FFCP PHASE1:Hg19::chr3:47205402..47205411,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29072 | |EntrezGene=29072 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18420 | |HGNC=18420 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=55bp_to_uc003cqv.2_5end | |association_with_transcript=55bp_to_uc003cqv.2_5end | ||
|cluster_id=chr3:47205402..47205411,- | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_11_at_SETD2_5end | |description=CAGE_peak_11_at_SETD2_5end | ||
|id=chr3:47205402..47205411,- | |id=chr3:47205402..47205411,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000784;8.93e-37;3!CL:0002032;5.06e-13;1!CL:0000557;5.06e-13;1!CL:0000451;1.71e-10;10!CL:0000039;1.33e-07;7!CL:0000586;1.33e-07;7!CL:0000047;3.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,8.98e-37,3;CL:0000451,1.71e-10,10;CL:0000039,1.25e-07,7;CL:0000586,1.25e-07,7;CL:0000047,9.38e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.97e-07!82;UBERON:0000073!3.20e-07!94;UBERON:0001016!3.20e-07!94;UBERON:0005743!8.08e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.63e-07;49!UBERON:0000473;9.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.85e-07,8 | |||
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| ||
|short_description=p11@SETD2 | |short_description=p11@SETD2 | ||
}} | }} |
Latest revision as of 12:19, 18 September 2015
Short description: | p11@SETD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SETD2_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 55bp_to_uc003cqv.2_5end |
EntrezGene: | SETD2 |
HGNC: | 18420 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 8.98e-37 | 3 |
dendritic cell | 1.71e-10 | 10 |
germ line cell | 1.25e-07 | 7 |
germ cell | 1.25e-07 | 7 |
neuronal stem cell | 9.38e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 8.85e-07 | 8 |