FFCP PHASE1:Hg19::chr7:43417422..43417435,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23072 | |EntrezGene=23072 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22195 | |HGNC=22195 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=45bp_to_ENST00000481031_5end | |association_with_transcript=45bp_to_ENST00000481031_5end | ||
|cluster_id=chr7:43417422..43417435,+ | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_16_at_HECW1_5end | |description=CAGE_peak_16_at_HECW1_5end | ||
|id=chr7:43417422..43417435,+ | |id=chr7:43417422..43417435,+ | ||
|ontology_enrichment_celltype=CL:0000064!3.07e-34!3;CL:0005012!3.07e-34!3;CL:0000067!3.07e-34!3;CL:0002304!3.07e-34!3;CL:0000342!8.85e-13!1;CL:0002565!8.85e-13!1;CL:0000306!8.87e-12!4;CL:0002222!8.87e-12!4;CL:0002224!8.87e-12!4;CL:0000075!3.50e-10!27 | |ontology_enrichment_celltype=CL:0000064!3.07e-34!3;CL:0005012!3.07e-34!3;CL:0000067!3.07e-34!3;CL:0002304!3.07e-34!3;CL:0000342!8.85e-13!1;CL:0002565!8.85e-13!1;CL:0000306!8.87e-12!4;CL:0002222!8.87e-12!4;CL:0002224!8.87e-12!4;CL:0000075!3.50e-10!27 | ||
|ontology_enrichment_celltype_v019=CL:0000064;2.90e-38;3!CL:0000067;2.90e-38;3!CL:0005012;2.90e-38;3!CL:0002304;2.90e-38;3!CL:0000342;1.78e-29;1!CL:0002565;1.78e-29;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.19e-38,3;CL:0000067,3.19e-38,3;CL:0005012,3.19e-38,3;CL:0002304,3.19e-38,3;CL:0000342,1.33e-29,1;CL:0002565,1.33e-29,1 | |||
|ontology_enrichment_development_v019=UBERON:0003918;4.27e-26;10!UBERON:0007687;4.27e-26;10!UBERON:0003104;3.27e-09;31 | |||
|ontology_enrichment_disease=DOID:3193!7.61e-07!2;DOID:962!7.61e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!1.75e-48!11;UBERON:0000488!3.39e-45!4;UBERON:0000970!1.99e-43!20;UBERON:0002104!2.58e-41!21;UBERON:0000020!1.21e-37!23;UBERON:0000019!2.98e-36!19;UBERON:0000047!2.98e-36!19;UBERON:0004088!2.98e-36!19;UBERON:0003072!2.98e-36!19;UBERON:0003071!2.98e-36!19;UBERON:0004128!2.98e-36!19;UBERON:0001032!4.91e-36!24;UBERON:0004456!4.91e-36!24;UBERON:0001778!3.07e-34!3;UBERON:0001775!3.07e-34!3;UBERON:0001456!9.87e-33!21;UBERON:0002203!2.80e-30!6;UBERON:0001768!2.80e-30!6;UBERON:0001801!3.63e-28!14;UBERON:0005085!1.71e-23!29;UBERON:0002200!1.14e-16!11;UBERON:0006876!1.14e-16!11;UBERON:0001444!7.23e-14!48;UBERON:0003056!2.79e-13!61;UBERON:0002506!8.85e-13!1;UBERON:0001769!8.85e-13!1;UBERON:0001301!2.20e-12!1;UBERON:0002902!4.81e-12!1;UBERON:0009899!4.81e-12!1;UBERON:0010077!8.87e-12!4;UBERON:0005389!8.87e-12!4;UBERON:0000484!8.87e-12!4;UBERON:0002546!8.87e-12!4;UBERON:0000965!8.87e-12!4;UBERON:0001803!8.87e-12!4;UBERON:0003073!8.87e-12!4;UBERON:0005426!8.87e-12!4;UBERON:0000966!1.06e-09!5;UBERON:0005388!1.06e-09!5;UBERON:0001802!1.06e-09!5;UBERON:0003075!3.83e-09!86;UBERON:0007284!3.83e-09!86;UBERON:0002346!1.08e-08!90;UBERON:0002113!6.79e-07!27;UBERON:0003918!6.79e-07!27;UBERON:0005095!6.79e-07!27;UBERON:0007687!6.79e-07!27;UBERON:0003714!7.61e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;1.63e-63;4!UBERON:0002203;1.07e-42;6!UBERON:0001768;1.07e-42;6!UBERON:0002200;1.07e-42;6!UBERON:0001778;2.90e-38;3!UBERON:0001775;2.90e-38;3!UBERON:0002506;1.78e-29;1!UBERON:0001769;1.78e-29;1!UBERON:0007625;1.01e-23;11!UBERON:0006876;1.01e-23;11!UBERON:0001801;8.02e-19;14!UBERON:0000019;4.43e-14;19!UBERON:0000047;4.43e-14;19!UBERON:0004088;4.43e-14;19!UBERON:0010230;4.43e-14;19!UBERON:0000970;2.05e-13;20!UBERON:0002104;8.22e-13;21!UBERON:0001456;8.22e-13;21!UBERON:0000020;9.22e-12;23!UBERON:0002113;2.43e-11;24!UBERON:0011143;2.43e-11;24!UBERON:0001032;2.66e-11;24!UBERON:0004456;2.66e-11;24!UBERON:0000489;1.66e-09;29!UBERON:0006554;3.27e-09;30!UBERON:0001008;3.27e-09;30!UBERON:0010371;3.51e-09;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,1.46e-63,4;UBERON:0002203,9.96e-43,6;UBERON:0001768,9.96e-43,6;UBERON:0002200,9.96e-43,6;UBERON:0001778,3.19e-38,3;UBERON:0001775,3.19e-38,3;UBERON:0002506,1.33e-29,1;UBERON:0001769,1.33e-29,1;UBERON:0007625,9.75e-24,11;UBERON:0006876,9.75e-24,11;UBERON:0001801,7.78e-19,14;UBERON:0000019,2.01e-13,20;UBERON:0000047,2.01e-13,20;UBERON:0010312,2.01e-13,20;UBERON:0004088,2.01e-13,20;UBERON:0010230,2.01e-13,20;UBERON:0003072,2.01e-13,20;UBERON:0004128,2.01e-13,20;UBERON:0003071,2.01e-13,20;UBERON:0000970,8.05e-13,21;UBERON:0002104,8.05e-13,21;UBERON:0001456,2.85e-12,22;UBERON:0000020,2.61e-11,24;UBERON:0001032,2.61e-11,24;UBERON:0004456,2.61e-11,24;UBERON:0002113,1.65e-10,26;UBERON:0003918,1.65e-10,26;UBERON:0011143,1.65e-10,26;UBERON:0005095,1.65e-10,26;UBERON:0007687,1.65e-10,26;UBERON:0000489,6.34e-09,31;UBERON:0005085,6.52e-09,31 | |||
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|short_description=p16@HECW1 | |short_description=p16@HECW1 | ||
}} | }} |
Latest revision as of 15:26, 18 September 2015
Short description: | p16@HECW1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_HECW1_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 45bp_to_ENST00000481031_5end |
EntrezGene: | HECW1 |
HGNC: | 22195 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.19e-38 | 3 |
ciliated epithelial cell | 3.19e-38 | 3 |
multi-ciliated epithelial cell | 3.19e-38 | 3 |
non-pigmented ciliary epithelial cell | 3.19e-38 | 3 |
pigment cell (sensu Vertebrata) | 1.33e-29 | 1 |
iris pigment epithelial cell | 1.33e-29 | 1 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 1.46e-63 | 4 |
vasculature of eye | 9.96e-43 | 6 |
uvea | 9.96e-43 | 6 |
vasculature of head | 9.96e-43 | 6 |
ciliary epithelium | 3.19e-38 | 3 |
ciliary body | 3.19e-38 | 3 |
iris epithelium | 1.33e-29 | 1 |
iris | 1.33e-29 | 1 |
pigment epithelium of eye | 9.75e-24 | 11 |
vasculature of organ | 9.75e-24 | 11 |
anterior segment of eyeball | 7.78e-19 | 14 |
camera-type eye | 2.01e-13 | 20 |
simple eye | 2.01e-13 | 20 |
immature eye | 2.01e-13 | 20 |
ocular region | 2.01e-13 | 20 |
eyeball of camera-type eye | 2.01e-13 | 20 |
optic cup | 2.01e-13 | 20 |
optic vesicle | 2.01e-13 | 20 |
eye primordium | 2.01e-13 | 20 |
eye | 8.05e-13 | 21 |
visual system | 8.05e-13 | 21 |
face | 2.85e-12 | 22 |
sense organ | 2.61e-11 | 24 |
sensory system | 2.61e-11 | 24 |
entire sense organ system | 2.61e-11 | 24 |
kidney | 1.65e-10 | 26 |
kidney mesenchyme | 1.65e-10 | 26 |
upper urinary tract | 1.65e-10 | 26 |
kidney rudiment | 1.65e-10 | 26 |
kidney field | 1.65e-10 | 26 |
cavitated compound organ | 6.34e-09 | 31 |
ectodermal placode | 6.52e-09 | 31 |