:0000790!2.79e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.98e-08;18!CL:0000789;3.98e-08;18!CL:0002419;3.98e-08;18!CL:1000507;1.80e-07;10!CL:1000494;1.80e-07;10!CL:0000244;7.01e-07;4!CL:0000731;7.01e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.23e-08,18;CL:0000789,1.23e-08,18;CL:0002420,1.23e-08,18;CL:0002419,1.23e-08,18;CL:0000790,1.23e-08,18;CL:1000507,1.62e-07,10;CL:1000494,1.62e-07,10;CL:0000244,4.91e-07,4;CL:0000731,4.91e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000790;3.98e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.39e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.29e-10,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.80e-07;10!UBERON:0009773;1.80e-07;10!UBERON:0001231;1.80e-07;10!UBERON:0004810;1.80e-07;10!UBERON:0002118;7.43e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.62e-07,10;UBERON:0002118,2.54e-07,5 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.704772020479856,2.00146596706261,0,0,0,0,0.522371256399677,0.491467873003018,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0,0,1.46062018077475,1.95173119516203,0.246242116153576,0.408001382488506,0,0.286235987131057,0,0.251085279189606,0,0,0,0.393364276848904,1.53531759238885,0.309632246632152,0.919421224478927,1.50602959389125,1.84877005083394,0,0,0,0,0.200544447470142,0,0.671746422719773,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0.612167784741805,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0.300353785683013,0.16072558669708,0,0.19891667719909,0,1.75996244461323,0.546138611262131,0.889509253863555,0.426730222566507,0.800791974072025,1.72425731986345,0.661044872784862,0,0,0,1.14681968437569,0,0,0,1.37696839079683,1.17903228824749,1.64481199199607,0.668745981562712,1.62961133316795,2.36723902867367,0,0.445641827540694,0.294605907474837,0.886135578334485,1.08321545506006,0.512365278902701,0.260118695119756,1.47994114143309,0.276350017785848,0.289803085735052,1.03800594213442,0.535081656179426,0,0.679856056185397,1.14966148080576,1.71813722741315,1.01207876807801,1.27426165729639,0.651083453856419,1.90090408889675,0.451725357233318,0.895906278080929,1.24930726552346,1.4206635122641,1.64225599384209,4.23374160771938,0.534880391567015,1.88271725047639,0,0.670700859703636,0.383587685530591,0,0,0,0,0,0.472674085820339,0.443458794925128,0.614843499851882,0.261958150995425,2.18577172975525,1.48313777113772,0.649094787309367,0.174129737299267,0.26591592103773,1.19245312152671,0,2.22874500797739,0.198762407366705,1.72046919021225,0,1.13061588384802,1.25849830862972,0.550236083880135,0.417989933073621,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0.44905874525234,0.563057402416611,0,0,0.183201743930407,1.31780417436063,0,3.48875241714027,0.993943903390637,1.01304409331664,1.45650098894541,0.286836620748814,0.709336764396714,0,0,1.2333377420858,0.311211035399766,1.34710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0,0,0.247266929278557,1.82032272387605,0,0.168336113954066,0,0,1.31693286264251,1.22595118319608,0.150238058906597,0.680593098960126,0.538168907066586,0.640672166455702,0.635795703478686,2.10063767259082,1.13357782162283,1.8034837803194,0.744467425326359,1.0126579934476,0.292311015483596,0.757301322732344,0.920498986422993,0.484938170456436,0.710019185033229,0.403008392910561,0.67824236924195,1.54608682530637,2.18196896472668,1.14721838155602,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.674338760312407,0.241011029883482,0.330881918197182,0.871517776369625,0,0.134831308160164,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.514703430895577,1.64625428112938,1.1240175325762,1.20634766893957,2.12953423864618,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0.790204397959275,2.57545848628462,0.246217006087397,0.234004265139238,0,0,1.00789276919316,0.850650583454319,0.716468181622786,1.16253575405585,1.15014803749563,0.492663237895943,0,1.65862492432618,2.16179930125442,2.14612136824846,0,0,0,0,0,0,0,0,0.43596006883328,0.1466765716419,1.29271715757778,0,0,0.797814349754612,2.08014873822732,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0.904318131178758,0,0.699810938274399,0,0,0,0.718874566474748,0,0,0.289562613335158,0.205476322550383,0.716243852959582,0.224170287987055,3.15249216323084,1.94064817373566,1.54011643535698,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0.207970861530807,0.535286966391485,0.473107245101804,0.35142424497814,0,0,1.03473071292505,0.664225598535437,0.368738337083406,0.173767228936166,0.587403472388222,0,0.82707210449155,0.431428401637234,1.921096040462,0,0,0.30239029332968,0,2.30192959932094,0.280660094433074,0.512556597022804,1.02341449813341,2.2519548960105,1.48418066444991,0.308419387605311,0,0,0.519254429183621,0.116210378459959,0,0.802025881213139,0.828728900423067,0.574072240823034,0.182091168006717,0.262248829918848,1.35359883872224,0.462092022626489,1.56869953835371,1.46139224653261,1.05551628892876,0,0,1.0795795805107,0,0.270946437543853,1.50506932156456,1.52925763827023,2.49322802678617,1.11937377361089,0,0,0.256450125116389,0.656029291399411,0.650756789328606,0.103041011647722,0.366277859273374,0.165018999841176,1.14853107599234,1.95018073810956,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0,0.178064071293475,1.65284915360978,2.69066094311149,5.35973392477253,1.0115778085555,0.929691098594572,0.94443704049192,0.6970372701606,0.616067160352178,0,0,0.37064843820784,1.00187420719394,0.744316738719335,0.316379424718726,0.190630193923825,0.255897791311334,0,0,1.56989728039846,0.179872457583315,0,0.471249609382746,1.01091240786658,0,0.421258456238981,0,0.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| ||
|short_description=p4@FAM113B | |||
}} | }} |
Latest revision as of 12:07, 18 September 2015
Short description: | p4@FAM113B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM113B_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000546455, uc001rpn.2_5end |
EntrezGene: | FAM113B |
HGNC: | 28255 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.23e-08 | 18 |
alpha-beta T cell | 1.23e-08 | 18 |
immature T cell | 1.23e-08 | 18 |
mature T cell | 1.23e-08 | 18 |
immature alpha-beta T cell | 1.23e-08 | 18 |
kidney tubule cell | 1.62e-07 | 10 |
nephron tubule epithelial cell | 1.62e-07 | 10 |
transitional epithelial cell | 4.91e-07 | 4 |
urothelial cell | 4.91e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.62e-07 | 10 |
right ovary | 2.54e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.29e-10 | 14 |