FFCP PHASE1:Hg19::chr8:55471773..55471782,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6101 | |EntrezGene=6101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=10263 | |HGNC=10263 | ||
|TSSclassifier=strong | |||
|UniProt=E7EVW9 | |UniProt=E7EVW9 | ||
|association_with_transcript=44bp_to_ENST00000427058_5end | |association_with_transcript=44bp_to_ENST00000427058_5end | ||
|cluster_id=chr8:55471773..55471782,+ | |||
|coexpression_cluster_id=C131 | |coexpression_cluster_id=C131 | ||
|description=CAGE_peak_4_at_RP1_5end | |description=CAGE_peak_4_at_RP1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002563!1.46e-08!4 | |ontology_enrichment_celltype=CL:0002563!1.46e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002577;1.30e-08;3 | |ontology_enrichment_celltype_v019=CL:0002577;1.30e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.21e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.72e-19;29!UBERON:0006965;2.90e-12;2!UBERON:0001041;3.06e-12;30 | |ontology_enrichment_development_v019=UBERON:0008947;2.72e-19;29!UBERON:0006965;2.90e-12;2!UBERON:0001041;3.06e-12;30 | ||
|ontology_enrichment_disease=DOID:3908!4.43e-07!5 | |ontology_enrichment_disease=DOID:3908!4.43e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:4556;1.30e-08;3 | |ontology_enrichment_disease_v019=DOID:4556;1.30e-08;3 | ||
|ontology_enrichment_disease_v019_2=DOID:4556,1.51e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000341!5.76e-17!2;UBERON:0003127!7.30e-17!2;UBERON:0005178!1.25e-10!34;UBERON:0002224!1.25e-10!34;UBERON:0005181!2.66e-10!35;UBERON:0002171!1.89e-09!1;UBERON:0006518!1.89e-09!1;UBERON:0008949!1.89e-09!1;UBERON:0000101!1.89e-09!1;UBERON:0002167!1.89e-09!1;UBERON:0008947!2.01e-09!38;UBERON:0003258!2.01e-09!38;UBERON:0002048!7.38e-09!22;UBERON:0000117!7.38e-09!22;UBERON:0000171!7.38e-09!22;UBERON:0000170!7.38e-09!22;UBERON:0005597!7.38e-09!22;UBERON:0000118!7.38e-09!22;UBERON:0000915!1.27e-08!52;UBERON:0001242!1.46e-08!4;UBERON:0001262!1.46e-08!4;UBERON:0004786!1.46e-08!4;UBERON:0004808!1.46e-08!4;UBERON:0001277!1.46e-08!4;UBERON:0005153!3.53e-07!37;UBERON:0003350!5.15e-07!5 | |ontology_enrichment_uberon=UBERON:0000341!5.76e-17!2;UBERON:0003127!7.30e-17!2;UBERON:0005178!1.25e-10!34;UBERON:0002224!1.25e-10!34;UBERON:0005181!2.66e-10!35;UBERON:0002171!1.89e-09!1;UBERON:0006518!1.89e-09!1;UBERON:0008949!1.89e-09!1;UBERON:0000101!1.89e-09!1;UBERON:0002167!1.89e-09!1;UBERON:0008947!2.01e-09!38;UBERON:0003258!2.01e-09!38;UBERON:0002048!7.38e-09!22;UBERON:0000117!7.38e-09!22;UBERON:0000171!7.38e-09!22;UBERON:0000170!7.38e-09!22;UBERON:0005597!7.38e-09!22;UBERON:0000118!7.38e-09!22;UBERON:0000915!1.27e-08!52;UBERON:0001242!1.46e-08!4;UBERON:0001262!1.46e-08!4;UBERON:0004786!1.46e-08!4;UBERON:0004808!1.46e-08!4;UBERON:0001277!1.46e-08!4;UBERON:0005153!3.53e-07!37;UBERON:0003350!5.15e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;2.39e-44;2!UBERON:0002171;1.67e-23;1!UBERON:0006518;1.67e-23;1!UBERON:0008949;1.67e-23;1!UBERON:0000101;1.67e-23;1!UBERON:0002167;1.67e-23;1!UBERON:0002048;1.57e-16;22!UBERON:0000117;1.57e-16;22!UBERON:0000171;1.57e-16;22!UBERON:0000170;1.57e-16;22!UBERON:0000974;1.52e-15;6!UBERON:0005178;3.67e-14;34!UBERON:0002224;3.67e-14;34!UBERON:0003127;1.85e-12;2!UBERON:0005181;6.69e-11;35!UBERON:0000065;1.01e-09;44!UBERON:0000915;2.13e-07;52!UBERON:0001987;9.10e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000341;2.39e-44;2!UBERON:0002171;1.67e-23;1!UBERON:0006518;1.67e-23;1!UBERON:0008949;1.67e-23;1!UBERON:0000101;1.67e-23;1!UBERON:0002167;1.67e-23;1!UBERON:0002048;1.57e-16;22!UBERON:0000117;1.57e-16;22!UBERON:0000171;1.57e-16;22!UBERON:0000170;1.57e-16;22!UBERON:0000974;1.52e-15;6!UBERON:0005178;3.67e-14;34!UBERON:0002224;3.67e-14;34!UBERON:0003127;1.85e-12;2!UBERON:0005181;6.69e-11;35!UBERON:0000065;1.01e-09;44!UBERON:0000915;2.13e-07;52!UBERON:0001987;9.10e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,1.53e-44,2;UBERON:0002171,1.67e-23,1;UBERON:0006518,1.67e-23,1;UBERON:0008949,1.67e-23,1;UBERON:0000101,1.67e-23,1;UBERON:0002167,1.67e-23,1;UBERON:0002048,1.77e-16,22;UBERON:0000117,1.77e-16,22;UBERON:0000171,1.77e-16,22;UBERON:0000170,1.77e-16,22;UBERON:0005597,1.77e-16,22;UBERON:0000118,1.77e-16,22;UBERON:0005178,1.82e-16,34;UBERON:0002224,1.82e-16,34;UBERON:0005181,5.28e-16,35;UBERON:0008947,9.28e-15,38;UBERON:0003258,9.28e-15,38;UBERON:0003127,1.65e-12,2;UBERON:0000915,7.73e-11,52;UBERON:0000065,1.92e-10,54;UBERON:0005153,5.73e-10,37;UBERON:0000974,9.24e-10,10;UBERON:0005157,6.39e-08,47;UBERON:0001004,1.19e-07,74;UBERON:0001987,8.61e-07,4;UBERON:0004340,8.61e-07,4 | |||
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|short_description=p4@RP1 | |short_description=p4@RP1 | ||
}} | }} |
Latest revision as of 12:45, 18 September 2015
Short description: | p4@RP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RP1_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | 44bp_to_ENST00000427058_5end |
EntrezGene: | RP1 |
HGNC: | 10263 |
UniProt: | E7EVW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
throat | 1.53e-44 | 2 |
lower lobe of right lung | 1.67e-23 | 1 |
right lung lobe | 1.67e-23 | 1 |
lower lobe of lung | 1.67e-23 | 1 |
lobe of lung | 1.67e-23 | 1 |
right lung | 1.67e-23 | 1 |
lung | 1.77e-16 | 22 |
respiratory tube | 1.77e-16 | 22 |
respiration organ | 1.77e-16 | 22 |
pair of lungs | 1.77e-16 | 22 |
lung primordium | 1.77e-16 | 22 |
lung bud | 1.77e-16 | 22 |
thoracic cavity element | 1.82e-16 | 34 |
thoracic cavity | 1.82e-16 | 34 |
thoracic segment organ | 5.28e-16 | 35 |
respiratory primordium | 9.28e-15 | 38 |
endoderm of foregut | 9.28e-15 | 38 |
open tracheal system trachea | 1.65e-12 | 2 |
thoracic segment of trunk | 7.73e-11 | 52 |
respiratory tract | 1.92e-10 | 54 |
epithelial bud | 5.73e-10 | 37 |
neck | 9.24e-10 | 10 |
epithelial fold | 6.39e-08 | 47 |
respiratory system | 1.19e-07 | 74 |
placenta | 8.61e-07 | 4 |
allantois | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.51e-08 | 3 |