FFCP PHASE1:Hg19::chr15:67358269..67358272,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4088 | |EntrezGene=4088 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6769 | |HGNC=6769 | ||
|TSSclassifier=strong | |||
|UniProt=P84022,Q9P0T0 | |UniProt=P84022,Q9P0T0 | ||
|association_with_transcript=74bp_to_NM_005902,uc002aqj.2_5end | |association_with_transcript=74bp_to_NM_005902,uc002aqj.2_5end | ||
|cluster_id=chr15:67358269..67358272,+ | |||
|description=CAGE_peak_15_at_SMAD3_5end | |description=CAGE_peak_15_at_SMAD3_5end | ||
|id=chr15:67358269..67358272,+ | |id=chr15:67358269..67358272,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.28e-10!42;CL:0000860!2.51e-09!45 | |ontology_enrichment_celltype=CL:0002057!4.28e-10!42;CL:0000860!2.51e-09!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.37e-07;33!CL:0002057;2.37e-07;33!CL:0002595;8.59e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.17e-09,42;CL:0002057,2.17e-09,42;CL:0000473,1.02e-07,48;CL:0000234,1.02e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;1.59e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.90e-09!118;UBERON:0001981!2.71e-08!60;UBERON:0007500!2.71e-08!60;UBERON:0004537!2.71e-08!60;UBERON:0006965!2.71e-08!60;UBERON:0000055!2.75e-08!69;UBERON:0003081!4.83e-08!216;UBERON:0001637!5.79e-07!42;UBERON:0003509!5.79e-07!42;UBERON:0004572!5.79e-07!42;UBERON:0000926!6.62e-07!448;UBERON:0004120!6.62e-07!448;UBERON:0006603!6.62e-07!448;UBERON:0004872!9.75e-07!84 | |ontology_enrichment_uberon=UBERON:0003914!1.90e-09!118;UBERON:0001981!2.71e-08!60;UBERON:0007500!2.71e-08!60;UBERON:0004537!2.71e-08!60;UBERON:0006965!2.71e-08!60;UBERON:0000055!2.75e-08!69;UBERON:0003081!4.83e-08!216;UBERON:0001637!5.79e-07!42;UBERON:0003509!5.79e-07!42;UBERON:0004572!5.79e-07!42;UBERON:0000926!6.62e-07!448;UBERON:0004120!6.62e-07!448;UBERON:0006603!6.62e-07!448;UBERON:0004872!9.75e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0003513;3.53e-07;7!UBERON:0003834;8.59e-07;5!UBERON:0001533;8.59e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.89e-10,68;UBERON:0003081,9.38e-10,203;UBERON:0007500,3.27e-09,59;UBERON:0001981,3.27e-09,59;UBERON:0004537,3.27e-09,59;UBERON:0006965,3.27e-09,59;UBERON:0001637,7.11e-09,42;UBERON:0003509,7.11e-09,42;UBERON:0004572,7.11e-09,42;UBERON:0002049,2.31e-08,78;UBERON:0007798,2.31e-08,78;UBERON:0004872,1.76e-07,83;UBERON:0003914,2.72e-07,117;UBERON:0004535,4.03e-07,109;UBERON:0003513,4.81e-07,7;UBERON:0002204,8.05e-07,167;UBERON:0001009,9.22e-07,112 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,1.0007329835313,0,0,0,0.631719873426831,0,0.245733936501509,0,0.218441372130172,0,0.247532705920093,1.65698687863958,0.672325146451775,1.20538905604795,0.730310090387373,0.487932798790507,0.123121058076788,1.02000345622126,0.313454721478088,0,0.136874425072884,0,0.61130724598361,0.821005894499457,0.393553906568396,0.786728553697808,0.383829398097213,1.85779347979291,0,0.6024118375565,0.369754010166788,0.154934401160603,0,0,3.32397245119126,2.60707781711184,3.68918480216948,0,0,0.257575567634187,1.30858414901608,0,0.727752183563449,1.62700325833979,2.05583944010913,0.619412741790207,0.28769239232215,0.768482119587302,0,2.06847408441971,1.29096936716765,1.35426486594342,1.12945403725563,1.91034305040492,0.224723484445085,0.612167784741805,0.962787081228281,1.27867425159808,0.329851300186716,1.79517291859469,1.27867425159808,0.870627715885752,0,1.24564449799115,0.251248665256743,0.521482918420201,0.65156653411535,0,0.736555271975129,1.26584954976354,0.845021145247767,0.637812899895131,0.838634582033504,0.561643155732475,0.600707571366025,0.64290234678832,0.285012743741249,0.19891667719909,0.730656615058536,0,0,0,0,0,0.574752439954483,0,0,2.27685187643779,1.17447437874188,0.382273228125229,1.32171328579026,0.560508562981536,0,0.196709770113833,0.786021525498329,0.616804496998528,0,0.32592226663359,0.473447805734733,0,0.334231370655521,0.294605907474837,0.221533894583621,0,0,0.520237390239513,0.657751618414705,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0.383220493601921,0,1.01207876807801,0,0,0,0.150575119077773,0.383959833463255,0,0,0,0.604820229674197,0,0.144824403882799,0,0,0.383587685530591,0,0.50133791063589,0,0,0,0.378139268656271,0.443458794925128,0.263504357079378,0.261958150995425,0.728590576585084,1.48313777113772,0,0,0,0,0,0.371457501329565,0.39752481473341,1.72046919021225,0.694281003215189,0.56530794192401,1.25849830862972,1.6507082516404,1.04497483268405,0.258416759169329,1.42306505074684,0,1.61131726843659,0,1.95249646038536,2.20597848207521,0,0.357198913136319,0.44905874525234,0.563057402416611,1.53316637465883,0.949265659568129,0.916008719652036,0,0,0.872188104285069,0.993943903390637,0.12663051166458,0.397227542439656,0,0,1.12135520028461,3.20246987189115,0.98667019366864,0.622422070799533,0.404132016209064,0.326923806226917,0.151357427644931,0,0,0.624320153660641,0.570471821544449,0.896692083310806,0.117434498643765,0,0.421352420106746,0.408308342509787,0.491337269247072,0.413303124703062,0,0.494533858557114,1.82032272387605,1.43723628363248,0.505008341862199,0.750711119231785,0,0.438977620880838,0.30648779579902,0.901428353439581,0.453728732640084,0.358779271377724,0.213557388818567,1.05965950579781,0.900273288253207,0.824420233907511,0,0.18611685633159,0.337552664482532,0.292311015483596,0,0.552299391853796,0.323292113637624,0,0.302256294682921,0,0.386521706326594,0.545492241181669,0.573609190778008,0.121973706129595,0,0.116193942869518,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0.721879481669586,0.236613600079688,0,0,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0.38474715694639,1.4763109092493,0,0.8231480226628,1.47008711385542,1.26755034821831,0,0.590789906681404,0,0.122988438543114,0,0,0,0.301586917234893,0.462942225792648,0.651616610620649,1.03993478527958,0,0.231860809950154,1.17408694235822,0.866198686566443,0,0,0,2.57545848628462,0,0,0,0,0.335964256397719,0.425325291727159,0.268675568108545,0.290633938513962,0,0,0.088048434013226,0.414656231081544,0,0.37872730027914,0.063497894292169,0,1.17217447210047,1.71072446022705,0,0,0.571652865261156,0.224262168690721,0.43596006883328,0.22001485746285,1.42198887333556,0,0,0.531876233169741,1.04007436911366,0.514414748524284,0,0.532844358032199,0.142977993658148,0.542621605391443,0,0.977208552881205,0.355391948742546,0,0.301439377059586,0.871533458600294,0.699810938274399,0,0,0,0.239624855491583,0,1.42636905040718,0.289562613335158,0.205476322550383,0.537182889719687,0.896681151948218,0.197030760201927,0.431255149719035,0.898401253958239,0,0,0,0,1.27587750330633,0,2.99161459204025,0,0.613457458595699,0.500170521059677,0.542530047399471,0.623912584592421,0.178428988797162,0.473107245101804,0.702848489956279,0,0,2.0694614258501,0,1.10621501125022,0.521301686808497,0.587403472388222,0,0.413536052245775,0.431428401637234,0.853820462427555,0,0,0.907170879989041,0.248107807818777,0,0,0.512556597022804,0.511707249066704,0.160853921143607,0,0.154209693802656,0.355123450626254,0.328508624055237,0,0.697262270759755,0.241718899183244,0.200506470303285,0.0920809889358963,0.114814448164607,0.728364672026868,1.44236856455367,0.902399225814824,0.308061348417659,0.784349769176855,1.46139224653261,0.73886140225013,1.13733384070897,0.510281115829547,0,0,1.08378575017541,0.501689773854853,0.509752546090077,0.831076008928724,0.671624264166535,0,0,0.256450125116389,0,0,0.206082023295445,0,0,0,0,0,0,0.308097234229289,0.76751837363064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| ||
|short_description=p15@SMAD3 | |short_description=p15@SMAD3 | ||
}} | }} |
Latest revision as of 17:01, 18 September 2015
Short description: | p15@SMAD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SMAD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 74bp_to_NM_005902, uc002aqj.2_5end |
EntrezGene: | SMAD3 |
HGNC: | 6769 |
UniProt: | P84022Q9P0T0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.17e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.17e-09 | 42 |
defensive cell | 1.02e-07 | 48 |
phagocyte | 1.02e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.89e-10 | 68 |
lateral plate mesoderm | 9.38e-10 | 203 |
epithelial tube open at both ends | 3.27e-09 | 59 |
blood vessel | 3.27e-09 | 59 |
blood vasculature | 3.27e-09 | 59 |
vascular cord | 3.27e-09 | 59 |
artery | 7.11e-09 | 42 |
arterial blood vessel | 7.11e-09 | 42 |
arterial system | 7.11e-09 | 42 |
vasculature | 2.31e-08 | 78 |
vascular system | 2.31e-08 | 78 |
splanchnic layer of lateral plate mesoderm | 1.76e-07 | 83 |
epithelial tube | 2.72e-07 | 117 |
cardiovascular system | 4.03e-07 | 109 |
trunk blood vessel | 4.81e-07 | 7 |
musculoskeletal system | 8.05e-07 | 167 |
circulatory system | 9.22e-07 | 112 |