FFCP PHASE1:Hg19::chr16:89988312..89988354,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10381 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20772 | |||
|TSSclassifier=strong | |||
|UniProt=G3V542 | |||
|association_with_transcript=0bp_to_ENST00000556565_5end | |||
|cluster_id=chr16:89988312..89988354,+ | |||
|description=CAGE_peak_2_at_TUBB3_5end | |||
|id=chr16:89988312..89988354,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.16e-39!180;CL:0000222!1.64e-32!119;CL:0000220!2.90e-28!246;CL:0002321!5.68e-28!248;CL:0000183!1.14e-21!59;CL:0000548!1.01e-20!679;CL:0000004!1.01e-20!679;CL:0000255!1.01e-20!679;CL:0000012!4.71e-20!682;CL:0000187!4.47e-19!54;CL:0000680!8.36e-19!57;CL:0000056!8.36e-19!57;CL:0000355!8.36e-19!57;CL:0000393!3.04e-18!60;CL:0000211!3.04e-18!60;CL:0000144!3.70e-17!625;CL:0000192!3.69e-15!42;CL:0000514!3.69e-15!42;CL:0002371!1.02e-14!591;CL:0000057!1.94e-14!75;CL:0000213!7.55e-13!57;CL:0000215!7.55e-13!57;CL:0000003!1.00e-12!722;CL:0000359!1.74e-11!32;CL:0002078!1.03e-09!44;CL:0000115!6.77e-09!35;CL:0000066!1.51e-08!254;CL:0000071!5.49e-08!18;CL:0002546!5.49e-08!18;CL:0002139!1.53e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000187;1.43e-12;55!CL:0000192;2.17e-12;43!CL:0000359;6.71e-12;32!CL:0000393;1.13e-10;61!CL:0000211;1.13e-10;61!CL:0000115;1.12e-08;36!CL:0000071;1.59e-08;18!CL:0000213;1.88e-08;58!CL:0000215;1.88e-08;58!CL:0002139;5.86e-08;24!CL:0002078;6.26e-07;45!CL:1000449;7.25e-07;15!CL:0000057;9.72e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.97e-36,121;CL:0002321,1.02e-24,250;CL:0000187,3.07e-21,55;CL:0000680,6.01e-21,58;CL:0000056,6.01e-21,58;CL:0000355,6.01e-21,58;CL:0000393,9.01e-20,61;CL:0000211,9.01e-20,61;CL:0000192,7.99e-17,43;CL:0000514,7.99e-17,43;CL:0000057,2.13e-15,76;CL:0000213,1.66e-14,58;CL:0000215,1.66e-14,58;CL:0000359,2.58e-12,32;CL:0002078,9.88e-11,45;CL:0000115,1.32e-10,36;CL:0000071,8.56e-09,18;CL:0002546,8.56e-09,18;CL:0002139,2.70e-08,24;CL:1000449,5.37e-07,15;CL:0002494,6.50e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;2.17e-12;43!CL:0000355;8.24e-12;58!CL:0000222;2.61e-10;121!CL:0002546;1.59e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!6.29e-23!79;UBERON:0007798!6.29e-23!79;UBERON:0003914!4.57e-21!118;UBERON:0000119!7.22e-20!312;UBERON:0000483!3.45e-19!309;UBERON:0004535!7.26e-19!110;UBERON:0000055!8.09e-19!69;UBERON:0004872!1.68e-18!84;UBERON:0001009!4.36e-18!113;UBERON:0001981!6.51e-18!60;UBERON:0007500!6.51e-18!60;UBERON:0004537!6.51e-18!60;UBERON:0006965!6.51e-18!60;UBERON:0005256!2.99e-17!143;UBERON:0000914!7.94e-17!83;UBERON:0002329!7.94e-17!83;UBERON:0003077!7.94e-17!83;UBERON:0003059!7.94e-17!83;UBERON:0007282!7.94e-17!83;UBERON:0009618!7.94e-17!83;UBERON:0007285!7.94e-17!83;UBERON:0000490!1.38e-16!138;UBERON:0004290!1.42e-16!70;UBERON:0002100!1.60e-16!216;UBERON:0001637!6.31e-16!42;UBERON:0003509!6.31e-16!42;UBERON:0004572!6.31e-16!42;UBERON:0000475!1.77e-15!365;UBERON:0001134!2.01e-15!61;UBERON:0002036!2.01e-15!61;UBERON:0003082!2.01e-15!61;UBERON:0000486!2.62e-15!82;UBERON:0002385!2.79e-14!63;UBERON:0001015!2.79e-14!63;UBERON:0000383!2.79e-14!63;UBERON:0000477!3.47e-14!286;UBERON:0000025!2.08e-13!194;UBERON:0004111!9.23e-13!241;UBERON:0000481!3.01e-12!347;UBERON:0004573!9.58e-12!33;UBERON:0004571!9.58e-12!33;UBERON:0003104!3.99e-11!238;UBERON:0009142!3.99e-11!238;UBERON:0000468!4.88e-10!659;UBERON:0000480!8.84e-10!626;UBERON:0000467!1.21e-09!625;UBERON:0000487!1.64e-09!22;UBERON:0006914!3.47e-09!25;UBERON:0001986!5.49e-08!18;UBERON:0004638!5.49e-08!18;UBERON:0004852!5.49e-08!18;UBERON:0000923!1.18e-07!604;UBERON:0005291!1.18e-07!604;UBERON:0006598!1.18e-07!604;UBERON:0002532!1.18e-07!604;UBERON:0000947!1.31e-07!21;UBERON:0010191!1.31e-07!21;UBERON:0002050!1.84e-07!605;UBERON:0005423!1.84e-07!605;UBERON:0000922!7.07e-07!612;UBERON:0000926!7.58e-07!448;UBERON:0004120!7.58e-07!448;UBERON:0006603!7.58e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;1.98e-12;56!UBERON:0001981;1.98e-12;56!UBERON:0004537;1.98e-12;56!UBERON:0001637;4.53e-12;42!UBERON:0003509;4.53e-12;42!UBERON:0004572;4.53e-12;42!UBERON:0003914;1.57e-11;74!UBERON:0004573;5.12e-11;33!UBERON:0004571;5.12e-11;33!UBERON:0002049;1.13e-10;75!UBERON:0007798;1.13e-10;75!UBERON:0000487;2.88e-10;22!UBERON:0000055;4.80e-10;65!UBERON:0006914;2.27e-09;25!UBERON:0004638;1.59e-08;18!UBERON:0001986;1.59e-08;18!UBERON:0004852;1.59e-08;18!UBERON:0000025;1.69e-08;93!UBERON:0000947;1.33e-07;21!UBERON:0010191;1.33e-07;21!UBERON:0000353;3.76e-07;15!UBERON:0006555;7.25e-07;15!UBERON:0004819;7.25e-07;15!UBERON:0001285;7.25e-07;15!UBERON:0007684;7.25e-07;15!UBERON:0001009;8.04e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,9.72e-25,78;UBERON:0007798,9.72e-25,78;UBERON:0003914,5.66e-23,117;UBERON:0007503,2.22e-22,78;UBERON:0004535,1.09e-21,109;UBERON:0000055,3.83e-20,68;UBERON:0001009,4.02e-20,112;UBERON:0000490,5.95e-20,148;UBERON:0004872,2.28e-19,83;UBERON:0007500,4.16e-19,59;UBERON:0001981,4.16e-19,59;UBERON:0004537,4.16e-19,59;UBERON:0006965,4.16e-19,59;UBERON:0002329,6.90e-19,71;UBERON:0003059,6.90e-19,71;UBERON:0007282,6.90e-19,71;UBERON:0004290,6.90e-19,71;UBERON:0009618,6.90e-19,71;UBERON:0007524,1.37e-18,73;UBERON:0003104,1.96e-18,160;UBERON:0009142,1.96e-18,160;UBERON:0003077,3.01e-18,72;UBERON:0007285,3.01e-18,72;UBERON:0001134,5.75e-18,62;UBERON:0002036,5.75e-18,62;UBERON:0003082,5.75e-18,62;UBERON:0001637,7.00e-17,42;UBERON:0003509,7.00e-17,42;UBERON:0004572,7.00e-17,42;UBERON:0002385,1.21e-16,64;UBERON:0001015,1.21e-16,64;UBERON:0000383,1.21e-16,64;UBERON:0005256,1.39e-16,122;UBERON:0000486,2.40e-16,83;UBERON:0002100,2.54e-16,199;UBERON:0000119,2.75e-16,309;UBERON:0000483,1.25e-15,306;UBERON:0004573,3.19e-12,33;UBERON:0004571,3.19e-12,33;UBERON:0000487,1.65e-10,22;UBERON:0000025,2.27e-10,192;UBERON:0004111,4.73e-10,240;UBERON:0006914,1.11e-09,25;UBERON:0004638,8.56e-09,18;UBERON:0001986,8.56e-09,18;UBERON:0004852,8.56e-09,18;UBERON:0000947,1.32e-07,21;UBERON:0010191,1.32e-07,21;UBERON:0000926,1.51e-07,315;UBERON:0004120,1.51e-07,315;UBERON:0006603,1.51e-07,315;UBERON:0000353,4.37e-07,15;UBERON:0004211,5.37e-07,15;UBERON:0009773,5.37e-07,15;UBERON:0001231,5.37e-07,15;UBERON:0001285,5.37e-07,15;UBERON:0007684,5.37e-07,15;UBERON:0004208,5.37e-07,15 | |||
|phase1_expression=1.81678379270557,1.2846031433459,1.55049844505568,0,0.446961094427288,0,2.53299878168311,3.15859936713415,1.30592814099919,3.19454117451962,5.58240934377942,1.09220686065086,1.05506791291381,4.95065411840187,4.30816588446291,8.0679017574213,1.80808358407193,3.65155045193687,2.43966399395253,7.01790031037691,7.14002419354885,9.40364164434263,6.01095572975219,4.79060487755095,4.6450776650077,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,2.68280343881454,4.09160197899297,3.2529523714611,7.52006865953834,2.462390822334,1.5905718941022,3.40644409211845,5.0103453096956,5.09977614163897,5.09441757020131,0.261958150995425,1.09288586487763,0.370784442784429,0.649094787309367,0.522389211897802,0.531831842075461,0,0,0,6.95668425783468,4.30117297553062,3.12426451446835,7.91431118693613,5.45349267072878,4.67700671298115,5.43386912995707,1.8089173141853,1.42306505074684,1.00416183829401,4.02829317109147,4.56163263431108,1.95249646038536,3.30896772311282,4.0507097394088,1.87529429396568,2.69435247151404,2.47745257063309,21.4643292452237,9.49265659568129,4.76324534219059,0,0,0.436094052142534,0.993943903390637,4.93858995491861,2.38336525463794,3.72887606973458,4.61068896857864,6.72813120170769,6.4049397437823,3.94668077467456,2.8008993185979,2.15537075311501,3.75962377160955,4.8434376846378,6.91411109375999,2.57753575017176,3.74592092196385,3.99330275081114,2.24173020827702,2.3486899728753,1.45685649931318,2.80901613404497,2.24569588380383,2.08818339430006,2.6864703105699,2.37600571456411,2.47266929278557,4.55080680969013,17.2468354035897,1.5150250255866,2.50237039743928,0.831192346452549,3.07284334616587,2.75839016219118,1.80285670687916,2.94923676216055,1.25572744982203,2.56268866582281,3.81477422087211,2.40072876867522,3.81294358182224,1.03056216018252,3.16398655763703,2.02531598689519,3.21542117031955,2.01947019395292,3.12969655383818,3.87950536365149,1.42003837006646,2.31729825923573,4.0694542154517,1.15956511897978,0.818238361772504,0.286804595389004,0.731842236777572,0.397589304964456,0.580969714347592,1.34759371519982,0,0.72995471815166,1.56449532329816,0.643240938192885,4.14404764057442,3.25057549622385,1.44375896333917,0.591534000199219,0.505754070234305,0.723033089650446,0.220587945464788,0.653638332277218,0.71181185733329,0.269662616320329,0.392442930250692,0.38474715694639,6.64339909162183,7.01208869017229,6.173610169971,2.94017422771084,0,0,0,0,0.614942192715568,3.08822058537346,0.548751427043128,0,0.301586917234893,1.11106134190236,1.3032332212413,6.23960871167747,2.88662684050547,3.014190529352,3.28744343860301,2.59859605969933,1.38895653772983,1.90254152234598,5.53143078571493,3.43394464837949,0.738651018262192,0.234004265139238,1.0404181360211,0.93733833986777,0.335964256397719,0.425325291727159,1.16426079513703,0.290633938513962,0,5.91195885475132,5.28290604079356,4.35389042635621,1.72943944100354,0.75745460055828,2.09543051164158,1.52795370223311,4.68869788840188,5.13217338068116,1.02827492703324,3.90445975197093,0.571652865261156,3.92458795208763,2.61576041299968,2.3468251462704,2.32689088364,14.3062578340753,1.690605505112,2.6593811658487,2.08014873822732,4.11531798819427,8.5109479213967,6.66055447540248,1.42977993658148,5.42621605391443,4.11620168390384,1.62868092146868,0,0.791951872933429,3.01439377059586,3.48613383440118,1.49959486773086,1.2162378064119,0,0,3.11512312139057,3.44585807502342,9.98458335285029,1.88215698667853,1.84928690295345,1.07436577943937,2.24170287987055,0,0,0,2.54094624222463,1.30139853857622,3.86644406388848,2.84777651068393,3.18969375826582,0,0,0,3.31267027641678,9.50323990013386,3.25518028439683,1.87173775377726,1.96271887676878,1.41932173530541,2.22568688486155,2.70851489754947,0,0,4.64957918974806,3.87175253937577,3.12781012085098,5.67823356641948,8.23544217146054,0,0,0,0.606255142892519,1.66435439510497,2.11673205330776,0.248107807818777,1.99500565274481,1.68396056659844,1.28139149255701,1.02341449813341,2.2519548960105,0,3.08419387605311,4.43904313282818,3.20295908453856,3.63478100428535,2.44041794765914,0.725156697549733,1.20303882181971,0.0920809889358963,4.01850568576124,3.27764102412091,3.01586154406675,2.70719767744447,1.46329140498388,10.1965469992991,5.84556898613043,1.68882606228601,5.68666920354483,2.89159298970077,3.02282282542995,6.16909010761157,8.39933956385944,8.02703638167765,2.29388645740534,3.3243040357149,4.02974558499921,0,0,2.3080511260475,5.24823433119529,2.27764876265012,0.412164046590889,3.20493126864202,3.05285149706176,0,0.650060246036521,4.82051789532479,2.70678011217942,4.1593126620954,3.53058451870098,1.51620229732984,3.75970857038958,4.0604674295984,3.23861184181183,3.91740956845644,0.99170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| |||
|short_description=p2@TUBB3 | |||
}} |
Latest revision as of 13:01, 18 September 2015
Short description: | p2@TUBB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TUBB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000556565_5end |
EntrezGene: | TUBB3 |
HGNC: | 20772 |
UniProt: | G3V542 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.97e-36 | 121 |
embryonic cell | 1.02e-24 | 250 |
muscle cell | 3.07e-21 | 55 |
muscle precursor cell | 6.01e-21 | 58 |
myoblast | 6.01e-21 | 58 |
multi-potent skeletal muscle stem cell | 6.01e-21 | 58 |
electrically responsive cell | 9.01e-20 | 61 |
electrically active cell | 9.01e-20 | 61 |
smooth muscle cell | 7.99e-17 | 43 |
smooth muscle myoblast | 7.99e-17 | 43 |
fibroblast | 2.13e-15 | 76 |
lining cell | 1.66e-14 | 58 |
barrier cell | 1.66e-14 | 58 |
vascular associated smooth muscle cell | 2.58e-12 | 32 |
meso-epithelial cell | 9.88e-11 | 45 |
endothelial cell | 1.32e-10 | 36 |
blood vessel endothelial cell | 8.56e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.56e-09 | 18 |
endothelial cell of vascular tree | 2.70e-08 | 24 |
epithelial cell of nephron | 5.37e-07 | 15 |
cardiocyte | 6.50e-07 | 16 |